Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <------ZmHOX2a(2)                                                   <---------ARR14(2)                                                   --------->ARR14(2)                                             --------->ANAC58                                          <---------ZAT18                                         --------->ANAC46                                         --------->ANAC58                                         --------->ANAC58                               ------->TEIL        ------>MYB83  <---------------AGL15  --------->ANAC58                          <-----------GT1        ------>MYB46(1)               ---------->CDC5------>ZmHOX2a(2)             <---------ICU4        -------->P    <----------DOF2 <---------WRKY38(1)                   --------->LBD16      --------->AtMYB61    ---------->DOF2------->GAMYB        --------->TOE1(3)--------->YAB1     xxxxxxxxxxxxxxxx>smallRNA(i)  <---------At4g35610        <---------At4g35610  --------->YAB1   xxxxxxxxxxxxxxxx>smallRNA(i)    --------->At4g35610        --------->At4g35610 --------->ICU4    <   attcaagaccaactctgtgtgtttcttttcaaagctaagctcaacgcactcccgatcggggtttagcttaaaatgttccccaaaataatgaaccatattg  5853600                             <---------WRKY18(1)                            --------->WRKY12                            ----------->HVH21                          ============================MYC_MYB                          <---------O2                          --------->TGA1a                          <---------TGA1a             --------->LBD16                        <---------ALFIN1             --------->ANAC46                     --------->ANAC58             <---------ARR14(2)                     --------->DEAR3(1)           --------->ARR14(2)                     --------->ANAC46            --------->GLK1(1)                     ===============MYC_MYB      <---------GLK1(1)                     ------->GAMYB              --------->ARR14(2)                     --------->ANAC58           --------->ARR11(3)                     --------->RAP2.6(2)        <---------ARR14(2)                    --------->MYB46(3)          <---------ARR11(3)            ----------->GT1                  <---------ARR14(2)         <--------P                     <---------ANAC46                  --------->ARR14(2)    <---------ANAC58                  <---------ZAT14                  --------->MYB52(1)    <---------ANAC58                  --------->ZAT14                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                --------->At4g35610xxxxxxxxxxx        <-----------HVH21 --------->O2  <---------ANAC46      --------->AtMYB61        <---------TOE2(3) ---------YAB1 --------->ANAC46 --------->TOE2(3)--------->CCA1(2)  ------>ZmHOX2a(1) <-----------GT1   ctcttattgctgtcaacacaaaaccgccacttgacctcaatgccttggtagatatccgagacaacctctcctacgctgaagtgtatattgacgtttttct  5853700                             --------->LBD16                             <xxxxxxxxxxxxxxxxsmallRNA(i)                            xxxxxxxxxxxxxxxx>smallRNA(i)                           <---------LBD16                         <---------ARR14(2)                         --------->ARR14(2)                        <----------DOF2                                    ---------->DOF2                       <---------DAG2                                    --------->LBD16               <------ZmHOX2a(2)                                        <---------ANAC46              --------->ARR14(2)        <---------WRKY18(1)            <---------LBD16              <---------ARR11(3)       --------->WRKY38(1)          --------->At4g35610              --------->ARR11(3)       ----------->HVH21           --------->DEAR3(1)              <---------ARR14(2)       --------->WRKY12          <---------At4g35610              ---             --------->GLK1(1)        <---------WOX13(1)         --------->At4g35610              <--             <---------GLK1(1) <----------DOF2                   <xxxxxxxxxxxxxxxxsmallRNA(i)    <--- --------->ZAT14 --------->TOE1(3)   <-------GAMYB               --------->ZAT2          xxxxxxxxxxxx <---------ZAT18 --------->TOE2(3)  <---------MYB46(3)           <---------ZAT2        <xxxxxxxxxxxxx <---------ZAT14------>ZmHOX2a(2)  <---------AtMYB61         --------->TOE1(3)        <-----------GT1 xxxxx>smallRNA(i)------>ZmHOX2a(1)<---------TOE2(3)        ----------->RAV1(2)  ----------->GT1 <---   cactgcggtctctagagatccttagcctttccgcgttgtggttgaccttggtagaaatataaacctgagcagccccgtagagctcgttatacatcccatt  5853800                                                 ---------->DOF2        <---------WRKY38(1)                    --------->ANAC58        <---------WRKY12                       --------->ANAC58                                  <--- ------------>AGL15                         --------->ZAT18                               --------->ALFIN1 -------------AGL15                      <---------ANAC46           <------ZmHOX2a(2)  <---------DEAR3(1) --------------AGL1  <---------ANAC58    <---------ANAC58          <---------ARR11(3)  <---------AtMYB61 xxxxxxxxxxx>smallRNA(i2)                <---------ANAC58          --------->ARR11(3)  --------->ALFIN1 xxxsmallRNA(i)--------->YAB1       <---------ANAC46         --------->CCA1(2)       ------->GAMYB --------------AGL2  <---------ANAC58  <---------ZAT14    <---------TOE2(3)       --------->MYB52(1)   cttgatatggtcatcgatgatgagcgtgagagtcgatggagtagagtgcaagaaagaattgagataagagatcatgtagttttgtaacggaggtggaatt  5853900                               <---------ARR14(2)                               ------->TEIL                               --------->ARR14(2)                            <---------bZIP60(2)                            <---------ANAC46                            --------->ANAC55(2)                            <---------ANAC55(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                            <---------ANAC55(1)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                            <---------ANAC58       --------->At4g35610                            <---------ANAC58  <---------ANAC58                          <---------TGA2(2)   <---------ANAC58                         ----------->TGA1     <---------ANAC46                   --------->GLK1(1)                       --------->YAB1     --------->YAB1                        <---------ARR11(3)      --------->ANAC58 <---------ICU4    <---------ATHB12            --------->ANAC58      --------->ANAC58<---------YAB1  <---------WRKY12               --------->ANAC58 --------->At4g35610  --------->ICU4<-----------HVH21       --------->MYB52(1)  --------->ARR11(3) <---------At4g35610<---------ICU4  --------->LBD16<---------At4g35610         --------->HSFB2a(1) --------HVH21      --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <---------HSFB2a(1)   gtcatctcaagaaatggtttgatcatcatgacgtatcccgtcaatgatgcgtaggctgagacaaacggtgcaagcgaaggaagatttctaagagaaaaca  5854000                          ------->TEIL                   --------->MYB46(3)                  --------->ANAC58                 ----------->RAV1(1)                                                 <--------HAHB4                 ------->TEIL                                         --------->ALFIN1              --------->ANAC58                                      --------->ALFIN1 <---------ICU4              --------->ANAC58                                      <-----------RAV1(1)            --         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           ----------->GT1              --------->ATHB12     --------->ATHB12------>MYB46(1)--------->ANAC58 --------->MYB111(2)   --------->ALFIN1        --    <---------YAB1--------->ANAC58  --------->ANAC46 <---------MYB46(3)  <---------ANAC46     -------   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)---------->DOF2<-------GAMYB------->MYC3     <---------ATHB12  <---------At4g35610------>MYB83   --------->ANAC58<--------P     <-------MYC3     --------->ICU4<--   tcgctgatgatttgaaacgcaccaaatgtaccaaaaacactcaaagtagaagaggttgttgttaatacatgtgtggggagtagctaatcatttatcttca  5854100 <---------------AGL15  --------->bZIP60(1) ------->AHL20(2)       <---------bZIP60(1)           ---------->DOF2                          ------ ------->YAB1     --------->ICU4              <---------ARR11(3)                       <---------MYB46(3) ----->CBF   ----------->GT1                  --------->ARR11(3)                  ------>ZmHOX2a(1) -------ATHB12 --------->AHL20(2)          <---------GLK1(2)                     --------->TOE2(3)  <   ataatatttgtggtaatgtaaatatgaagtcatatatgatatatggattatcttcacaaagaaaacgaagttccattttctgtccttagtagttgacaac  5854200                                                                         <---------WOX13(1)                                                                        <------------CBF                                                           <---------AHL20(1)            --------->ANAC55(2)                                                           --------->AHL20(1)            <---------ANAC55(1)                          <---------AHL20(1)               <---------ARR11(3)            <---------ANAC46                          <---------AHL20(2)               --------->ARR11(3)            <---------ANAC58                          --------->AHL20(2)              --------->RVE1(1)       <------ZmHOX2a(2)                          --------->AHL20(1)              --------->CCA1(1)      --------->ARR11(3)                         --------->AHL20(2)             --------->YAB1 --------->ATHB51  <---------ANAC58                     --------->AHL20(2)               --------->ICU4  <---------AHL20(2)<-------TEIL                     <---------AHL20(2)------------>CBF --------->AHL20(2)       <---------ARR11(3) -->P    <-----------GT1 <---------AHL20(2)  ------------>CBF      <---------AHL20(2) <-------MYC3 ---------CCA1(2)   <---------YAB1    <-----------GT1 <---------YAB1  <---------YAB1  ------->MYC3   ccctatctaatttacatatgttattaattaaatttggatttttcaataccaatgtcattaatatcttattttataattgataagatcacatgcgtgtcaa  5854300                       <---------AHL20(2)                       --------->AHL20(2)                   <---------YAB1                 --------->YAB1                 <-----------GT1              <---------ICU4              --------->YAB1                                                               <---------ANAC58             <---------YAB1                                                                <---------ANAC58             --------->ICU4                                                            <---------GLK1(1)            <---------AHL20(2)                                                         --------->GLK1(1)            <---------AHL20(1)                                                        <---------ARR11(3)            --------->AHL20(1)                                                        --------->ARR11(3)            --------->AHL20(2)   >>>>>>>>>GATA-4                                    <---------TOE2(3)           --------->YAB1        <---------ARR14(2)                                 <---------YAB1           <---------ICU4        >>>>>>>>>GATA-2                              <---------AHL20(2)          --------->ICU4         >>>>>>>>>GATA-3                              --------->AHL20(2)          <---------YAB1<---------AHL20(2)         --------->AHL20(2)        <---------AHL20(2)      --------->At5g28300        >>>>>>>>>GATA-1--------->YAB1               --------->AHL20(2)     ----------->GT1   <---------AHL20(1)      <---------YAB1                <---------AHL20(1)------   aataatgctgtaattataattacaatttttttgtggattcaacacatatatcataaaatgtttgagaacataagtttaataaaattaagatttccttgaa  5854400                                                                    <-----------GT1                                                                   <---------ICU4                                                      <---------AHL20(1)                                                      <---------ARR11(3)                           <---------AHL20(2)         --------->AHL20(1)                        <---------AHL20(1) <---------MYB59         --------->YAB1                  --------->YAB1          <---------ANAC55(2)  --------->AHL20(2)              ------                 <---------YAB1      <---------------AtSPL3   --------->AHL20(2)               ------    ---------->DOF2     --------->AHL20(1)--------->ANAC55(2) <---------AHL20(2)               ------  <---------AHL20(2) --------->AHL20(2)  <-------TEIL --------->ARR11(3)      <---------TOE2(3)<-----  --------->AHL20(2)<---------YAB1   <---------------AtSPL8 <----------DOF2   <---------TOE1(3)<----- ---->DOF2   <----------DOF2     ---------->DOF2   --------->AHL20(2)    <----------DOF2     --------   agaattaaaagttttctttatgataatatataatggaaagaagtacataactaaaaaatattctttaaattatcacttttgaggttttgtttttaaaaag  5854500  Previous    Next  AGI:  At5g17730.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46634.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 5852500    to: 5854001    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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