Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->GLK1(2)                                                                      --------->At4g35610                                                                      <---------At4g35610                                                                      --------->ZAT2                                                                      <---------ZAT2                                                                 --------->ZAT2--------->ARR14(2)                                                                 --------->At4g35610                --------->O2                                     <---------ZAT2<---------GLK1(2)                --------->ANAC46  <---------ZAT14                <---------At4g35610 ----------------              <---------ALFIN1    --------->ZAT18           <---------HSFB2a(2)<---------ARR14(2)             <---------REM1(2)  <---------GLK1(1)           --------->HSFB2a(2)<---------ARR11(3)     <---------ANAC58<---------ANAC46                   <---------ANAC58       --------->ARR11(3)     <---------ANAC58----------->GT1                    <---------ANAC58     ----------->ARR10     -- ----------DOF2 <---------O2  <------ZmHOX2a(1)         <---------ANAC46     <---------ATHB12    <---   tcctttgccttgctctccacgtagggtatataggagttcacgaccaagtctctgtgtttcttgtcgaagctcagctccaaagattctcgttgaatgtttc  5857500                                                           <---------ALFIN1                                   <---------YAB1       --------->AtMYB61                                <---------YAB1     <---------MYB52(2)            --------->ETT(2)      <----------DOF2         <---------ZAT6      --------->ANAC58          --------------------->WRI1 ----->WRI1              --------->YAB1           --------->ANAC58       >>>>>>>>>>>>>>>>>LFY --------->HVH21         --------->TOE2(3)   --------->HSFB2a(2)  --------->At4g35610 ------LBD16            --------->MYB46(3)   <---------HSFB2a(2)  <---------At4g35610            ----   cctgatagctttgtccatactcttcaaccatagtattattcttgtttctagcaagaaacctccacttgagcttaatgccattgtagacatcggagacaac  5857600                                                             <<<<<<<GRF7                                                            --------->MYB52(1)                                                           ----------->HVH21                                                   <--------HAHB4                                                   --------->ATHB51                                                   <---------ICU4                                   <                        <----------DOF2        <-----------------AGL2                               -           ----------->GT1                     ----------------->AGL3                        --------          <---------TOE2(3)       --------->LBD16 <---------YAB1  --------->GLK1(2)          --------          <---------TOE1(3)      --------->ANAC46 --------->ICU4 <---------GLK1(2)         --------->CCA1(2) ----->AtMYB61  <-----------GT1 <---------LBD16----------------->AGL2                    --------->CCA1(2)   ctctccatcgctaaggtataacttgactttcttctccgcagggtctctagccataattagcctgacagaatttggacttatcttggtggagagataagcc  5857700       <---------ANAC58       <---------ANAC46       <---------ANAC58      <-------TEIL   --------->ZAT2    <------NtERF2  <------ZmHOX2a(1)   <---------At4g35610  <---------KAN4(2)   --------->At4g35610  ---------->TaMYB80   <---------ZAT2   --------->HSFB2a(2) ---------At4g35610 <---------HSFB2a(2)                 <---------ANAC58 -------->At4g35610<---------LBD16  =================HOX2a_HOX2a ->ANAC58  --------->DAG2        --------->HSFB2a(2)    <---------ANAC58               <------ZmHOX2a(1) ->ANAC58 ---------->DOF2   <-------TEIL      ------>ZmHOX2a(2)                  <------NtERF2  -----   tgagcagctgcgtaaagctcgtcgggaatatacatcgaggacatttgatcgatggtaagcgtgagagtcgatgaacgagagccagcgaaggacttgagat  5857800                                                                         --------->ATHB12                                           --------->YAB1                -------->ATHB1                                           <---------ICU4      <---------bZIP60(2)                                           -------->ATHB1      <---------ANAC58                                           --------->ATHB12    <---------ANAC55(1)                                          --------->ICU4       <---------ANAC46  <---------ANAC58                                          <---------ATHB12     <---------ANAC55(2)                                          <---------YAB1       <---------ANAC58  <---------ANAC46                               --------->YAB1                  --------->ANAC55(2)                               <---------ICU4                <---------TGA2(2)   <---------ANAC58                               <--------ATHB1               ----------->TGA1     <---------ANAC55(2)                               --------->ATHB51           <---------ICU4 <---------ICU4                              <---------ATHB51   <---------ANAC58 --------->ARR14(2)                              --------->ICU4     <---------ANAC46 ------->TEIL   --------->ANAC55(2)                           ------------>ATHB5    <---------ANAC58 <---------ARR14(2)                        ------->PIF5----------->GT1      <---------YAB1 <---------ATHB12                        <-------PIF5<---------ZAT6     --------->YAB1------------>ATHB5 ---->CCA1(2)          <---------ANAC46 --------->WOX13(1)--------->YAB1<---------YAB1   aagagaaaacgaagttttgaactggacgtggaataattgtgttaatcattggcttgattatcatgacgtatcccatcattgatgcgtaagtagagaacat  5857900                                                                                         <---------TOE1(3)                                                                              ----------->RAV1(2)                                                    <------MYB46(1)         <---------ANAC55(1)                                                    <------MYB83            <---------ANAC58                                                   <---------MYB46(3)       <---------ANAC46                                                   --------->MYB59          <---------ANAC58               --------->ARR11(3)                  <---------AtMYB61     <---------MYB52(1)               <---------ARR11(3)              <------MYB83            ===================RAV              --------->GLK1(1)                <------MYB46(1)         <---------MYB46(3)<---------TOE2(3)     <------ZmHOX2a(1)                        --------->MYB59          <-----------RAV1(1)-----------  <-----------RAV1(2)                         <---------TOE2(3)   ---------->DOF2     <----------DOF2 <-------TEIL <---------GLK1(1)          <---------TOE2(3)   <----------DOF2<---------RAP2.6(2)   agatgcaggagaagggatatctctagagaacaccatcgtttttgagattaggtttggtcgctccttttcaaagctgttgcgtctgaggctttaggttaaa  5858000                                            <---------ANAC58               <------ZmHOX2a(2)                                            <------MYB83                  --------->ARR14(2)                     <---------AHL20(2)     <------MYB46(1)               <-----------HVH21                ------------>CBF           <---------AtMYB61              <---------ARR14(2)              <---------ETT(2)             --------->MYB46(2)        <-----------HVH21    --------->AHL20(2)                     <---------MYB46(3)       <---------ANAC46    <---------AHL20(1)                <---------TOE2(3)             <---------ANAC58    <---------AHL20(2)                <---------TOE1(3) ------------>CBF<---------DEAR3(2)    --------->AHL20(1)          <---------TOE2(3)   <----------DOF2 <---------ANAC58          <------   --------->AHL20(2)--------->AHL20(2)    --------->MYB111(1) <-----------RAV1(1)   <-----------GT1 >GT1     <---------TOE2(3) <------------CBF<---------ANAC58<-----------RAV1(1)   <----------DOF2   ctaaattttatttatgtagacaattaaacgtattgagattagggtttggtgtctctttttcaatgttgttgcgtcggatcagggcttttacttcttcttt  5858100                                        <---------AHL20(2)                                        --------->AHL20(2)                                        <-----------TBP                                   --------->AHL20(2)                                   <---------AHL20(2)                               <---------AHL20(2)        --------->YAB1         --------->AHL20(2)        <---------ICU4        --------->AHL20(2)                         <----------DOF2       --------->ICU4         <---------AHL20(1)                         --------------->AGL15     >>>>>>>>>GT-2            --------->AHL20(1)                         <---------------AGL15   <---   <---------MYB52(1)----------->GT1  <-----------TBP<----------DOF2<----------DOF2        <---------AHL20(2)  ----------->GT1<----------DOF2   <---------AHL20(1)------>ZmHOX2a(1)  <-----------------AGL2  <---- ----DOF2 <---------YAB1      <---------AHL20(2)  ---------->ID1<---------GLK1(2)       ----------->GT1   ttttcggtaattatcagggcttttagttaaaatttattttatttatatagttgtccttttatttcaaattcttttctttttctggttaagtagtttattt  5858200                                                            --------->AHL20(1)                                                            <---------AHL20(1)                                                            <---------AHL20(2)                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                       --------->AHL20(1)                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                   <--------HAHB4                                                   --------->YAB1                              --------->AHL20(2)  <---------YAB1                            <-----------TBP       <---------AHL20(2)                      <-----------GT1      --------->ARR11(3)                          ----------->GT1                    <---------ICU4    --------->At5g28300  --------->YAB1            <-------GAMYB         ---------->DOF2  <----------DOF2  <---------ARR11(3)             --------->ARR11(3) --------GT1     --------->AHL20(2)  ----------->GT1  <---------AHL20(2)  <---------ARR11(3) -------GT1      --------->YAB1     --------->ANAC46  --------->AHL20(2) <---------CCA1(2)   tcccttgcgataaaagaaataatatttcctttttatatacggtaaaatctctataattaaattatattctggtatatatctatttgcagttgtaaatctc  5858300                   --------->AHL20(2)                   <---------AHL20(2)                  --------->AHL20(2)               --------->AHL20(2)              <---------YAB1              <---------AHL20(2)             --------->YAB1           --------->ARR11(3)               <---------YAB1           <---------ARR11(3)             <---------AHL20(2)           <---------AHL20(2)            <---------AHL20(2)           --------->AHL20(2)            --------->AHL20(2)           --------->AHL20(1)        <---------AHL20(2)           <---------AHL20(1)        <---------YAB1                                  ================          --------->AHL20(2)      --------->AHL20(1)                                 --------------->AGL15      --------->AHL20(2)          <---------AHL20(1)                                 --------->TOE1(3)     <---------AHL20(2)        --------->AHL20(2)    <---------ZAT6            --------->YAB1      --     --------->AHL20(2)<-----------GT1--------->AHL20(2)       --------->AHL20(2)    --------->TOE2(3)   tgactatttaaaatatattatttaattaccaaaaaaaatattatttattatagtagtgtaattgaaaaaatacaaattgaaacataaccttaaatatgaa  5858400  Previous    Next  AGI:  At5g17740.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46634.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 5856237    to: 5857936    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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