Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <-------TEIL ----------->GT1                                                                    <---------ATHB12 -------------->AtSPL8                                                        --------->ANAC46 ---------------AtSPL8                       <-------TEIL                --------->ANAC46 ------>DOF2           <-------TEIL     --------->AHL20(2)             --------->ZAT6 ->YAB1   --------->AHL20(2)        <---------TOE2(3)              --------->MYB46(3) -->GT1   <---------AHL20(2)   <-----------GT1               <---------ANAC55(2) <---------ALFIN1  --   aaagggtacaaaataaatgtctagtttcatgttttactaagtttaaattcatgagatgtgatcatgtgaacaaacactaaaccccactcatggaaattct  5745200                                               <---------ANAC46                                               <---------ANAC58                                               <---------ANAC58                                              <-------TEIL                                           <---------TGA1a                                           <---------ANAC58                                           =============================bZIP_DOF            ----------->GT1                --------->TGA1a                           <----------ID1    --------->CCA1(2)                      <---------ANAC58                          ----------->GT1 -------->DOF2         --------->YAB1      <---------ANAC46  <----------DOF2        ----------->GT1   caaaagagatgaaatcgataaacaatgaaaaacaaaaatagggctacgtgcgtgagtcttggtctttgttctatgcattggaagaaggggaaaaaataac  5745300                  <---------ARR11(3)                  --------->AHL20(1)                  --------->ARR11(3)              --------->YAB1                 <---------AHL20(2)               --------->ATHB51                --------->ANAC58             --------->AHL20(2)                   -------->ATHB1             ----------->HVH21             <---------AHL20(2)                  <---------YAB1    <---------HSFB2a(1)           ----         --------->AHL20(2)                   <---------YAB1       <---------HSFC1(2)       ---------      --------->YAB1                 <---------LBD16               --------->HSFC1(2)---------->DOF2   ---------->DOF2<---------AHL20(1)<---------LBD16             ---------->DOF2   --------->ANAC58   aaaaacaaagataaaataaatatttttaaaacacaaacctcgggagtgactattattgtctctggtgaaagcttcgagggtgacaccgaaaggagaaaga  5745400                                                                                     <---------ANAC46                                                                               <-----------RAV1(1)                                          <------ZmHOX2a(2)                 --------->ARR14(2)                                         <---------ARR11(3)                 <---------ARR14(2)                                         --------->AGP1                     --------->GLK1(2)                                        --------->At4g35610           --------->ANAC46                                    ------>NtERF2                <---------ARR11(3)<---------MYB46(3)                                  --------->ATERF1(1)           --------->REM1(1) <---------AtMYB61                                 <---------ATERF1(1)          ----------->RAV1(1) --------->ALFIN1  -          --------->ANAC58       --------->At4g35610       --------->LBD16 <-------GAMYB           <-          --------->ANAC58       <---------At4g35610       ------>NtERF2  <---------DEAR3(2)      --- <---------ARR11(3)     <---------At4g35610              <---------LBD16  <---------MYB46(3)     ---- --------->ARR11(3)  <-------TEIL--------->ATERF1(1)--------->ZAT14   <---------DEAR3(1)  <------ZmHOX2a(1) ------>DOF2   <---------At4g35610<---------RAP2.6(2)    --------->SPL7  <---------DEAR3(1)   <------ ->DOF2   --------->ANAC46      --------->ALFIN1    <---------ZAT18  <---------LBD16 --------->ALFIN1   aaagatgtttgaacggcagaagattcatcggagggagcggccagatcaaaacagtaccctccggcaacatctacggcggttctggtggtggaggagtcaa  5745500           <---------YAB1           --------->ICU4    --------->SPL1(2)    --------->SPL7   --------->SPL1(1)   <---------MYB52(1)   <---------SPL1(1)  <---------SPL7  <---------SPL1(2) <---------ANAC58    <---------ICU4 <---------ANAC58    --------->YAB1 -------------->AtSPL3                                                         <---------MYB111(1) -----------------SPL14                                               <---------AHL20(2) --------------->SPL14     <------ZmHOX2a(1)      <---------MYB52(1) --------->YAB1 ----->MYB46(3)  <---------YAB1              -------->P            --------->AHL20(2)    <---------YAB1 ---WRKY38(1)--------->ARR11(3)           <---------MYB59      <-------TEIL  <-----------GT1<--------   catccgtacggtgatgattttgatcatgaggagagagagagaagcctaaccagttattcatcgagttcatataatattctaactactccttgtgatagat  5745600                    --------->ARR11(3)                ---------->DOF2                                     ----------->GT1             <------ZmHOX2a(1)       --------->AtLEC2      <---------TOE2(3)                       >>            <----------ID1        <-------TEIL     ---------->DOF2  <---------ZAT6              >>>>>     >>>>>>>>>TBF1  <---------ARR11(3) <---------AtLEC2  ---------->DOF2                     >>>>>>>> -WOX13(1) ----------->GT1    <---------TOE1(3) <------ZmHOX2a(1)<---------AtMYB61       <------ZmHOX2a(1)   gagagaagaagaataggaaaaagaacttagttagggttcatgcatgaagaggagaaagaaaaaggttttggtgttaaatgaagagagaagaggaagaaga  5745700                                                                                                <----                                                                                              <------                                                                                              <------                                                                                         <---------AHL20(1)                <---------AHL20(2)                                                       --------->ARR11(3)               <---------AHL20(2)                                                     --------->AHL20(2)               <---------AHL20(1)      <------NtERF2                    <---------AHL20(2) <---------ICU4     ----------->GT1                  ----------->RAV1(1)               --------->AHL20(2)--------->AHL20(2)   ---------->DOF2    <-------TEIL    ------>NtERF2 <----------DOF2    <---------AHL20(2)<---------ARR11(3) >>>>>>>TBF1   --------->AHL20(2)    ----------->HVH21                 --------->AHL20(2)--------->AHL20(1) >>>>TBF1      --------->AHL20(1)  <---------ATERF1(1)       --------->GLK1(2)  ---------->DOF2 <---- >TBF1      --------->AHL20(2)   --------->LBD16<---------LBD16   ------------>CBF----------->GT1   agaagaaaagtcaaaaatataatgttcatttcttccgaggcgacatattatgcgcatttagagaattttgcaattaaattcagaaagaaaaaatatttac  5745800                                  --------->ALFIN1                       <---------DEAR3(2)                       <------MYB46(1)                       <---------MYB46(3)       --------->ALFIN1<------MYB83 <------MYB83 -----ANAC58          <---------DEAR3(1)                        --------->GLK1(2) ---AHL20(2)         <---------ORA47(1)          <---------ANAC58   <---------ANAC55(2)          <--- -----GT1         <---------AtMYB61 <------MYB46(1)        ----------->GT1                       ---- -----ANAC58    <------------CBF  <--------P     <---------ANAC58   --------->ANAC55(2)        <-----   ttgaaaaatgtggagatgtattggtcggtttgaagggtaggggtagtaatgtcgtttcaactggataatctcgtaatcccaatttgttttgatgacactt  5745900      --------->WOX13(1)    <---------ATHB12                                                                                <  --------->WOX13(1)                                                                              <-- --------->AHL20(2)                                               --------->TOE2(3)      ----------->GT1 <---------AHL20(2)                                              ----------->GT1        ----------->GT1 ------AHL20(2)                 <----------DOF2         <---------ANAC58          <---------------AGL15 ----->AHL20(2)         <-----------ARR10               <---------ANAC46         ----------------->AGL1 -----DOF2             <---------CCA1(2)                <---------ANAC58      <----------ID1   <-----   taattaatcagtcaaaaaccatttcaaatctctgctttctgtctctctctctcttcatgcgtataaaatgttaaatgtaaatgacaaaaatgggtaaaca  5746000           --------->YAB1                                                                           -    <------ZmHOX2a(1)                                                                               - ---------ANAC46                                     --------->YAB1             ------->TEIL -------- ---------HVH21                                     --------->ICU4          <-------MYC3  --------->TOE1(2) ----ICU4  ----------->GT1                          <---------ATHB12        ------->MYC3------->TEIL-   tgtcgaggaccaatagtaaaatccaaaaactcactcgttgtcgatttaagaccaatgatgctgtgtctcttagagacatgtgtatgtgtgaacgtatgac  5746100  Previous    Next  AGI:  At5g17430.1    Description:  DNA binding / transcription factor. Identical to AP2-like ethylene-responsive transcription factor BABY BOOM (BBM) [Arabidopsis Thaliana] (GB:Q6PQQ4;GB:Q8LSN1;GB:Q9LF42); similar to PLT2 (PLETHORA 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51190.1); similar to Protein BABY BOOM 1 (BnBBM1) (GB:Q8L3U3); similar to Protein BABY BOOM 2 (BnBBM2) (GB:Q8LSN2); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 5742544    to: 5745570    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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