Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   -------->P  --------->ANAC58                                 ------>MYB46(1)                                 ------>MYB83--------->ANAC46                                --------->MYB55(1)                                <---------ALFIN1                               <---------MYB55(2)                               --------->MYB46(3)                               --------->DEAR3(1)                              --------->ANAC58     --------->ANAC46         --------->ANAC46   <---------ALFIN1           --------->ANAC58--------->LBD16 ----------->RAV1(1)         ------->GAMYB   --------->ANAC58 ------>ANAC46        --------->LBD16   <---------WRKY38(1) ------>ANAC58    --------->ARR11(3)    --------->WRKY38(1) ------>ANAC58    --------->ARR14(2)    --------->ETT(2)                                           <- ------>bZIP60(1) <---------ARR14(2)    <---------ETT(2)                                        ----- ----->TGA1      --------->GLK1(1)    <-----------HVH21                                       ------- ----->HVH21     --------->KAN4(1)  --------->LBD16       <------ZmHOX2a(2)           --------->GLK1(1) --->RAV1(2)    <---------KAN4(2)--------->MYB52(1) --------->At4g35610               <---------GLK1(1) ->At4g35610    ---------->TaMYB80<---------LBD16   --------->ZAT2             <---------ATHB12 <----   acgcaacacatcagtcggaatatccagataacacccaccgggtcgacccgaaacagctcgatccaaaaccctagaaacacaatcagggatttcacgaaca  5726300                                                                     --------->MYB46(3)                                                                     --------->ANAC46                                                             --------->GLK1(1)                                  --------->MYB46(3)     <---------HSFB2a(2)                                 <---------At5g28300     --------->LBD16 --------->AtMYB61                        ---------->DOF2                  ------>ZmHOX2a(1) ------>MYB46(1)     <----------DOF2 <---------HSFB2a(2)                 --------->HSFB2a(2) <---------ARR11(3)     <---------DAG2  --------->HSFB2a(2)                <---------LBD16 --------->MYB46(3) ---------DOF2       --------->HSFC1(1)                ----------->RAV1(2)----------->RAV1(1) ---->ARR11(3)       <---------HSFC1(1)     ------>ZmHOX2a(2)<---------GLK1(1) >TEIL      --------->YAB1      <-----------GT1        ===============================RAV   --------- -----ARR11(3) <---------ICU4<----------DOF2====================HOX2a_HOX2a------>MYB83     ---------   tctttcgctttctctgataatttcgagaaagctttaaccgcttcgatctgatcaagctcctggaaatctccacgaccaacatctctctgatcacaagaac  5726400                                                                               ----------->GT1                                                                            --------->ARR14(2)                                               --------->LBD16           --------->ANAC58                                              --------->ANAC58           --------->ANAC46    <-------                                              --------->ANAC46           --------->ANAC58 <---------GLK1(1)   <------ZmHOX2a(2)                          --------->ANAC58        <---------ARR14(2)  --------->GLK1(1)  <---------ARR11(3)                         <---------LBD16          --------->ARR14(2) <---------ARR14(2)  --------->ARR11(3)                       --------->ARR14(2)       --------->LBD16      --------->ARR14(2) --------->GLK1(1)                         <---------ARR14(2)      --------->ANAC46     <------ZmHOX2a(1) >ANAC58                               ---------->DOF2            <---------LBD16<---------MYB52(1) < >ANAC58                 <-----------GT1 ----------->ARR10      -------->P  <---------ARR14(2) ------   cagagatcatcaccatcggccatgtattaacccaagcgttggaaagacccgcgagcccatgaacacaacccggacccgaaaccgttaaaaggatacccgg  5726500                                           <---------HSFB2a(1)                                           <---------MYB46(3)                                     <---------At4g35610                                --------->ARR14(2)                             <---------ANAC46                             <---------ANAC58                   <---------ZAT2   --------->MYB52(1)                <---------MYB52(1)--------->MYB46(3)--------->HSFB2a(2)              --------->ZAT2     <---------MYB52(1)   <---------DEAR3(1)    <-------GAMYB                        <---------ZAT2    <-----------HVH21    <---------At4g35610   --------->MYB52(2)             --------->ANAC58    --------->LBD16<---------At4g35610     --------->KAN4(1)                  --------->ANAC58   --------->ANAC46--------->At4g35610   <---------ARR14(2)                 =========================  <---------LBD16--------->SPL7 <---------ARR14(2)  <---------HSFB2a(2)     ---------->DOF2 --LBD16      ------->GAMYB <------NtERF2--------->ARR14(2)               --------->TOE2(3)   <------ -----------------AGL1---------->DOF2--------->At4g35610                  <---------MYB59     ------- --->LBD16 --------->MYB52(1)<---------ANAC58  <---------MYB46(3) <xxxxxxxxxxxxxxxxxsmallRNA(le3)   tttacccgtgaggtaaccgtaagctgaagcggcgtaaccagcggattgttcgttgtggaaggcgatgaaacgtatacctaaagccatagctcggctagct  5726600            --------->GLK1(1)       <---------ANAC46       <---------bZIP60(2)       <---------O2     --------->MYB52(1)    ----------->TGA1    ----------->HVH21   <-----------HVH21  <---------bZIP60(1)  <---------bZIP60(2)  --------->bZIP60(1)  --------->ANAC55(2)    --------->DEAR3(1)  <---------O2          <------NtERF2  --------->TGA1a      ------>NtERF2                               --------->O2                   <--  <---------TGA1a     <---------DEAR3(1)                           <---------O2                  <---  <---------ANAC55(2) --------->DEAR3(1)                   <---------ANAC58                    <-----  --------->O2      ------->GAMYB                          <---------ANAC58                    <-----  <---------ANAC58 --------->MYB46(3)                      <---------bZIP60(2)                 <-----  ==========================MYC_MYB                        <---------O2  --------->HSFB2a(1) --------  ==========================MYC_MYB  --------->ARR14(2)    <---------TGA1a               <---------DREB2C(2)  <---------ANAC58 ----------->HVH21=================================MYC_MYB             <---------DEAR3(1) <-----------------------TaNAC69(2) <-------GAMYB          <---------ANAC46            --------->MYB52(1) ===========bZIP_DOF=================================================MYC_MYB          ----------->HVH21 ---STY1(2) <---------ARR14(2)  <-------MYC3          ----------->GT1    <---------HSFB2a(1) <------- -->STY1(2) --------->ARR14(2)  ------->MYC3------>NtERF2 <-----------------------TaNAC69(2)---------   agagacgtgacggggattccaacgacgccgaacatgtgggttacgccgagatgagagagtgacttggccacgagaacgttgccatcaattgacggtggag  5726700    <---------YAB1 -------MYB46(3)                                                        --------->AHL20(2) ------AtMYB61                                                          <-----------TBP ----ANAC58   --------->LBD16                                         <----------DOF2 ----ANAC46   ------>NtERF2                                           <---------------AGL15 ----ANAC58  --------->ANAC58                                         --------------->AGL15 ->ZAT14     --------->ANAC58 <---------GLK1(1)              <----------DOF2 --ZAT14     --------->ANAC46<---------ARR14(2)             <---------ANAC58     <----------DOF2 >ALFIN1    <---------LBD16  --------->ARR14(2) *TSS        <---------ANAC58    <---------DAG2   <---   tggtttctgatttatccgccatgttctcttggatttgctcaaagtttcagtttcttctacttgctttagtttctttatatagccttttgtatttgtgttt  5726800                            <---------TOE2(3)                        <----------DOF2              <---------ANAC58                            <---------AHL20(2)              <---------ANAC58                          <----------DOF2              <---------ANAC46                 <------------CBF              <---------ANAC55(2)             --------->ATHB51         <---------ANAC46              --------->ANAC55(2)             --------->ATHB12         <---------ANAC58        <---------YAB1 <---------AtLEC2       -------->ATHB1           <---------ANAC58 <---------AHL20(2) --------GT1  <---------ANAC55(1)            <---------YAB1          <---------ANAC46  --------->AHL20(2)   tactcttactgtgattacgtgttttgcattaatgctactattagcctattattgacttctttatttgcattttgtgtgttctctgaaaattttatctaca  5726900               <---------YAB1               <---------ANAC46               <---------ANAC55(1)             <---------ICU4            --------->ICU4       --------->ANAC55(2)       --------->ANAC46       <---------ANAC55(2)                   --------->ANAC46                           ------>MYB46(1)       --------->ANAC58           ---------->DOF2                                       ------>MYB83       --------->ANAC55(1)      <---------AHL20(2)                                    --------->AtMYB61       --------->ANAC58        <---------AHL20(2)                                     <---------MYB59    <---------REM1(2)          --------->AHL20(2)      ----------->GT1       <---------YAB1         -   aacttgtacacgtaattatgtgtgttttgctaatttaaaagttatctacgtagcaaatagtaaaattctcaacaaattgattatacgaccaaactataca  5727000                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  <--                   <---------MYB52(2)              <---------At4g35610                            ---                  <---------At4g35610         ----------->HVH21             <---------YAB1   --------         <---------YAB1           --------->YAB1   --------->At4g35610--------->ARR11(3)     <-------     <----------DOF2    --------->TOE2(3)     <---------YAB1        <---------TOE2(3)        <------- ------>TEIL      --------->At4g35610---------->DOF2    --------->TOE2(3) ----------->GT1    --------   tgaatttctttatttttggcaacttacattattcaataacaaagtagtatgacagataacttaatttacaaaggtattgtgatttagtgattcaataaaa  5727100                                                 <--------ATHB1   <----------DOF2                               --------->AHL20(2) ---------ARR11(3)                               <---------AHL20(2) -------->ARR11(3)                               --------->ATHB51 --------CCA1(2)                      <-----------ARR10 ------>AHL20(1)                     ------>MYB46(1)                         --------->AHL20(2) -------AHL20(1)                     ------>MYB83<---------ICU4              <---------AHL20(2) -------ARR11(3)                   <---------MYB46(2)                    ----------->GT1 ------>ARR11(3)                   <---------MYB59                       <---------YAB1 ->AHL20(2)                       <---------ANAC55(2)   <---------ARR14(2)----------->GT1 --AHL20(2)                       --------->ANAC55(2)   --------->ARR14(2)--------->YAB1       <----- --AHL20(1)                      -------->P     <---------ATHB51     --------->AHL20(2)  <-------TEIL ->AHL20(1)                 ------>ZmHOX2a(1)   <---------ATHB12  ----------->GT1<---------AHL20(2)   tatatctttggttttggtcactagcgactcctacttacctaatcttctcaataatttggatttggatgtgataaaatgataaatttatgagttcatggtt  5727200  Previous    Next  AGI:  At5g17380.1    Description:  pyruvate decarboxylase family protein. similar to CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1) [Arabidopsis thaliana] (TAIR:AT3G48560.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68769.1); similar to hypothetical protein OsI_002072 [Oryza sativa (indica cultivar-group)] (GB:EAY74225.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (InterPro:IPR012001); contains InterPro domain Thiamine pyrophosphate enzyme, C-terminal TPP-binding; (InterPro:IPR011766); contains InterPro domain Thiamine pyrophosphate enzyme, central r Range:  from: 5724761    to: 5726748    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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