Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------YAB1                                                                                         -------->ATHB1                                                                                         <---------ICU4                                                                                         --------->YAB1                         --------->AHL20(2)                                             --------->AHL20(2)                    --------->ARR11(3)                                                  --------->AHL20(1)                   --------->YAB1                                                       <---------AHL20(2)                  ----------->GT1                                                       <---------YAB1             ----------->GT1                            ----------->RAV1(2)       ------>MYB46(1)  <-          <---------ATHB12   --------->AHL20(2)  ----------->GT1                  ------>MYB83     --    --------->GLK1(2)    --------->YAB1     <---------AHL20(2)                   ----------->RAV1(1)   <---------GLK1(2)<---------ARR11(3)      --------->AHL20(2)               <-----------GT1  <------ -------->DOF2  ---------->DOF2  ----------->HVH21    <-----------GT1    <---------YAB1 --------->ICU4   aaaaagattctaatgaagtaaagataataaaaaaaatgacagcgattaaaatggttaaacctgacttctcaacttaatattaccaacaaaattattatgt  5741100                                     --------->MYB46(3)                             --------->ATHB12                        ----------->RAV1(1)               ------->TEIL  <---------ICU4          --------->CCA1(2)  --------->ATHB51         --------->ARR11(1) --------->ICU4                            --------->YAB1             ----         <---------ARR11(3) <---------YAB1                      ---------->ID1                  <----     ---------->DOF2   --------->REM1(1)               <---------AHL20(2)       <---------YAB1 <----- --------At4g35610   <---------HSFB2a(2)               --------->AHL20(2)--------->YAB1        ------ ------->At4g35610   --------->HSFB2a(2)              <---------YAB1 <---------YAB1           ------- ---YAB1 --------->ARR11(3)--------->TOE2(3)      <---------GLK1(2)--------->YAB1            --------   ttgctaacaaagatatgaattttctacaacattattgcaactacagaatacagattataaatttttgtctcataataagaagatgattttaaaaaatgat  5741200                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                        <-----------GT1    <---------YAB1                                                  <---------AHL20(2)   <---------AHL20(2)                                               --------->AHL20(2) ----->YAB1                                                         --------->AHL20(1) -----YAB1                                         <----------ID1--------->YAB1   <------MYB46(1) ----ARR11(3)                               ------>MYB46(1)      --------->AHL20(2) --->ARR11(3)          ------->TEIL         ------>MYB83        <---------ATHB12  <------MYB83 -->YAB1         --------->TOE2(2)     <-----------GT1          <---------ATHB51  ----------->GT1 ->ICU4          --------->TOE1(2)  --------->YAB1 ----------->GT1  <---------AHL20(1)              <   catatttttattcccaaaacatacgaatttttaaaaaatagtaaccaaataaaacgaaaaaatgcaataatattttactagcgttggtaaaaaaaaactt  5741300                                                                                   <------NtERF2                                                                                 ----------->HVH21                                                                                 <---------ETT(2)                                                                               <---------ATERF1(1)                                                                               --------->LBD16                                                                              --------->TOE1(2)                                                                              --------->DEAR3(1)                                                                             --------->DEAR3(2)   <--                                                                            --------->MYB52(1)------>NtERF2                                                                        --------->YAB1      ---------                                                                       <---------YAB1      <---------ATERF1(1)                     ----------->GT1                                <---------MYB52(1)    <---------DEAR3(1)                 --------->AHL20(2)             ----------->TGA1   <-------GAMYB--------->RAP2.3(1)               ----------->GT1                 <---------WOX13(1)<---------TOE1(3)----------->RAV1(1)              --------->DAG2                <---------YAB1       <---------TOE2(3)------>NtERF2   --- --------P   ---------->DOF2          <---------YAB1             <---------ANAC46--------->DEAR3(1)   tggtaagtgatgagaaaaagtaaatgtgaaaaacctcttcatggttgtgaatgacgactagttcattacggttatgagaaccggcgacaagaccggcgct  5741400                <------NtERF2                --------->LBD16              <---------LBD16            <---------SPL7           <---------RAP2.6(2)  ------>ZmHOX2a(2)          --------->SPL7   --------->At4g35610                --------->CCA1(2)          --------->RAP2.6(3)  <------ZmHOX2a(2)       --------->WOX13(1) -------At4g35610       --------->At4g35610  --------->MYB52(1)            <------MYB46(1) >RAP2.3(1)<---------DEAR3(1) --------->ARR11(3)     <---------YAB1*TSS    <------MYB83        <----- ------>At4g35610<------NtERF2<---------ARR11(3) --------->At5g28300      --------->MYB59 ---------->DOF2   agcttccatagggacggccggagattagcagcgatcttgagagaacaaaacggtgatcaatgagagacgaataagtttggtttttatgtgtgaaaagctt  5741500                            <-------GAMYB                           --------->MYB52(2)                  <---------ANAC58                           <---------MYB46(3)                  <---------ANAC58                   <-------TEIL                     --------->ANAC58                ----------->GT1                ----------->GT1                     --------->ANAC58           <----------DOF2         --------------->AGL15<---------REM1(1)   ---------->DOF2       <---------AHL20(2) -----DOF2     <---------------AtSPL8     <------------CBF  <----------DOF2 <-----------GT1  --------   ttagtttctctctctgtatggtacatagtttgttgtagagtctccattgccttcaagctaagctttcgttttatattatttcttttttgtaaaaacaact  5741600                                                        ----------->HVH21                                                      --------->At4g35610                                                   --------->ZAT2                            ------->GAMYB          --------->At4g35610                           <------------MYB.PH3(2) <---------ZAT2                           <---------MYB52(2)      <---------At4g35610                           --------->MYB46(3)      ----------->RAV1(2)      <-----------HVH21      <-        <---------ICU4   ----------->RAV1(1)     <-----------RAV1(2)    --------->YAB1  ------>ZmHOX2a(1)       --------->ICU4 ------->GAMYB            <-----------HVH21     <----------DOF2   --------->TOE1(3)  ----------->GT1  --------->MYB52(1)         --------->WOX13(1) <----------DOF2       --------->TOE2(3) ->MYB52(1)     --------->ANAC46             <-------TEIL  <---------bZIP60(2)  <------NtERF2<-------   gttttagtaaaaatttctacacaactgcaacaaactcatcactcacatccatcagctgatgacatgtctttctttcatcgtcgcggtttccttaagcttc  5741700                                                                           --------->YAB1                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)         ------>ZmHOX2a(1)                                              <---------ICU4         <----------DOF2                                               --------->ICU4     <-----------GT1                                                <-----------GT1    <-----------GT1                                                 <---------YAB1                  <  ----------------------->TaNAC69(2)     ------>ZmHOX2a(1)       <---------YAB1          <---------AHL20(2) ---------DOF2                   <-----------GT1               --------->YAB1            --------->AHL20(2) --GLK1(2)   <---------AtLEC2<-----------GT1                  <---------YAB1        <-------TEIL-----   tcttttttatcctttgcaggtctctctcattttacttactgtcctaatctcatttccttctgttttcattatactaattatatatgttcattttattcaa  5741800          <---------YAB1         <---------AHL20(2)       <---------YAB1     ------>ZmHOX2a(1)                                                     <---------AHL20(2)   ------>ZmHOX2a(2)                                                   <---------YAB1  <------ZmHOX2a(2)                                                    <---------AHL20(2)        ---- <---------ARR11(3)                                                   --------->AHL20(1)        ----- <---------ARR14(2)                          <---------ARR14(2)       --------->AHL20(2)       <----- --------->ARR14(2)                          --------->ARR14(2)       <---------AHL20(1)    <-------- --------->ARR11(3)                    <-----------GT1 <---------YAB1--------->YAB1        --------->AHL20(2) ------ZmHOX2a(1) <----------DOF2  <---------------AGL15       ----------->GT1     <---------CCA1(2) ----->DOF2  <-----------GT1       --------------->AGL15  <---------YAB1--------->YAB1    <---------YAB1   aaggatcctattattttaccctttaacaaaaaaaaaactatatacagtatatgcatgctgataattcgtaaatataataaatctggtatcttattatata  5741900                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                <---------ANAC58   <-                                                       <------MYB83             <---------ANAC55(2)<-                                                       <---------ANAC46         <---------ANAC58   --    ------>ZmHOX2a(2)                                  <------MYB46(1)--------->ANAC58             <-   --------->At4g35610          <---------YAB1        <---------AtMYB61       <-----------GT1     ---   <---------At4g35610         <---------AHL20(2)     --------->MYB46(2)   --------->ANAC58       --- ----->DAG2                    --------->AHL20(2)     <---------MYB46(3)   --------->ANAC58 ------>ZmHOX2a(1) ----->DOF2                   --------->AHL20(2) <---------TOE1(3)    --------->ANAC58      <-------- ----AHL20(2)                 --------->YAB1     <---------TOE2(3)    --------->ANAC46     --------->TOE2(3) -AHL20(2)            --------->ICU4           <--------P      <------ZmHOX2a(1)--------->ANAC55(2)<-   aagtgatcggccaaaatactagtaattttgaattaaaattagttagggggtaaggtttggtgagaggagtgcaagccaagttacgttccctgtccttaat  5742000  Previous    Next  AGI:  At5g17420.1    Description:  IRX3 (IRREGULAR XYLEM 3, MURUS 10); cellulose synthase. Identical to Cellulose synthase A catalytic subunit 7 [UDP-forming] (CESA7) [Arabidopsis Thaliana] (GB:Q9SWW6;GB:Q9XHP6); similar to CESA1 (CELLULOSE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to CESA3 (CELLULOSE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to CESA2 (CELLULOSE SYNTHASE 2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G39350.1); similar to cellulose synthase 3 [Eucalyptus grandis] Range:  from: 5736632    to: 5741467    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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