Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                         <-----------RAV1(2)                                                  <------                     <------MYB83                                                      <---------ALFIN1                     <------MYB46(1)                                                --------->AtMYB61                   <--------P                                                       --------->DEAR3(1)                   <---------MYB52(1)                                               <---------ALFIN1      <-----------GT1<---------MYB46(3)                                          <-----------GT1 --------DEAR3(1)<-----------RAV1(1)                    --------->MYB52(1)    --------->ARR14(2) ------>HVH21    ====================RAV              ----------->HVH21 <------ZmHOX2a(1)     <------ -At4g35610    ----------->RAV1(2)       <---------ARR11(3)         ---------->DOF2--------->MYB46(3) >At4g35610    <---------At4g35610       --------->ARR11(3) <---------MYB52(1)<---------ARR14(2)   gacggtgtttaccattcacctgttggttcagacgatgaaaccagaccttggtatggctcaccggttattgtaaaggactggattcaccacctccttgagt  5822600      --------->ZAT14      <---------ZAT14                                                   <---------AHL20(2)  <-----------GT1                        --------->ANAC46               --------->AHL20(2)  <-------- ----WOX13(1)                            --------->ANAC58            ------->TEIL    <---------YAB1 ---ANAC58                <-----------GT1--------->ANAC58    --------->ANAC55(2)   --------->ZAT6 ---ANAC58  <---------GLK1(2)<---------CCA1(2)               <---------ANAC55(2)<----------DOF2  ----   gattttacaacactgattcgtttcattgtttctatcttttgactcgcaattcaaactctaatcacataatgtatttatatttctttcactattgaatgat  5822700                                                                                            <--------                                                         --------->GLK1(2)            --------->DAG2       --------->YAB1                             <---------LBD16                    ================ -WOX13(1)                          ---------->DOF2<---------ANAC46            ----------->GT1 -->ZmHOX2a(2)              --------->CCA1(2)   <---------GLK1(1)   <------------CBF ---------->DOF2   ccaattctatcaaaatgccatcaagaagagatttgagtaaaagctgctagatttcggagaatcactgctaaattgcaaacaaggtcaaaaagttttgatt  5822800                          ---------->DOF2                     <------------CBF                    --------->ATHB12                  <-----------HVH21                  <-----------TGA1                 --------->ANAC46               <---------O2               --------->O2--------->DAG2                                                         <--               <---------TGA1a                                                                 <-----               --------->TGA1a                                                               --------               <---------ANAC55(2)                                                --------->CCA1(2)               --------->ANAC55(2)                                                --------->GLK1(2)               ======================bZIP_DOF                                    <---------ARR14(2)               --------->ANAC58                                                  --------->ARR14(2)               --------->ANAC58                      <---------YAB1              --------->ARR11(3)            ----------->HVH21                  --------->HSFB2a(2)    <---------TOE2(2)     ---------    ----------------------->TaNAC69(2)  --------->WRKY12              <---------TOE1(2)     <-------- -YAB1     <-----------HVH21        --------->HSFB2a(1)               <---------TOE2(3)   --------->YAB1 ========================bZIP_DOF   <---------HSFB2a(1)     <---------AtLEC2     <---------ARR11(3)   ttgactctgtctctgtcacgcgtcattgaaaagttggaacctttgacttctgggtatcattttcatggttccaaggttttggagatactggatgatgatg  5822900                                          --------->ETT(2)  <---------GLK1(1)                       <---------ETT(2) -------WOX13(1)     ----------->GT1 <------------CBF                                        -------- ----YAB1    --------->At4g35610  --------->ANAC58      <------------CBF                     -------- ->YAB1      <---------At4g35610  --------->ANAC58   ------------>CBF             --------->At4g35610 >ICU4  <---------ANAC58      <------ZmHOX2a(1)--------->DOF5.7(2)                <---------At4g35610 -YAB1  <---------ANAC58     <----------ID1   <----------DOF2         <-----------RAV1(1) -----------   atagatacctgcttgagctaaaatagtaagaaggacaagaattgtcgactttaactgcaattgatggaatctatgtggtagtagagctcagagacaatcc  5823000                                                                                    <---------ANAC58                                                                                    <---------ANAC58                           <<<<<<<<<TBF1                     <---------MYB52(1)    <-------TEIL<----- <---------ANAC58       <<<<<<<<<TBF1                      <---------ANAC58     --------->CCA1(2) <---------ANAC58    <<<<<<<<<TBF1                         <---------ANAC46    --------->ARR11(3) ->ANAC58         <<<<<<<<<TBF1         --------->ALFIN1   <---------ANAC58    <---------ARR11(3) ->ANAC58      <<<<<<<<<TBF1  <<<<<<<<<TBF1         ------->TEIL             ----------->ARR10 <----- ->CBF    <------------------------ANAC81      --------->MYB52(1)        <------ZmHOX2a(1)    <------   atggcttctcttccttcttcttcttcttcttcttcttcaacagtgtggaaaacggacgttttcgtgagttttagaggagaagatgtgcgtaaaacattcg  5823100                                                                    ----------->GT1                                                                   ----------->GT1                                                           ------>ZmHOX2a(2)                                                         --------->ARR14(2)                                                         <---------AGP1  --------->GLK1(2)                                                         <---------ARR11(3)                                                         <---------ARR14(2)         <----------CDC5                                         <-----------HVH21 =================HOX2a_HOX2a ----ANAC58                        ---------->DOF2 <---------ARR14(2)   --------->GLK1(1)         <-- ----ANAC58                --------->ALFIN1        --------->ARR14(2)<------ZmHOX2a(1)  <---------At4g35610 -TEIL                 ------>ZmHOX2a(2)<----------DOF2  --------->ARR11(3)        ----------->RAV1(2)   tgagccatctattctgcgagtttgatcggatggggattaaagctttcagagacgatttggatctacagagaggaaaatccatctcccctgagcttataga  5823200                                                        --------->ZAT2                                                 --------->ZAT2                                                 --------->At4g35610                                                 <---------ZAT2                             <---------AtMYB61   <---------At4g35610                             ----                --------->GLK1(1)               ------->TEIL                                     ----               <---------ARR14(2)            --------->ANAC58                      <------ZmHOX2a(2)               --------->ARR14(2)            --------->ANAC58            <---------ARR11(3)     -----               <---------GLK1(2)        <-----------ARR10 --------->ALFIN1        --------->ARR11(3)  <------ZmHOX2a(2)     <-----------RAV1(1)  --------->ANAC46 <---------MYB46(3)  <---------ARR11(3) ---------------------TaNAC69(2)       <------ZmHOX2a(1)<---------ZAT2   --------->ARR11(3)----------   tgcgatcaaaggctccagatttgccattgttgtggtctctaggaactacgcagcttcaagctggtgcttagacgagctcttgaagatcatggaatgtaat  5823300      >>>>>>>>>ARR1    <---------YAB1   <-------TEIL                                                          --------->ARR11(3)  --------->ARR14(1)                                          <---------ARR14(2)  --------->CCA1(2)                                          <---------HSFB2a(1) --------->ARR11(1)                 <---------LBD16          --------->HSFB2a(1) <---------ARR14(2)                ------>ZmHOX2a(1)         <---------HSFC1(2) --------->ARR14(2)              ================================HOX2a_HOX2a ----->YAB1                      ------>ZmHOX2a(2)           --------->HSFC1(2)                     - ------>DOF2                 <-------TEIL                 <------ZmHOX2a(1)              ----------->HVH21 ---->ICU4 ------->TEIL     <--------P        --------->At4g35610        <---------ARR11(3)        -- ->GT1>>>>>>>>>ARR2    <---------TOE1(1)      <---------At4g35610<---------ANAC46    <---------At5g28300   aaagatacgattgtacccattttctacgaggttgatccttcggatgtgagaagacagagaggaagtttcggtgaagatgttgagagtcacagtgacaagg  5823400                                                          --------->HSFB2a(2)                                                          <---------HSFB2a(2)                                                          <-----------------AG                                                          <---------LBD16                                                          <-----------------AGL1                                                       --------->GLK1(2)                                                      <---------ARR14(2)                                                      <---------GLK1(2)                                           --------->ARR14(2)                                           <---------ARR14(2)                                        ====================================MADS_MADS                                        --------------->AGL15                                        <---------------AGL15                                <-------                                   --------->At4g35610<---------ARR11(3)                   <------MYB46(1)                      <----------DOF2  ----------------->AGL1                              <------MYB83        <---------ARR14(2)         <---------At4g35610--------->ARR14(2)               --------->MYB52(2)   --------->ALFIN1 <---------HSFC1(2) <-----------------AGL2       <--------P       --------->ZAT14 -------->DAG2      --------->HSFC1(2)------>NtERF2   --------->ARR11(3)    <---------HSFB2a(2) <---- -------->DOF2---------->DOF2      --------->ZAT2   ----------->ARR10       --------->HSFB2a(2) -----   agaaagtggggaaatggaaagaagctttgaagaaattagctgccatttctggtgaagattctcggaattggtaagtttctaaaacagtttagttggtgta  5823500  Previous    Next  AGI:  At5g17670.1    Description:  hydrolase, acting on ester bonds. similar to unnamed protein product [Vitis vinifera] (GB:CAO17877.1); contains InterPro domain PGAP1-like; (InterPro:IPR012908) Range:  from: 5821062    to: 5822738    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g17680.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G11250.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64653.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76615.1); contains InterPro domain Disease resistance protein; (I Range:  from: 5823001    to: 5827155    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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