Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   <-                                                                                              <------                                                                                              -------                                                                                            ---------                          ----------->GT1                                                  <---------                     ---------->DOF2                                                     --------->ANAC58             <---------MYB52(2)                                                 ----------->GT1------        --------->ANAC55(1)                    --------->ANAC58               ----------->GT1 <------        --------->ANAC46--------->At4g35610    --------->ANAC58       ----------->GT1    --------->ANAC58    --------->AHL20(2)  <---------At4g35610    --------->ANAC46   <---------WRKY12       --------->ANAC46 ------>RAV1(1)   --------->TOE2(3)    ---------->DOF2            <<<<<<<<<WRKY18       --------->DAG2 ->ANAC46    --------->MYB46(3)    --------->At4g35610           --------->WRKY18(1)   ---------->DOF2   acacaattacatgtaacaaacattaaagctgaaaataagctcaaagaacaagccagaaccaattgaagtcaagggaaaaacagagaaaaaaaagcaacaa  5812900                                                                      <---------ICU4                                                                --------->ANAC55(2)                                                      ----------->GT1--------->ICU4 --------DAG2       <---------------AGL15       --------->MYB46(3)  --------->ANAC58             ---- ---------DOF2      <---------MYB59             <---------MYB52(2)  --------->ANAC58             ==== ---MYB52(2)        --------------->AGL15     ----------->RAV1(1)--------->LBD16                <---- -->MYB46(3)       ----------------->AG      <----------ID1     --------->ANAC58               <----- -->RAV1(1)        ----------------->AGL1  --------->ANAC58     --------->ANAC58               ------ -ID1       <------ZmHOX2a(1)              --------->ANAC58     --------->ANAC55(1)         <-------- ->GAMYB--------->ICU4                     --------->ANAC46     <---------ANAC55(2)      <---------YAB1 ------MYB.PH3(2)<-----------GT1   --------->YAB1------->GAMYB  --------->ANAC46      --------->GLK1(2)   actttatggaattaggattttaccaaaatgagtcaaataagaattaagcaacaaacctgttaaaacccgtaagcattagtttcaagacaatctgatagat  5813000            <---------ARR11(3)   ---------->DOF2 --------->ANAC58          ------>ZmHOX2a(1) --------->ANAC58      --------->ARR14(2) -->ZmHOX2a(2)         <---------ARR14(2)               <----------DOF2 =================================HOX2a_HOX2a           <---------DAG2 --ZmHOX2a(2)          <---------ARR11(3)      ----------->GT1         --------->AHL20(2) ----ARR11(3)          --------->ARR11(3)      <----------ID1    --------->YAB1 --->ARR11(3)  <----------DOF2              ---------->DOF2      --------->AHL20(2) ----------->GT1 - -WOX13(1)  --------->ARR11(3)----------->GT1--------->DAG2 <---------YAB1   ----------->GT1  <------   cccaagaaagtttagacctttgaaaaatcctctcgtaaaactcaaaaaaaggagaaaactttatcaataaaaaaaaaatatgtgaatagtgaaatggtgg  5813100                                                           <---------YAB1                                                       --------->ARR11(3)               --------->ARR14(2)                                                     <---------YAB1                     <---------ARR14(2)                                                     <---------TOE1(3)               --------->ANAC46 -------->GLK1(2)                    ---------->DOF2 <---------TOE2(3)             <-----------GT1 ---ANAC46                     <-------TEIL      --------->CCA1(2)             <<<<<<<<<MYB2  -------   agaatcaagagagagggaacataaacatgaaaattcgtagaaagaagagagatttaagattatgatgcgatttcgattttggttttcacagaaccccaaa  5813200                                                                                              <------                                                                                             <-------                                                                                            <--------                                                     --------->AHL20(1)             --------->ANAC58                                                     --------->ARR11(3)             --------->ANAC46                                                     <---------AHL20(1)             --------->ANAC58                                              ----------->GT1         <---------ANAC58     --------->MYB52(1)      <----------DOF2                   <---------ANAC46              <---------ANAC58  <------------CBF --->DOF2             <----------DOF2 <---------ANAC46                <---------ANAC46*TSS-----------   gagagaaacttttcttctctctctctttctctcgtttttgctgtgtataagtaaaaatattgaagaaaaattgtgtgatatttgctacgaaattgacggg  5813300                                                                           --------->TOE1(3)                                                                           --------->TOE2(3)                                                                           <-----------TGA1                                                                    ------>ZmHOX2a(1)<----------DOF2                                                                 <---------YAB1    ------->TEIL                                            ------->TEIL      <---------YAB1--------->DOF5.7(2)                                     ------>ZmHOX2a(1)     <---------AHL20(2) <---------DOF5.7(2) ---LBD16          ----------->GT1  --------->TOE2(3)      --------->AHL20(2)<---------WRKY12 --ANAC46      ---------->DOF2      --------->ANAC55(2)  <----------DOF2 <---------TOE2(3)        <-- -LBD16  --------->TOE2(3)       ---------->ID1  <-----------GT1<-----------GT1--------------->AtSPL8 >HVH21 --------->YAB1        --------------->AtSPL8   ------>ZmHOX2a(1)<-----------GT1        ------   gagaatataaacataaataaagggtttctatttttgttccttaatgcattttctctcctcttttattatccttttaacgtcaacgtactttacaaaaaca  5813400                                                                      --------->YAB1                                                                  ---------->DOF2                                                               <---------YAB1                                                             --------->YAB1                                                             <---------ICU4                                                            --------->ICU4                                                          <---------ICU4                                                          --------->ATHB51                                                          <--------HAHB4                                                          <--------ATHB1                                                          --------->YAB1                      <---------AHL20(1)                 --------->ICU4                      --------->AHL20(1)                 <---------ATHB12                   ---------                      <---------AHL20(2)                 <---------ATHB51                  <---------YAB1 -------GLK1(2)       --------->AHL20(2)                 --------->AHL20(2)              --------->YAB1 --->YAB1          --------->AHL20(2)         ----------->GT1-------->HAHB4      --------->WOX13(1) -   taatctcttcatttctccaaataatataatatgaaattcgactagtttctgtaaaatcaataattatgaaaagcataattcatccatcaaattatagtta  5813500                                                                         --------->AHL20(2)                                                                        <---------YAB1                                                                      --------->YAB1                                                                     --------->ICU4                                   <---------YAB1                    <---------YAB1                                  --------->AHL20(1)               -------->HAHB4                            --------->YAB1                         --------->YAB1                           ----------->GT1                         <---------ICU4                       --------->AHL20(2)                         <---------ATHB51                 ----------->GT1  <---------AHL20(1)         ----------->GT1         <---------AHL20(2) -->GT1 --------->ICU4 <---------AHL20(2)        <---------YAB1   --------->ICU4     --------->AHL20(2) ---------->GT1  <---------ANAC46 --------->AHL20(2)        ----------->GT1   <-------TEIL   tatagttaaaatgattttttcgtaaaaaaatgaaaatataatacaaaaaatatgatggaagatgggtaattatgattatatacataaaaaaatagaactg  5813600                        <---------AHL20(2)                        --------->AHL20(1)                                                --------->ANAC58                     --------->YAB1      --------->ARR11(3)                               --------->ANAC58                >>>>>>>>>RAP2.2          --------->AHL20(1)                               --------->ANAC46              <---------ARR11(3)         <---------ARR11(3)                  ---------->DOF2    -----             <---------CCA1(2)          --------->AHL20(2)            --------->YAB1   --------->ZAT18        <---------AHL20(2)   ----------->GT1            ----------->GT1 <---------YAB1 --------->ZAT14    <---------AHL20(2)  --------->AHL20(2)        --------->MYB46(3) <---------YAB1    <---------ZAT18   tagtttttattttatatatctaaaaataaaatggtttcttaaatatatactaacaaacatgttaatatgttatgatgcttaaagagttgtccactcaaat  5813700                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(1)    --------->bZIP60(1)                                                                  --------->ARR11(3)    <---------bZIP60(1)                                           <---------YAB1         <---------ARR11(3)  --------->YAB1           <---------YAB1  <<<<<<<<<<GT-3b  <-------TEIL                --------->YAB1 ---->GLK1(2) <-----------GT1       <-------TEIL           <-----------GT1 <---------GLK1(2)---------   tctatcacatcatatttttcatttttcttatacttatatacatatttttcttctgtcgaatatacattttgattttggattttcaaacaaaaatattctg  5813800  Previous    Next  AGI:  At5g17640.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17865.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65847.1); contains InterPro domain Protein of unknown function DUF1005 (InterPro:IPR010410) Range:  from: 5810937    to: 5813286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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