Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              <------                                                                                           <-------MYC2                                                                                           ------->MYC2                                                                                           <-------MYC3                                                                                           ------->MYC3                                                                                           <-------PIF4                                                                                           ------->PIF4               --------->YAB1                                                   --------->HSFB2a(2)              <---------YAB1                                                    <---------HSFB2a(2)          <---------GLK1(2)                     <---------ALFIN1         <---------ALFIN1  <-------PIF5       --------->YAB1                      <----------DOF2            --------->AtMYB61    <-------MYC4  ------>ZmHOX2a(1)                      ------>ZmHOX2a(1)           --------->MYB46(3)    ------->PIF5 ----->ZmHOX2a(2)                   ------>ZmHOX2a(2)              --------->ARR14(2)      ------->MYC4 -------ARR11(3)                  <---------ARR11(3)             --------->ANAC58       <------------OsbHLH66 ------>ARR11(3)                  --------->ARR11(3)             --------->ANAC58--------->LBD16   <-   gatcctgaatcagattattagaactactctcgttgtgatcttcctcttttccaccttcttcatccccaagaaccaccacattcccgaattgcacgtgctt  5797600                               <------ZmHOX2a(2)                              --------->ARR14(2)                            <---------ATERF1(1)                            --------->LBD16                          --------->ATERF1(1)                          --------->RAP2.3(1)                          <---------LBD16                          <------NtERF2                         ------>NtERF2                         <---------RAP2.3(1)                         <---------ERF1                         <---------RRTF1(1)                         <---------ATERF1(1)                         <---------RAP2.6(1)                        <---------RAP2.3(2)                        --------->DEAR3(1)                        <---------DEAR3(1)                       --------->RAP2.3(1)                       <------NtERF2                     --------->ARR14(2)          <---------------                       --------->ATERF1(1)             --------->LBD16              --------->ARR14(2)                      <---------ATERF1(1)      <---------ANAC46                     <---------ARR14(2)                     <---------DEAR3(1)     ----------->TGA1                      --------->LBD16                     --------->ANAC46       ----------->HVH21                   <---------LBD16                     ---------->CDC5      <---------ANAC58          <------ZmHOX2a(1)<------ZmHOX2a(2)                    ===================HOX2a_HOX2a    <---------HSFB2a(2)  <----------DOF2                    ==================HOX2a_HOX2a     --------->HSFB2a(2) <---------DAG2         <---------DEAR3(1)--------->DEAR3(1)------------>AtMYB77   ========================HOX2a_HOX2a    ------>MYB46(1) ------>ZmHOX2a(1)     <---------ANAC46  --------------------->WRI1------>ZmHOX2a(2)    ------>MYB83    <---------LBD16       <---------ANAC58------>NtERF2------>ZmHOX2a(2) ---ANAC58     <---------GLK1(1)  --------->LBD16    <---------LBD16=========================HOX2a_HOX2a ---ANAC58 --------->At5g28300<---------ARR14(2)   <---------ARR14(2)--------->ARR14(2)            -- ----------GT1 --------->GLK1(1)------>ZmHOX2a(2)  --------->ARR14(2)<---------ARR14(2)         <----   ctcaccttccctcggtgaattcctcggcgccggatccgaagttgtcgtgacggtttccggagccttgttaggatcgcctttctccggatcgaaactggta  5797700                                                                            --------->ANAC58                                                                   --------->ANAC58                                                                   --------->ANAC58                    --------->ZAT18                                --------->ANAC46                    --------->ZAT14     --------->ANAC58         <---------DOF5.7(2)                    <---------ZAT14     --------->ANAC58    <------ZmHOX2a(1)      ---------->DOF2           ---------->DOF2              --------->ANAC46 <-----------RAV1(2)--------->ANAC58 --AGL1  <---------YAB1              ----------->TGA1  --------->ANAC58--------->ANAC58    --------->MYB52(1) ----->GAMYB<---------TOE2(3)      --------->YAB1      --------->ANAC58--------->ANAC58<----------ID1 -----DOF5.7(2) --------->ALFIN1---------->DOF2      <------ZmHOX2a(1)--------->SPL7 ---------->DOF2-   acgctcttgctattaaagatggtgctctggctaacaaagatgacgcaaggtttgaggacgcaggagtaaacgtaagccaagaaccaaaagagccaaggga  5797800                                             --------->MYB52(1)                       --------->ARR14(2)             --------->ARR14(2)          <------ZmHOX2a(2)            <------ZmHOX2a(1)--------->CCA1(2)             <---------ARR14(2)         --------->ARR14(2)        ---------->DOF2     <---------ARR14(2)          --------->AtMYB61             <---------ARR14(2)      ------>ZmHOX2a(1)    <------ZmHOX2a(1)    ---------->DOF2                 <-------TEIL          --------->DAG2           <---------TOE2(3)  ------>MYB83  --------->ANAC46 <---------HSFB2a(1)     ---------->DOF2       ------>ZmHOX2a(1)  ------>MYB46(1)     --------->HSFB2a(2)==============================HOX2a_HOX2a--------->YAB1 ----------->RAV1(1)  <---------HSFB2a(2)====================================HOX2a_HOX2a<-------TEIL -------->AtMYB61  <----------DOF2<---------ARR14(2)<-----------RAV1(2)     ------>ZmHOX2a(1)--------   caccaacaaagaccatacccgcttgtagaaacagagggttcggatcagaacggaccaggtaaagtcctaaaaggactcctcctatgaggatacatgaaag  5797900                 ------->TEIL              ----------->GT1                               --------->AtMYB61           --------->ICU4                                   <---------ALFIN1      ----------->GT1            <----------DOF2           --------->MYB46(3)    <---------ZAT14             <---------DAG2          <---------ETT(1)                      -------    --------->ZAT14--------->KAN4(2)        ------>ZmHOX2a(2)                    --------->YAB1 -->DOF2 --------->YAB1     <------ZmHOX2a(2)       <---------GLK1(1)           ----------->GT1   gaagagaacagtgataatgtatattcttggatcaccttttctctgatccattcgatttccgaccactggttttgtaacagaaatgaaaattcagagaatg  5798000                                                                   <------MYB46(1)                                                                   <---------ANAC58                                                                   <------MYB83                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                  <---------AtMYB61                                          --------->LBD16         --------->MYB111(2)                    <----------DOF2      <---------HSFB2a(2)      --------->MYB46(2)                   <---------ANAC58     <---------LBD16      --------->DAG2                         <                   <---------ANAC58    <---------LBD16  --------->ANAC58                   --------->ZAT18        --------->YAB1    <----------DOF2--------->HSFB2a(2)---------->DOF2                <---------ZAT18 <----------DOF2 <-----------GT1<----------DOF2         --------->ANAC58                ---------->DOF2 -->GLK1(2)<---------GLK1(2)  ---------->ID1       ----------->HVH21 <---------REM1(1)---------->DOF2   tgtctttgaatcagaatttttgctttctctttttcttttttctcgggaaatttgtgacaaggaaaagtttggtgtaacagaaaactgaaaaagagcgcta  5798100          <---------MYB52(1)       <------NtERF2    <---------PCF2   --------->AHL20(2)    --------->ATERF1(1)     <---------AtMYB61   ------>NtERF2     <---------AHL20(2)                  <---------YAB1   <---------ATERF1(1)  <---------YAB1                <---------AHL20(2)  --------->LBD16 <---------AHL20(1)                  --------->AHL20(2)      <---------MYB46(3) ---------LBD16   --------->AHL20(1)     <---------At5g28300      <---------MYB46(3)        <--------   aacgcgggctccgtttttaatatataatttttggtcgctaaattactgcgaagagttttattagtgagtcgttgtgaagtttgttcgagtttttttacgc  5798200                                                               --------->LBD16                                                              --------->HSFB2a(2)                                                              <---------HSFB2a(2)                                                             <---------LBD16                                                         <---------AHL20(2)                       <--                         ----------->GT1                --------->AHL20(1)                       ----                     <------ZmHOX2a(1)                  <---------AHL20(1)                       <---                 --------->ICU4                         --------->AHL20(2)                      -----   ----------->GT1 --------->MYB59         ----------->ARR10<---------LBD16                    <----- ---GT1       <------ZmHOX2a(1)  <----------DOF2        <---------AHL20(2)            --------->ICU4   tctaagagtgaatataggaattaggaaatgtaaaacttttatggtgagatactacaaatttattcgggaaaattgattcaaaattggaatttttagtatg  5798300             --------->AHL20(1)             --------->AHL20(2)         <---------AHL20(2)                                         <---------MYB46(3)       <----------DOF2                                             <---------AtMYB61       ----------    <---------RAP2.6(2)                                      <----------DOF2     --------->YAB1   <---------LBD16                                   --------->ETT(2)           <---------YAB1      - -------YAB1 <---------AHL20(1)                      <---------ETT(2)        <---------AHL20(2)     < ----->ARR11(3)         --------->LBD16             --------->DDF1 --------->ALFIN1<---------YAB1  -- ------ARR11(3)  <-----------GT1        ---------->ID1     ------>MYB46(1)   --------->AHL20(2)  ---- ---->YAB1   <---------AHL20(2)       <-----------RAV1(1)  ------>MYB83 <------NtERF2      <---------ANAC46 ----YAB1--------->AHL20(2)   --------->WOX13(1)<---------AtLEC2 <-----------RAV1(1) ----------->HVH21   atatttgcggtttaattaattacctccagagtcagtcattttgttgtttttcatgtcgaccaactttctgtggtggcaatttatcatgagaccgcgtaaa  5798400                                                                    <---------DOF5.7(2)                                                                <---------HSFB2a(1)                                                                --------->HSFB2a(1)    --------->AHL20(2)                            ------->GAMYB------->TEIL                   <------ ->GT1     --------->ZAT6                        --------->MYB46(3)<-------TEIL               <------ -------->AHL20(1)                    <---------ANAC58   ----------->HVH21          ----------->HVH21 ---------AHL20(1)             <-----------GT1  -------->P  <---------MYB52(2)    <---------ANAC55(2) ------->AHL20(2)     ----------->HVH21        --------->WOX13(1) --------->DOF5.7(2)      <---------ALFIN1 ----->AHL20(2)    --------->TOE1(2)  <---------ANAC58   <----------ID1           --------->ANAC55(2)   aatatataaaataagactatacatgggacatatatacttatcgtgctatcaaccaagatgcgacgaacgttcacgatgtctaatacatgacctccacttt  5798500  Previous    Next  AGI:  At5g17590.1    Description:  prothymosin alpha-related. contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 5797373    to: 5797951    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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