Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ZAT6                              --------->DAG2           --------->ANAC58               --------->ZAT18                   ---------->DOF2           --------->ANAC58          ---------->DOF2                     --------->ANAC58         ---------->DOF2       --------->DAG2                            --------->ANAC58----------->GT1 --------->YAB1               ---------->DOF2                          ---------->DOF2---------->DOF2   ctatgaagatgaaaagctatctacttggaacaaaaagagaaaagaacactaatcgaaacaaaaacaatacccagaaagcaaagactggaaaaggaaacaa  5820500                                                              <---------TOE2(3)                                                              <---------TOE1(3)                                                  --------->ARR11(3)                                                  <---------ARR11(3)                                                 <---------RVE1(1)                                                 <---------CCA1(1)                                                 --------->GLK1(1)                                                 --------->RVE1(1)                                                 <---------GLK1(1)       --------->ANAC58                         <---------ARR11(3)       --------->ANAC58                <---------ARR14(2)  <---------WOX13(1)     <--------P                        --------->ARR14(2)--------->ATHB12  <---------TOE1(3)                   <------ZmHOX2a(1) <---------YAB1                          -----  <---------TOE2(3)            ---------->DOF2  --------->ARR11(3)    --------->ARR14(2)   --------->AtMYB61   atttagggtaagcaaaaacagagggagagagaagaaaggaggatacttcagatatcttatgattgaggttaagttctgcatactccaattccaccaattc  5820600             ------>ZmHOX2a(1)            --------->TOE1(3)           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         --------->ARR11(3)         <---------GLK1(2)         --------->AGP1         <---------ARR11(3)                                       <---------AHL20(2)         <---------ARR14(2)                              --------->MYB52(1)         --------->ARR14(2)                ------>NtERF2<---------ARR14(2)        <---------At4g35610               ----------->TGA1       --------->AHL20(2)        <---------ANAC46 <---------ANAC58                         ----------->HVH21--------->ANAC58                <---------ANAC58 <---------ANAC58                       --------->At4g35610--------->ANAC58     ----------->GT1 ---->ATHB12--------->TOE2(3)   <---------TOE2(3)       --------->ARR14(2) ---------->DOF2 <---------ANAC58   attgcttctcagatccttaaaatcgacacaaactgaggtagacgctgacgaagacgcagaaacggcattaaatgctctaaagctgttacaatggcgaggg  5820700                                                                        --------->At4g35610                                                 <---------DAG2         <---------At4g35610                           <---------At4g35610   <----------DOF2    <---------REM1(1)                     --------->MYB52(1)<------ZmHOX2a(1)   <------ZmHOX2a(1)                   --------->CCA1(2) <---------TOE2(3)  <-----------RAV1(2)              --------->ANAC58         <---------------AGL15  <---------YAB1  <---------DAG2      --------->ALFIN1     --------->ANAC58   attttgtgttccctcatgaagataaacggagatgatgctaaggagaacacccttttcgccaggagcaatggtgtagctgaagacgaagagcaagcttgac  5820800                                               <---------HSFB2a(2)                                 --------->ARR14(2)                <----------DOF2                  <                                 <---------ARR14(2)     <---------AHL20(2)          ------>ZmHOX2a(1)         --------->ICU4         <------ZmHOX2a(1)       --------->AHL20(2)        ----------->RAV1(2)    --------->ANAC58            --------->ATHB12       --------->YAB1     <---------ZAT18       -----    --------->ANAC58         <------ZmHOX2a(1) --------->HSFB2a(2)*TSS   <---------ZAT6        ------   atagagaagccatttttgttagagaaacagaggaggattggattcaattccagaccataaaaatgttttcttttagtgttcttctcctgcttcttaaacc  5820900                        ------------>CBF                                             --------->ALFIN1                       ------>ZmHOX2a(2)                                           <---------ANAC58               <---------ZAT2 --------->HSFB2a(2)                                  <---------ANAC46               <---------At4g35610                                                 <---------ANAC58         >>>>>>>>>TBF1--------->At4g35610                                    <---------AHL20(2)   <---------TOE2(3) --------->ARR11(3)                                     --------->AHL20(2) ---------ATHB12     <---------ARR11(3)                                     <---------AHL20(2)      - ------->CBF   --------->At4g35610      <-------TEIL                   ----------->GT1            <-- --->ANAC46 ---------->DOF2   <---------HSFB2a(2)                    --------->GLK1(2)     ----------   caatgaaggaagaagaaagctgtgatctcaatctagaaaacgttcaagagttttgtacttaatgtgataagaatcgaaataaatggggtgtttgtgtaaa  5821000                                                                                               <-----                                                                        --------->MYB46(3)     ======                                                            <---------ICU4                    <------                                                      --------->At4g35610                 <---------DEAR3(1)   --------->AHL20(2)                             <----------DOF2      -------->P        <------NtERF2   <---------AHL20(2)                         <---------LBD16 *TSS  <---------MYB52(2) <---------DEAR3(1) -------->TOE2(3)         ----------->GT1<----------DOF2    --------->YAB1            --------->ATERF1(1) -----TEIL     --------->ARR11(3)      --------->ZAT2 <---------At4g35610             <------NtERF2 ->GT1         <---------ARR11(3)      <---------At4g35610 <---------YAB1   ---------->DOF2   -------   tacattaaaatgcttaagaacttgtggattttaaaaactccagctttctccgcttgagctcatcatagccactaaccaaaaagatggcctcggcgatggt  5821100                                                                                      <---------MYB52(1)                                      <-----------bZIP910(2)                         --------->LBD16                                     --------->TGA2(2)                               --------->At5g28300                                    <-----------TGA1                                --------->RRTF1(2)                                    <-----------HVH21                               --------->RAP2.6(2)                                   --------->ANAC55(1)                              --------->RRTF1(3)                                   --------->ANAC58                                --------->RAP2.3(1)                                   --------->ANAC46                                <------NtERF2                                   --------->ANAC55(2)                            --------->LBD16                                   <---------bZIP60(1)                            ------>NtERF2                                   --------->bZIP60(2)                           --------->ANAC46                                   --------->O2                                 <---------MYB55(2)                                   --------->ANAC58                           ------>MYB83                                   <---------O2                               ------>MYB46(1)                                   --------->TGA1a                            --------->ARR14(2)                                   --------->bZIP60(1)                        <---------ARR14(2)                                   <---------TGA1a                            -------->P                                   <---------ANAC55(2)                      <---------MYB111(1)                                   <<<<<<<<<<HY5                            --------->DEAR3(1)                                  <-----------STF1                     --------->ANAC58                                 <---------ALFIN1                     <---------------AtSPL3                               ------>NtERF2                    --------->GLK1(1)--------->ANAC58                              --------->RAP2.3(3)              --------->ARR14(2)--------->ANAC58                              --------->DEAR3(1)              <------NtERF2 --------->MYB46(3)   ----                             --------->ERF1                 --------->RAP2.6(2) --------->DEAR3(2)                            --------->LBD16   ------>ZmHOX2a(1)<---------ARR14(2)--------->DEAR3(1)                            <---------At4g35610             --------->LBD16 <---------MYB59     -----                      ----------------------->TaNAC69(2)    --------->RAP2.3(2) --------->MYB46(3)      <-----------RAV1(2)  --------->ANAC46  <---------ALFIN1--------->LBD16<---------MYB46(2)  ----- --GAMYB  <----------CDC5 <---------LBD16 <---------ALFIN1 <---------LBD16 --------->DEAR3(2)  ------ ============================================MYC_MYB      --------->LBD16 --------->MYB52(1)  <------ ---MYB46(3)   ------>NtERF2--------->At4g35610  ------>ZmHOX2a(1) <-----------HVH21--------->RAP2.3(2) ---->GT1 ===================================MYC_MYB      ------>NtERF2--------->ANAC58      <-------   tacatcgctcaggctgaggccaaacttctccgcagccacgtcaccctcctcctcttcttccgccggaaatgtcaagtaccgacccgccgtaattctcccg  5821200                                                                         <-----------GT1  <---------AHL20(2)                                                <---------AHL20(2) ----->At5g28300                              <---------MYB46(3)  <---------YAB1 ------>GT1        <---------WOX13(1)      --------->ALFIN1    <---------YAB1 ---->LBD16      --------->ATHB12   <------NtERF2              <---------AHL20(2) --->LBD16      <---------YAB1     --------->LBD16        <---------AHL20(2)               <---------YAB1 ---LBD16     <----------DOF2     <---------ANAC46       <---------AHL20(2)               <---------ANAC46 --LBD16      ------>ZmHOX2a(1)  <---------LBD16         --------->AHL20(2)       <-----------GT1   gtaaataatctccgtcctttgattgagacaactatggcggaaaatgtgtggttccaaaatttttttttattattttcactgaattttctgtttcttatag  5821300                                                                               <------MYB46(1)                                                                               <------MYB83                                                                              <---------MYB46(3)                      <----------DOF2---------->DOF2              <---------YAB1      <---------ZAT6            ------>ZmHOX2a(1)       <---------AHL20(2)     <---------ZAT6    <---------ANAC46    <---   ttttaagtgttttcctgcattttcctttagaaacatatttaaagtccaaaacttggtttttgtgttatatgattcaatggtgggtttagtgtcactatgg  5821400  Previous    Next  AGI:  At5g17660.1    Description:  methyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO17868.1); contains InterPro domain Conserved hypothetical protein CHP00091; (InterPro:IPR004395); contains InterPro domain Putative methyltransferase (InterPro:IPR003358) Range:  from: 5818550    to: 5820866    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g17670.1    Description:  hydrolase, acting on ester bonds. similar to unnamed protein product [Vitis vinifera] (GB:CAO17877.1); contains InterPro domain PGAP1-like; (InterPro:IPR012908) Range:  from: 5821062    to: 5822738    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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