Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            --------->LBD16             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          ------>ZmHOX2a(2)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <-----------------------TaNAC69(2)   --------->At4g35610                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------YAB1                         <------ZmHOX2a(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                        <---------ARR14(2)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                        ------->TEIL                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)               --------->TOE2(2)       ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)               --------->TOE2(3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)               --------->TOE1(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           ------->TEIL              <---------ANAC55(2)<xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <---        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        ----     ---------->DOF2    --------->ARR14(2)  <-------TEIL<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <---    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->ZAT6   tctaatctaaagaaatacctaagatggatccgaaaattgcataaagtccatttttcatcaacatcatcagagactatataacatatgtacttaacacaaa  5749400              <---------ICU4             --------->ICU4           --------->ANAC55(2)           <---------ANAC55(2)        <------ZmHOX2a(2)                                             ----------->GT1       <---------ARR11(3)         <---------YAB1                      <---------ANAC58       --------->ARR11(3)       --------->YAB1                        <---------ANAC46      --------->YAB1  <----------DOF2               --------->MYB46(3)<---------ANAC58   ---------->DOF2    --------->TOE2(3)            >>>>>>>>>>>>>>>>>LFY       --------->YAB1 ------AHL20(1)      <---------ICU4         <---------ARR11(3)    <---------ANAC58                  - ----->AHL20(1)  <---------AHL20(2)         --------->ARR11(3)    <---------ANAC58              ----- ------ARR11(3)  --------->AHL20(2)        <---------CCA1(2)     <---------MYB46(3)             <----   atattcaaagatcacataattaatctttaatctattatgagtccaatatctcaaaccactggcaaattggttgagtgaaaacataatgcatcagaaattt  5749500                                                                                                    <                                              --------->ANAC58                                      -                                              --------->ANAC58           <---------MYB46(3)         <                                          <---------HSFB2a(2)           <---------AtMYB61     -------                                          --------->HSFB2a(2)    ------->GAMYB              <--------        <-----------GT1 <-----------GT1   ------>ZmHOX2a(1)   <-----------GT1<------NtERF2 --------->AHL20(1) ---------->HVH21   --------->TOE2(3) <---------ARR14(2)     ----------->HVH21           --------->ICU4 ---->AHL20(2)      --------->TOE1(3) --------->ARR14(2)   <---------ANAC55(2)   <---------DAG2    <- -----AHL20(2)  <---------GLK1(2)     --------->GLK1(2)    --------->ANAC55(2)   <----------DOF2  ---   atatgacatattacatcagaaactttaaactcgacttgagaatcctcgaagcaaaaacaatatgtaaccgagcattggtggcacttttgcaaatattatg  5749600                              <---------MYB52(1)                              --------->ARR14(2)                <---------ANAC58               --------->ICU4                           <----------DOF2                <---------ANAC58               <---------YAB1               <---------AHL20(2)     --------------------->WRI1           ----------->GT1        ----------->GT1    <-----------GT1 ----------DOF2--------------->AtSPL8     --------->YAB1       <---------ANAC46 --------->AHL20(2) -------------->AGL15         <---------ARR14(2)--------->YAB1 <---------LBD16  <---------AHL20(2) ---------------AGL15       --------->LBD16  --------->YAB1    <---------ANAC58<---------AHL20(2) -------->AtSPL8<---------ANAC46  <----------DOF2      --------->TOE2(3)    --------->AHL20(2) -YAB1         <---------------AtSPL8 <---------AHL20(2)       <---------ANAC58<---------AHL20(1) ----------------AGL3       --------->ANAC46<---------YAB1    <---------LBD16  --------->AHL20(2) ---->TEIL     --------------->AtSPL3--------->AHL20(2)--------->TOE1(3)   --------->AHL20(2)   gactttatttagaaattttcgtacaaaaccccgatacttttaaattgtaataataaaccctaatttcgggtaaaattttaaattatttacctttagggac  5749700                                                                *TSS                                                              <---------ATHB12              --------->TOE2(3)                             --------->WOX13(1)            ------->TEIL                                  ------------>CBF    -------->HAHB4                  <---------AtMYB61   <----------DOF2    --------->YAB1               <----------DOF2      --------->At4g35610   <---------YAB1                <---------DAG2       <---------At4g35610<---------CCA1(2)      <---- --------->YAB1                 <---------DAG2   --------->YAB1--------->YAB1                 <------ZmHOX2a(1)   ctataatgatactgaaccctaattaacaaaaaccccttttggtctctgtaatcgtaagctttcaatcaaaaacccaaatctctctgttcgcagagaggat  5749800                                                               --------->ANAC58                ------                                                    --------->ANAC58                          <------                                                    --------->ANAC58                          -------  <---------ANAC58        <---------ZAT6<---------DOF5.7(2)    --------->ANAC58          --------->MYB52(1)  <---------ANAC58      <---------At5g28300         --------->ANAC46                  <---------At4g35610 --ZmHOX2a(2)  --------->GLK1(2)        --------->MYB52(1)   <------ZmHOX2a(1)        --------->At4g35610   caattcgtgattcagagaatcaaacttactgtgagagagagataacgaagatggacgctatgaggaagcaactcgatgtgctcatgggagctaacagaaa  5749900                                                                                             <-------    <-----------HVH21                                                                        <-------   --------->bZIP60(1)     --------->TOE1(2)        <-----------GT1                       --------->MYB52(1)   <---------bZIP60(1)  <---------ARR14(2)        <----------DOF2               <---------DAG2   --------->bZIP60(2)  --------->ARR14(2)     ------>NtERF2            ----------->HVH21 <---------- --->MYB52(1)   --------->WOX13(1)             <---------RAP2.6(3)  ------>NtERF2         ----------- ---ARR14(2)   <---------WRKY12              ---------->ID1         <---------ZAT18      ----------->HVH21 -->ARR14(2)  --------->WRKY18(1)        ----------------------->TaNAC69(2)     <----------DOF2 <----   cggcgatgtcactgaggtcaatcgcaaatactacgaccgcgatgtttgccgtctttacctctctggtctctgccctcacgagcttttccaattgacggtt  5750000                                                                      <---------ANAC46                                                                    <---------ARR11(3)   --------->AHL20(2)                                               --------->ARR14(2)   <---------AHL20(2)                                               <---------ARR14(2)            --- --DEAR3(2)                     <----------DOF2                     --------->ARR11(3)            <-- --MYB46(3)             <---------MYB59                 <----------DOF2                          ---- -GT1                  --------->ANAC58                <---------ANAC58                     ------>ZmHOX2a(1) ->AtMYB77             --------->ANAC58   <----------DOF2   <---------YAB1              <-----------GT1 ---TEIL<-------TEIL<<<<<<<<<<GATA-1 <<<<<<<<<TBF1     <---------ANAC58           --------->TOE2(3)   cgtatttatattcatcttcttcgatacccaattcctttcttcttcttttgctcaatggctttctcattagtatcttggaaaaaaacttaatttcctcatc  5750100                                                                                                  <--                                                                                               <-----                                                                                              <------MYB46(1)                                                                                              <------                                                                                             <-------       <----------DOF2                                                                  <---------LBD16     <---------At4g35610                                                        <---------ANAC58 <---     --------->At4g35610                                                       --------->STY1(2) ----   <---------ZAT18--------->DAG2                                             ------>ZmHOX2a(1)<------MYB83 --->ZmHOX2a(1)  ---------->DOF2               <---------REM1(1)  --------->TOE2(3)    --------->ALFIN1 --------DOF2<-------TEIL                     <---------TOE2(3)  ----------->GT1<---------ANAC58<---- ----->TOE2(3)--------->YAB1               <---------WOX13(1)   <---------TOE2(3)  --------->ATHB12   ctttgtgagctttgattcataaagttttagtattggtatgtgttaattgatgtagttgttttggataatgttaaaaatcctagcttgatttgggggaggt  5750200                                                                                                 <---       --------->ANAC55(2)                                       --------->YAB1            ----------       ----------->GT1                                          <---------YAB1          -------------      --------->MYB59                                         --------->YAB1         ------>ZmHOX2a(1) -----GAMYB                                                --------->YAB1           <---------ANAC58 --GAMYB                                                   <---------ICU4           <---------ANAC58 ---MYB46(3)                                              --------->ICU4         <---------PCF2  ---- --AtMYB61                 <------MYB83                <---------YAB1       --------->CCA1(2)    ---- ------MYB46(3)<-----------RAV1(1)          ----------->HVH21<---------YAB1 <---------GLK1(1)    <--- ----->MYB111(2)  ----------->GT1<---------YAB1      <---------MYB46(3)    <---------ARR14(2)    <--- ----P<---------TOE2(3)    <------MYB46(1)<----------DOF2 <---------YAB1   --------->ARR14(2)--------   tgttgatttaggtaacaatgtggctaatttggtttatgagtagtctttgacatgtttgttattattatcagaaaatggatatgggtccttgcccaaaggt  5750300  Previous    Next  AGI:  At5g17440.1    Description:  LUC7 N_terminus domain-containing protein. similar to UNE6 (unfertilized embryo sac 6) [Arabidopsis thaliana] (TAIR:AT3G03340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22940.1); contains InterPro domain LUC7 related (InterPro:IPR004882) Range:  from: 5749764    to: 5753645    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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