Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ATHB12       <---------ALFIN1    --------->AtMYB61 --------->DEAR3(1)                                                          <---------YAB1 <---------ALFIN1                                                          <-----------GT1        --- --------->AtMYB61        <----------DOF2             <-------TEIL        <---------YAB1       ------ -------->MYB46(3)  ------>ZmHOX2a(1)          --------->AHL20(2)       <---------ICU4      --------- -------ALFIN1   <-----------GT1              --------->AHL20(2)    <-----------GT1         --------- ------>ANAC46  <-----------GT1           --------->AHL20(2)       <-----------GT1          ---------   ccaccacctccactcatttttcctctctctttgattttctctaagtaaataaaaaatacatgtagaattttaacttattactactgtaatagacatgcca  5833500 --------->YAB1 ------->DOF2 ----->RAV1(1)                                                           --------->ICU4 >ANAC58                  <-------TEIL          --------->MYB52(1)    --------->AHL20(2) >ANAC58   <---------At4g35610         <---------TOE2(3)    --------->ZAT6       --------->ANAC46 >ANAC46   --------->At4g35610  --------->LBD16---------->DOF2      ----------->GT1   caaagataacttgagcttaattcaaagtttcatccaggtttaagaaaaacaaagggtcgtcaagactactatgtaaatattaaacaccagtgagtgatca  5833600                                                                      --------->ANAC58                                                                      --------->ANAC58                                                               <---------LBD16               ------>ZmHOX2a(1)                             <---------REM1(2)              --------->TOE2(3)                          --------->ARR11(3)                      ----           --------->ARR14(2)                            <---------ARR11(3)                      <---           <---------ARR14(2)                            --------->ARR14(2)                  --------          <---------GLK1(1)           --------->TOE1(3)  --------->GLK1(2)                   <-------          --------->GLK1(1)           --------->TOE2(3)  <---------ARR14(3)                ------->TEIL          <---------CCA1(2)       ---------->DOF2        <-----------ARR10             ------->TEIL --------->GLK1(2)       --------->TOE2(3)               --------->ARR14(3)           <---------AtLEC2   gagaagctaagtatatcctaaattcagcctaaatccaaaagcttaatttctcttgacaaaatcttcacggataagtcaccctaaatatgcatgtatatgt  5833700                 <---------AHL20(2)                 --------->ATHB12                <---------AHL20(1)                                                                  <      --------->TOE2(3)                                                                            --    <---------AHL20(2)<---------TOE2(3)                                                      ------>MYB46(1) --->TEIL       <---------AHL20(2)                                 ---------->DOF2           ------>MYB83 ----TEIL---------->DOF2       <---------At4g35610         <-------TEIL                     --------- ------->AtSPL8 --------->AHL20(2)         -------->P   <------MYB46(1)         <---------ARR14(2) <- --------AtSPL8 --------->AHL20(1)    <-----------GT1   <------MYB83        <------NtERF2 --------->MYB46(3)   acatattttcttaaagaatttattgatgtatggaggtgattcacttacctgttaagctaggttcaaggggaaagagtcggagaaaccgaagaaccaacaa  5833800                                                                            <-----------GT1                                                                        <----------DOF2 ---------AHL20(2)                    ---------->DOF2                  ------>ZmHOX2a(2)           -- ------->AHL20(2)            <----------ID1                          <---------ARR11(3)        ------ -->RAV1(1)    --------->LBD16   ---------->DOF2                     --------->ARR11(3)     --------- --------AHL20(2)         ---------->DOF2                        --------->CCA1(2)   <----------DOF2   attaaatattagtaacccagaaatattcaaaaggaaaaagaaaagagggcaagagaaaataagtgtgatatgatcttttctctctctctttgagaatgtg  5833900                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                           --------->HSFB2a(2)                                                                                       <------MYB83<-   *TSS                                              ---------->DOF2          ----------->GT1  <----- ------->ETT(2)                                ---------->DOF2       ---------->DOF2   <------MYB46(1) --->ALFIN1                               ------------------------>ANAC81 ---------->DOF2  <---------HSFB2a(2) >GLK1(2)               <-----------TBP  ---------->DOF2        ----------->GT1       --------->MYB59   gtcgacttaaactacaacgcttggctatatatactgactgagagaaagagaaagagaaagagagaagagagaaaagaaaagggttaagtaggtctagacg  5834000  <------------CBF ------->GT1 ----ANAC58 ----O2  <---------WRKY12 ----ANAC58              ----------->GT1 --->O2  <---------WRKY38(1)                                     ---------->DOF2       <---------TOE2(3) --------CCA1(2)      --------->DAG2          ----------->GT1----------->GT1           <---------TOE1(3) ----ANAC46          ---------->DOF2   --------->YAB1      ---------->DOF2<---------MYB52(1)   <-----   tgtatattgggacaacgtaatagaaaagtgtatatatacactcatatgtggaaacattttagaaagtaaaagcgtcgttttgtttgtttaagggaattaa  5834100                                                                                                 ----                                                                                        --------->ATHB51                                                                                        <---------ICU4                                                                                        --------->ATHB12                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(2)                                                           --------->WOX13(1)       --------->AHL20(1)                                                       --------->O2                 <---------AHL20(2)           <---------AHL20(2)                          --------->TGA1a            ------->TEIL   <---       --------->ICU4                                  <---------TGA1a         <---------ANAC55(2)--- <-------MYC3                      --------->AHL20(2)  --------->ANAC58        --------->ANAC55(2)--- <-------MYC2                      <---------AHL20(2)  --------->ANAC46      <-----------GT1 <------- ------->MYC2                     <---------WOX13(1)   <---------O2       --------->ANAC58   <------- ------->MYC3         <---------ZAT6<---------AHL20(2) --------->ANAC58   --------->ANAC58   <------- ------GT1 --------->AHL20(2)  <---------YAB1      <-----------HVH21  <-----------GT1  <---------YAB1   caacgtgcaatttttaaatactaagtgttacttctgattaattttaagtgaagtttcacgtcaattagagattaacaagttacgaatttattattgcgaa  5834200       <----------DOF2       <---------DAG2  <-----------GT1 ----->ICU4 ------ATHB12 ------>ATHB12              ----------->GT1 ------>YAB1       <---------YAB1 --ANAC46       <---------AHL20(2)                                                               ---- --ANAC58   <---------AHL20(2)    <---------AHL20(2)                <-------TEIL      <---------HSFB2a(2) --ANAC58   --------->AHL20(2)    --------->AHL20(2)     <---------------AtSPL8       --------->HSFB2a(2)   tgattaacccttttttaatttatacttggaaagtatataaattgaaacttctattttgtatagtacatgatacatctatactatatttcgagataaatgt  5834300                                              <---------YAB1                                          <---------ANAC46                                          <---------ANAC58                                      <-------GAMYB                                     <---------ANAC58                                     --------->MYB52(2)                                      --------     --------->ARR11(3)              <---------ANAC58                                       ---------     <---------ARR11(3)         <---------ANAC58   <---------ARR11(3)                  --------->AtLEC2    --------->YAB1    <---------TOE2(3)<---------MYB52(1)--------->YAB1    ------->TEIL--------->ANAC58   <---------YAB1<----------DOF2<---------ANAC58 ------->TEIL      --------->YAB1      --------->ANAC58 --->TEIL --------->YAB1--------->AHL20(2)<---------ANAC58        --------->ICU4  --------->YAB1   atgttatgatattgatcatcttttaatgaattatgcgtttcgttgcttatgaatatcactcatatgcaaaaatgatgtatgtaaacatcatgcaaaaatg  5834400  Previous    Next  AGI:  At5g17700.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT3G03620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45424.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 5830583    to: 5833903    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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