Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->At4g35610                                                                                 <-----------HVH21                                      <----------DOF2                           <---------ICU4                       --------->REM1(1)   ------>ZmHOX2a(1)------>ZmHOX2a(1)  ------>ZmHOX2a(1)                <-----------GT1    ---------->ID1    <---------DAG2      <---------At4g35610---------         --------->AHL20(2)    <----------DOF2    <---------ALFIN1------>ZmHOX2a(1)<---------ALFIN1   aatagcttcaatttcataaaacccttcatcaagctttggcctttcctcttgcccaccttctccttctccttcttcatcttcctcatcacctccatcatct  5829300                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                 <---                                                                                              <------                                                                                             ------>MYB83                                                                                             ------>MYB46(1)                                                                                           --------->AtMYB61                                                                                           <---------MYB111(2)                                                                                           <---------ALFIN1                  <<<<<<<<<TBF1       --------->SPL7                                       <---------MYB111(1)               <<<<<<<<<TBF1         <---------MYB52(1)    --------->HSFB2a(2)             --------->DEAR3(1)         ------>ZmHOX2a(1)          --------->LBD16        <---------HSFB2a(2)            --------->ANAC46    --------->TOE2(1)               <---------SPL7    ------>MYB46(1)                   <---------ALFIN1    --------->TOE1(1)            ------>ZmHOX2a(1)    ------>MYB83          <---------ALFIN1---------   ------>ZmHOX2a(1)    <---------At4g35610   --------->YAB1      --------->GLK1(2)  --------->AtMYB61 >YAB1---------->ID1    --------->At4g35610  <---------ATHB12  ----------->ARR10  <---------ALFIN1<--   tcatcctcgtcctcttcttcttcttcatctccatcctccgtaggcctatcatcaccaatctcgcgaagaatcgactctccacttccacctccacctcccc  5829400                                                                           --------->ANAC46                                                                          --------->LBD16       <-----------HVH21                                                  ------>NtERF2       <-----------TGA1                                                  --------->ANAC46      --------->O2                                                       --------->DEAR3(1)      --------->bZIP60(1)                                               <---------LBD16      <---------bZIP60(1)                                              <---------ATERF1(1)     <------NtERF2                                                    --------->ARR14(2)    <-----------HVH21                                                 <---------ARR14(2)    <---------ATERF1(1)                                              --------->ATERF1(1)    ------>NtERF2                                                   <-----------HVH21   --------->RAP2.3(2)                                              <---------ATERF1(1)   --------->DEAR3(1)                                               ------>NtERF2   --------->RAP2.3(3)                                             --------->RAP2.3(3)   --------->RRTF1(3)                                              --------->RAP2.3(2)  --------->ATERF1(1)                                              --------->DEAR3(1)  --------->RAP2.3(1)                                             --------->DEAR4(2) <---------ATERF1(1)                                              --------->RAP2.3(1) ------>NtERF2                                                   ------>NtERF2 --------->LBD16                                                --------->DREB2C(2)             ----- -------->DEAR3(1)      --------->DEAR3(1)          ------>NtERF2--------->ABI4(1)              ----- -------->ANAC46      ------>MYB46(1)        <----------DOF2    <---------ALFIN1              <------ ------->SPL7         ------>MYB83        --------->LBD16       --------->DEAR3(1)    <-------TEIL ------ALFIN1        <---------ALFIN1     ------>NtERF2         ------->GAMYB       <---------GLK1(2) ---ALFIN1           --------->MYB55(1)  <---------RAP2.6(2)   --------->DEAR3(2)  <---------ZAT2 >ABI4(1)           <---------MYB55(2)  <---------LBD16        --------->MYB46(3)  --------->At4g35610 -------ATERF1(1)   --------->MYB46(3)<-----------GT1        <---------ALFIN1      --------->ZAT2   ctccgccgtcgtcactgccaaacccaccgtctccactaattttccggctttctccgactgtttccaccgccgtctccgcctcaccagcttcgttcaacac  5829500                                                                          ----------->GT1                                                                        --------->ALFIN1                                                              --------->TOE1(3)                          ---------->ID1             --------->DEAR3(1)<------ZmHOX2a(1)   --------->GLK1(1)<---------ALFIN1         <---------ARR14(2)      --------->ALFIN1       <-------- ---->ZAT2        ----------->RAV1(1)   --------->LBD16      ----------->RAV1(2)   <---------TOE2(3) ------>RAV1(2) --------->At4g35610     ------>ZmHOX2a(1)  <---------ALFIN1--------->At5g28300   <--- ---ALFIN1     ------->GAMYB  <----------DOF2--------->ARR14(2)     <------ZmHOX2a(1)       <--------   ctggggtttcttcttaacagcaccacttgcccctttcatttcctgagtattcgagcctcccaaacctgaaggaggagggtgaatcaaggtaatcgcgttc  5829600                          <---------TOE2(3)                 <---------HSFB2a(2)                                <-----------GT1 -ANAC58         --------->HSFB2a(2)                           <---------DAG2       *TSS      <------ ---------------------ANAC81          <------ZmHOX2a(1)        <----------DOF2 <---------TOE2(3) -ANAC58     <----------DOF2 --------->ARR11(3)       --------->ATHB12         <---------TOE1(3) <---   tcttctcttcttctcctttttagaaatcaaggattttggaggaagaagatgaagaaagattgaaactttttctctatttctgaggtttttgtttttgcag  5829700                   ---------->DOF2            ----------->HVH21           <---------MYB59          ====================bZIP_DOF          ----------->RAV1(2)          <---------TGA1a                    --------->ARR14(2)          <---------At4g35610                <---------GLK1(2)                      ---------->DOF2       ----------->HVH21                     <---------ARR14(2)                   <------ZmHOX2a(1)      <---------MYB59                       <------------------------ANAC81      <----------ID1     ----------->RAV1(2)             <---------DAG2                         <---------YAB1    --------->ARR11(3)               <----------DOF2                       ------------>CBF    <---------ARR11(3)          <-----------GT1                           --------->YAB1 ---AtLEC2--------->At4g35610 <------------------------ANAC81      --------->AHL20(2) ---ZmHOX2a(1)  --------->TOE2(3) <-----------GT1  <----------DOF2 <---------AHL20(2)--------->DAG2   gaagaagacctgacctgacctcaaagaccagttttttcacttttttggattctcttttttttttttttttttaatatcacaataggaaaagttgaataca  5829800                                                                                                    -             --------->YAB1                                   <---------AHL20(2)                <----          --------->TOE2(3)                                   <---------ICU4                   <-----        <---------TOE1(3)                                    --------->AHL20(2)                ------        <---------TOE2(3)                                  --------->YAB1               ----------->GT1    --------->TOE2(3)                               <---------YAB1                     <---------TOE2(3) <---------GLK1(2)      --------->YAB1  <---------YAB1   --------->AHL20(2)            <---------TOE1(3)   gcaaattcttaacgtttataatctaattagaagagattatttctaattactaatatgaaaataataaatactactgaagaaaatatgtgaaggtaaatta  5829900        --------->AHL20(1)        --------->AHL20(2)        <---------AHL20(2)        --------->ARR11(3)        <---------ARR11(3)                                                     <---------GLK1(1)        <---------AHL20(1)                                                     --------->GLK1(1) <---       --------->AHL20(2)                   --------->AHL20(2)             --------->ANAC58     <---- ---------->GT1                  --------->AHL20(2)                        --------->ANAC46   <------ -----AHL20(2)                  <---------AHL20(2)                  <----------DOF2          <------- ----AHL20(2)                   --------->AHL20(2)       <---------ZAT18   --------->ANAC58  -------- --->AHL20(2)                 <----------DOF2---------->DOF2        <---------------AGL15<------ZmHOX2a(1)   aatcgaaaaatatattaaactgaaaacattttctttaaattagaaataaaagaacatcgtgctcttgctccttttacaaggaaatcaactaggacattat  5830000                                                                 --------->ANAC58                                                                 --------->ANAC58       ---------->DOF2                                                           --------->GLK1(2)          --------->ZAT14                                                          <---------GLK1(2)           <---------ZAT14 --------GT1                                              --------->ARR14(2)      <------------------ -----YAB1                                                <---------ARR14(2)     <---------ZAT14 ---ICU4                 ----------->GT1                  --------->ARR11(3)     --------->ZAT18 --YAB1         ---------->DOF2                         ----------->ARR10        --------->ZAT14 ->ICU4   --------->AHL20(2)     --------->YAB1         <---------TOE2(3)        <---------ZAT18   tacaacttaaaaaaaaatcaaaggagattgaaaaatcagaaaataagtctcataaactaagattctcactccaagtctccaagtgcactgcaaaggcaga  5830100                               <---------AHL20(1)                          <---------YAB1                         --------->TOE2(3)                        <---------ICU4                        --------->YAB1                     --------->YAB1               ------>ZmHOX2a(1)            <-----------ARR10           ------>ZmHOX2a(2)   <--------ATHB1          <---------GLK1(1)    --------->AHL20(2)            ------->GAMYB          --------->GLK1(1)    <---------ICU4              ------>MYB83         --------->ARR11(3)    --------->ATHB51           ----------->RAV1(1)         <---------AGP1<---------YAB1       --------->ARR11(3)      ---------->DOF2         <---------ARR14(2)    --------->YAB1             --------->MYB52(1)         <---------ARR11(3)   <---------ATHB12           --------->AtMYB61    --------->HSFB2a(2)         --------->ARR14(2)   <---------ATHB51          --------->MYB46(3)    <---------HSFB2a(2)        <---------CCA1(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)------>MYB46(1) ------>ZmHOX2a(1)        - -----TaNAC69(2)  --------->YAB1            <---------ARR11(3)  ---------->DOF2     <---------ARR11(3)   caacttagttggatctcctaacatcatcatcaataattttcagcaatatctcatccaaaccaacagaaaagaaagtccttctccaagataaacttcatcg  5830200  Previous    Next  AGI:  At5g17690.1    Description:  TFL2 (TERMINAL FLOWER 2). Identical to Chromo domain-containing protein LHP1 (LHP1) [Arabidopsis Thaliana] (GB:Q946J8;GB:Q9FN82); similar to terminal flower 2 protein [Malus x domestica] (GB:BAF75819.1); contains InterPro domain Chromo domain-like; (InterPro:IPR016197); contains InterPro domain Chromo shadow; (InterPro:IPR008251); contains InterPro domain Chromo domain; (InterPro:IPR000953) Range:  from: 5827173    to: 5829684    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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