Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ANAC58         --------->ANAC58 ----------->GT1 ->ZmHOX2a(1)                    <---------YAB1 ---------->AG              <------MYB46(1)    --------->GLK1(1) ---------->AGL1            <------MYB83      --------->ARR14(2)             <------MYB46(1)       <- -ARR14(2)                 --------->MYB59    <---------ARR14(2)             <------MYB83----------->GT1 >ARR14(2)     <<<<<<<<<<<<<<<<<LFY <---------TOE2(3)                       --------->MYB59        --   aaactgtaaacaagaaaacacattggcattaggttatgaaggaaaacagataccttgttgcatcaaacacattggcattaggttaagagaagggcaaaaa  5817900                                                                                 <---------AHL20(2)                                               <---------ANAC58                  --------->AHL20(2)                                               <---------ANAC58               --------->TOE2(3)                                            --------->ARR11(3)              ------>MYB83                                            <---------ARR11(3)              ------>MYB46(1)                                            --------->ARR14(2)             ----------->RAV1(1)                                            <---------ARR14(2)         >>>>>>>>>>WRKY26       <----------DOF2                    ----------->ARR10            <---------WRKY18(1) --------At4g35610                    --------->ANAC46  <---------ZAT14>>>>>>>>>>WRKY43 ------->At4g35610                <-----------HVH21   <---------YAB1   >>>>>>>>>>WRKY38   cagctgtttctttttctctacagatggagacatatcgttcacagaagatacttgtgactatagttaagaaacttgaccaacattaaaatccattttcaca  5818000                                 <---------YAB1                                --------->TOE2(3)                               <--------HAHB4                               -------->ATHB1                               --------->ATHB12                               --------->YAB1                              --------->ICU4                         --------->YAB1                   --------->MYB52(1)                 <---------MYB111(1)                             <---------TOE2(3)                 <---------MYB52(2)                         <---------ZAT6                         <-            --------->HSFB2a(2)<---------ICU4      --------->ATHB12                                --         ------>ZmHOX2a(1)   --------->GLK1(2)    <---------YAB1 <---------TOE1(3)                 <-  ---------->DOF2<---------MYB46(2)--------->AHL20(2)      <---------TOE1(3)                  -------   catacaaagtccttctctaactaacaagaagaatcattaaaacattctaggtatgatttctagggttagggtttcaaaatccctgctctaacagaacaaa  5818100                          --------->GLK1(2)                         <---------ARR14(2)                         --------->ARR14(2)        ----------->GT1  <---------GLK1(2)       <---------TOE2(3) <---------ARR11(3)    --------->AHL20(2)   --------->ARR11(3)                        --------->TOE1(2)    <---------AHL20(2) ----------->ARR10                     --------->ANAC46 ------TEIL          ---------->DOF2                       --------->ANAC58 ------->ZAT18     ------->GAMYB<---------CCA1(2)          --------->ANAC58 --------ZAT18  --------->MYB52(1)                         --------->ANAC46       --------->ANAC46 --->DOF2       ----------->RAV1(1)                       ------->GAMYB     --------->AHL20(2)-------   gtgcattttaatgtaaaacaacagaaagattctcatatcacaagattgaatgctattcaacacacaaaacctagaaaaaaaaatacgactctaaacaaaa  5818200           --------->ZAT18           <---------ZAT18          <---------ANAC58          <---------ANAC58                             --------->LBD16      --------->CCA1(2)                               --------->ANAC46     <---------ARR11(3)                              <---------LBD16     --------->ARR11(3)           <------------------------ANAC81  <---------TOE2(3)--------->ANAC58        <----------DOF2 ---------->DOF2   --------->ANAC58    <----------DOF2--------->LBD16         <----------DOF2 --->DOF2--------------->AtSPL8  <---------YAB1<---------YAB1         ----------->HVH21       -------   gattaaagatttgtgtaccacaagcttaagggtttttgattctttctttctgattcccgctaattcgactctgcgacggtctttaacaacgagaactgat  5818300                                                                                                  ---                                                                                              -------                                                                                            ---------                                                                                            ---------                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                          --------->ZAT6  ---------->DOF2                               <------ZmHOX2a(1)                        <---------DOF5.7(2)        --------->At4g35610               --------->At4g35610   <---------------------WRI1    ---------->DOF2 *TSS                             <---------At4g35610 -->ATHB12        --------->ALFIN1    <----------ID1       <-----------TBP        --------->At4g35610   ttgatttcgaaattctcagagtgggataacgctaagaaagatgacaaagagtcgtctgaacatatatagttctgccttcgtcgaagcagaggaaacgcct  5818400                                                                      <---------ICU4                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                                     --------->ICU4                                                                  <---------ZAT6                                                                ----------->GT1--------->ARR14(2)                                         <----------DOF2    --------->ARR11(3) <---------ARR11(3)                           --------->ANAC58                 <---------AHL20(1) --------->ARR11(3)     <---------At4g35610   --------->ANAC46                 --------->AHL20(1) <-----------ARR10 -------->HVH21            --------->ANAC58            --------->ARR11(3) <---------At5g28300 ---->RAV1(2)       --------->HSFC1(2)  <---------ANAC58    <---------AHL20(2) <---------ARR14(2) >ANAC58         --------->LBD16        <---------ANAC58 --------->AHL20(2)   <---------ARR14(1) >ANAC58        <---------ANAC46<---------ANAC46       <---------ARR11(3)<-----------GT1   gagacgctgctaatcgagccgtagtttccacgctacgcgtttgcttttattcttcaagataatatatagtattaattacagtatcttcagaaatgaaaac  5818500                                                                            ------>ZmHOX2a(2)                                                    ----------->GT1        <------ZmHOX2a(2)                                                <---------ARR11(3)        <---------AGP1                                                --------->ARR11(3)        <---------ARR11(3)                                             >>>>>>>ZML2   ----------->GT1--------->ARR14(2)        <                                             --------------->AGL15        --------->ARR11(3)        <                                             --------->HSFC1(1)           <---------ARR14(2)       --                                             <---------HSFB2a(2)          --------->GLK1(2)        --                         ----------->GT1     <---------------AGL15       <------ZmHOX2a(1)  <--------                       ---------->DOF2       --------->HSFB2a(2)   <---------YAB1           ---------                      <------ZmHOX2a(1)   --------->ARR11(3)     <-----------GT1           --------->AHL20(2)   atatgtcttctattgtttatatgaggaaagaaaaattcgaataagttctagatattgaaaaatgttattacgataggatctgattccagtcaaattaata  5818600                                           <----------DOF2                                          <---------ANAC46                                       ----------->HVH21                                      <-------MYC3                                      ------->MYC3                                     <---------bZIP60(1)                                     --------->bZIP60(1)                                     =====================================bZIP_DOF                                     <---------ANAC58                                     --------->TGA1a                                     --------->ANAC58                                     <---------TGA1a                                     --------->ANAC55(2)                                     <---------ANAC55(2)                                            <                                     --------->ANAC46                                               <                                     <---------ANAC46                                              --                                     <---------bZIP60(2)                                         <---                                     =======================================bZIP_DOF         --------                                     <---------O2                                          <---------SPL7                                     --------->bZIP60(2)                                  <---------DEAR3(2)                                     <---------ANAC58                                     <------MYB83  ------>MYB46(1)                    --------->ANAC58                                     <------MYB46(1)  ------>MYB83                       --------->O2                                        <---------MYB46(3) ---------MYB59               =================bZIP_DOF          ---------->DOF2         --------->MYB46(2) ---------MYB111(1)           ---------->DOF2   --------->ANAC55(2)  ----------->GT1     <----------- ------->ANAC46      <-----------GT1 =================bZIP_DOF ---------->DOF2           --------->MYB59 ------->ANAC55(1)<-----------GT1  <-------------DYT1        --------->YAB1              <---------DEAR3(1) -AHL20(2)    <---------GLK1(2)    ------------->DYT1 --------->TOE2(3)      --------->AHL20(2) <---- >AHL20(2)    <---------ARR11(3) <-----------HVH21  --------->GLK1(2)<----------ID1     <---------ORA47(1)   cacctaatccattacagattttactaccattttaaagtcacgtgacttttacataatctaaaatcaaaagagcgaaaaataaaacaagaggtcggtacgg  5818700                                                                                                  <--                                                                                                  <--          --------->ATHB12                                                                        <--          --------->ATHB51                                                                        <--          <--------HAHB4                                                                          ===         --------->ICU4                                                                           <--         <---------YAB1                                     --------->YAB1                       <---       --------------->AGL15      ------>MYB46(1)          <-----------------AGL1               <---- ------MYB46(1)                   ------>MYB83           --------->YAB1              <---------HSFB2a(2) ------MYB83                 ------>MYB46(1)           <---------WOX13(1)            --------->HSFB2a(2) ------->MYB59    ----------->GT1 --------->MYB52(1) --------->ATHB12               <---------ANAC46 ------MYB52(1) ---------->DOF2 <---------MYB59     <-------TEIL               <---------YAB1  ------ ->SPL7<---------------AGL15 ------>MYB83         --------->TOE2(3)            --------->ICU4  ------ ----AtSPL3 <---------YAB1 --------->AtMYB61    <---------TOE2(3)  <---------ANAC55(2)       -------- -----SPL7<---------ICU4   <---------MYB59     <---------DOF5.7(2) --------->ANAC55(2)       <-------   ttcggtttagcattattagaaagtagaaaccaaaccaaactgaattggataacgttcattgatcagaataggtaataggtcatgtttctggtaatagctg  5818800  Previous    Next  AGI:  At5g17650.1    Description:  glycine/proline-rich protein Range:  from: 5816700    to: 5818349    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g17660.1    Description:  methyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO17868.1); contains InterPro domain Conserved hypothetical protein CHP00091; (InterPro:IPR004395); contains InterPro domain Putative methyltransferase (InterPro:IPR003358) Range:  from: 5818550    to: 5820866    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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