Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <-----------HVH21         --------->TOE1(3)                           --------->KAN4(2)         <---------ATHB12            --------->ANAC58                          <---------KAN4(1)   <---------AHL20(2)                 --------->ANAC46                          --------->HSFB2a(1)<---------AHL20(2)                  --------->ANAC58     --------->ATHB12     <---------HSFB2a(1)--------->AHL20(2)           --------->ANAC58          <     <---------ICU4      ------->TEIL        --------->AHL20(1)           --------->ANAC58          - ------>ZmHOX2a(1)      <---------DOF5.7(2)  <---------AHL20(1)       --------->ANAC58             <- ------->YAB1         ----------->HVH21----------->GT1---------->DOF2 --------->ANAC58        <------   atcctattcattgctctaattcatgtgaacgttccttcagagggtaatataatcaataaagcttaaaaatttaagcaaacaacaagcaattctaaattac  5841300                               --------->MYB52(1)                             <---------MYB52(2)                           ------>MYB46(1)                                                          <                      <-----------GT1                                                 --------->TOE2(3)       --------->ARR14(2)  ------>MYB83             ---------->DOF2                   --------->TOE1(3)       <---------ARR14(2)<---------MYB46(2)       --------->ANAC58                   ----------->RAV1(2)   ----------------->AGL1--------->DEAR3(1)       --------->ANAC58            ----------->GT1       < ---------ARR14(2)   <---------ATHB12         --------->ANAC46           <---------RAP2.6(3)        < -------->ARR14(2)   --------->MYB46(3)      ------->GAMYB              --------->RAP2.6(2)         - --------CCA1(2)--------->TOE2(3)         <-----------GT1             <---------At4g35610          <- -----GT1       --------->TOE1(3)    --------->AHL20(2)               --------->At4g35610    <-------   catatcccaaattcgaaaccctaatcaccgaactaacaatgaaataacccccaagaaagttgaacagaagtgagccgaaatcgaaaaacctgaacttcgg  5841400                                           --------->ANAC58                                         --------->LBD16             --------->DEAR3(1)        <---------HSFB2a(2)             --------->AtMYB61         --------->HSFB2a(2)   <---------TOE1(2)                  <---------LBD16 <---------TOE1(1)      --------->GLK1(1) ---------ANAC58                 <---------GLK1(2)    <---------TOE2(1)      <---------GLK1(1) ---------ANAC58                --------->At4g35610  --------->SPL7         --------->ARR14(2) ---------MYB46(3)      <---------MYB52(1) --------->ANAC58                 <---------ARR14(2) -------->MYB52(2)     <-----------HVH21--------->LBD16                    <------ZmHOX2a(1) ------TEIL  <---------ALFIN1   <---------ZAT2---------->DOF2      --------->At4g35610          ----- --LBD16  <---------ALFIN1      <---------At4g35610<---------SPL7  <---------At4g35610       --------   gttcgttcgattccacctccgtctccgtcgtctcagcttctcccgaagcaaagggtacgaggtttagtaagcggagaggatagccgctagagacagaccg  5841500                                                     --------->ANAC46                                                     --------->ANAC55(2)                                                     --------->ANAC58                                                     --------->ANAC58                                                     <---------ANAC55(2)                                                    <-------TEIL                                                   --------->CCA1(2)                                                   --------->ARR14(1)                                          ------>NtERF2                                          --------->LBD16                                         <---------DEAR3(1)                                        <-                            <---------TOE1(3)     <---------ARR14(2)                               <-         <------NtERF2      <---------TOE2(3)     --------->ARR14(2)                               <-       <---------DEAR3(1)  <---------DOF5.7(2)    <---------GLK1(2)                              <---    --------->ZAT2         --------->MYB52(1)     --------->ARR11(1)                            <----   --------->GLK1(2)     --------->DOF5.7(2)    ----------->ARR10 ---------->DOF2               <---- ---->LBD16            --------->ANAC58 <---------LBD16         <----------DOF2 <------ZmHOX2a(1)<--- ->MYB52(1)            --------->ANAC58------>ZmHOX2a(1) ---------->DOF2 <-------TEIL          <-----   gagagaagctcggcgagagagtgagacgctaacgtttcttcctccggcgaaagatacgcaaaagggcttaaagggtacagaaggagcatgaagaagagtt  5841600                                                                                 <---------TOE2(3)                                                                                 --------->ANAC58                                                                             --------->CCA1(2)    --------->At4g35610                                                <------NtERF2 --------ANAC46                                                       --------->LBD16 --------ANAC58                                                      <---------ANAC46 --------ANAC58                                                      <---------ANAC58 ---MYB83---------->DOF2                                             <---------ANAC58       *TSS -----MYB46(3)   <---------ANAC46                                 --------->ALFIN1      --------->CCA1(2) -----AtMYB61   <------NtERF2                                <------ZmHOX2a(1) --------->CCA1(2) ---MYB46(1)  <---------DEAR3(1)     <---------------------WRI1 --------->ALFIN1 --------->ANAC58 ---P ----------->GT1      <---------ZAT14          ---------->DOF2 <---------LBD16<------ZmHOX2a(1)   ggtgtgagatgtaaagacggcgttttgagtagaccggccatcgaagagttcggagaaagagaaggagagtggcggagagagataaggaagatagagagag  5841700                                <----------DOF2                               ------>ZmHOX2a(2)                              <---------RVE1(1)                              <------ZmHOX2a(2)                             <---------ARR11(3)                             <---------ARR14(2)                             --------->ARR11(3)                             --------->ARR14(2)                             <---------ARR11(1)                          <---------TOE1(2)                <---------MYB52(1)                      ------>ZmHOX2a(1)                <---------At5g28300                      ================HOX2a_HOX2a     <-----------GT1                              <-                      ===============HOX2a_HOX2a     <-----------GT1           <-----------GT1    <--          <---------ARR14(2)<---------CCA1(2)<---------ANAC58           ---------->ID1           <---          <-----------ARR10<---------DEAR3(2)<---------ANAC46        <---------DAG2         <--------          --------->ARR14(2)<---------ARR14(1) <---------MYB52(1)    <----------DOF2        ---------     --------->MYB52(1) <-----------HVH21    <---------ANAC58     <-----------GT1          ------>ZmHOX2a(2)   agagggcaaacggttctactcttcctcgtcggatcttttgttttgtttcgtttttttaaccgttggatttacttttcgtttttactatgttgatcggacc  5841800                                                <---------ARR11(3)                                                --------->ARR11(3)                                                <---------GLK1(2)                               -----                                              <---------TOE2(3)                       --------->AHL20(2)                  <---------ANAC58        --------->ARR14(2)                      <---------AHL20(2)                  <---------ANAC55(2)     <---------ARR14(2)                   --------->ARR11(3) --------MYB46(3) <---------ANAC46  --------->DEAR3(1)                         <---------AHL20(1)   - -------MYB52(1)  <---------ANAC58  ------->GAMYB                              <---------ARR11(3)  <- ----GAMYB        --------->ANAC55(2)<-----------HVH21                         --------->AHL20(1)  -- -SPL7 ----------->RAV1(1)         --------->DEAR3(2)                   ----------->GT1<---------AHL20(2) -->HVH21 ------->GAMYB            --------->MYB46(3)                   <---------ANAC46        <----   gttgttgttcaacagagattacgtagggagtttttcaaccgtcggatttagattttcttgaaacttctacagttttgtgaatattttatataatacaata  5841900           --------->AHL20(2)                                  ------>ZmHOX2a(1)           <---------AHL20(2)                        --------->MYB52(1)          --------->AHL20(2)                       <---------MYB59          <---------AHL20(2)                       ===================HOX2a_HOX2a ---->AHL20(2)                                     ------>ZmHOX2a(2) -------->RVE1(1)                                <---------ARR11(3) --------ARR11(3)          <---------MYB46(3)    --------->ARR11(3) ------->ARR11(3)  <---------HSFB2a(2)          --------->YAB1<---------ANAC46 -----AHL20(2)     --------->HSFB2a(2)         <---------ATHB12--------->LBD16                      <   aaatctctgtaaattaatactcgagaaggctgttcgatgttctatgccaatgatctaactgattcctggtatgatgtctccaaactctttgtaagttgtc  5842000                                            --------->GLK1(2)                                            ------->TEIL                                            <-----------ARR10                                           <---------GLK1(2)                                         <---------ANAC55(2)                                         --------->ANAC58                       <---------------AGL15                                         --------->ANAC58                       --------------->AGL15                                 --------->ANAC46                          <---------DAG2                                 --------->bZIP60(2)                       <----------DOF2                              <---------ZAT18                          <---------ZAT14        <---------YAB1        --------->ZAT18                          --------->ZAT14   <---------PCF2 ---------ALFIN1   <----------DOF2       --------->ANAC55(2)      --------->WRKY38(1) --------->ALFIN1   ttccactcttatggttcaactctttttccaagtccacttcatcacgaatctcttcatcttctctagcgatgactacacttttcttcaagtgggagcaaat  5842100                                                                               ------>ZmHOX2a(2)                                                                              --------->At4g35610                                                                              <---------At4g35610         <-----------RAV1(1)                                                 <---------AGP1      <---------ARR14(2)                                                     <---------ARR14(2)      --------->ARR14(2)                                                     --------->ARR14(2)     <------ZmHOX2a(1)                                                 <----------DOF2   --------->LBD16                   --------->ATHB12              <----------DOF2  <---------LBD16----------->HVH21 <---------WOX13(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ttatccaggaactgttgttctgacataagaatatttgaatgatttgtagttgtatcaatttcgccttgcctttcttttggatctgaatgtttcaaacatt  5842200  Previous    Next  AGI:  At5g17710.1    Description:  EMB1241 (EMBRYO DEFECTIVE 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization. similar to co-chaperone grpE family protein [Arabidopsis thaliana] (TAIR:AT1G36390.2); similar to co-chaperone grpE family protein [Arabidopsis thaliana] (TAIR:AT1G36390.1); similar to hypothetical protein OsJ_007272 [Oryza sativa (japonica cultivar-group)] (GB:EAZ23789.1); similar to hypothetical protein OsI_007891 [Oryza sativa (indica cultivar-group)] (GB:EAY86658.1); similar to Os02g0612000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047409.1); contains InterPro domain GrpE nucleotide exchange factor, Range:  from: 5839345    to: 5841692    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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