Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                            ---------                                                                                          <---------YAB1                                                                                          <------ZmHOX2a(2)                                     <----------DOF2                                     <---------ARR11(3)                                     <---------DAG2        --------->TOE2(3)             --------->ARR11(3)           <----------DOF2 ---------->DOF2                <---------ICU4                --------->YAB1          <---------ANAC58--------->AHL20(2)              --------->YAB1             ---------->DOF2          <---------ANAC58<---------AHL20(2)              --------->ATHB12        --------->ANAC58 ---------GT1<---------AtMYB61 --------->ARR11(3)        <---------ATHB12         --------->ANAC46 -----AHL20(2)         --------->WOX13(1)    <-------TEIL--------->ICU4           --------->ANAC58   tatccatccatggctttggttctgtcaattaaagaactacttttagtttcattactcaaatcattaacacagtcatacacttacacacaaagatcattca  5673100                                                                  --------->ANAC58      --------->LBD16                                             --------->ANAC55(2)    --------->TOE1(2)                                             --------->ANAC58    <---------LBD16                                               <---------ANAC55(2)   --------->At4g35610                                            --------->ANAC46   --------->ZAT2                       <---------YAB1     ---------->DOF2                       ----   ----------->RAV1(2)    ----------->RAV1(1)            --------->ANAC58                      <----- --->YAB1    --------->DAG2          --------->GLK1(2)   --------->ANAC58                      ------ >WOX13(1)  ---------->DOF2         <---------GLK1(2)  --------->MYB52(1)          ----------->GT1---   aaatcacctgggaaaaaagcactcggggcaacaaaatcgattctgaataacaaaacaaaacgaaagtcacgaaatgcctatggaattgtgaaatggaagc  5673200                                                                    --------->bZIP60(1)                                                                    <---------bZIP60(1)                                                                  <---------ICU4                         --------->ATHB12                         --------->YAB1               ------                         <---------ICU4                          --------->ICU4           <------MYB83                        <---------MYB52(1)                       <---------YAB1           <------MYB46(1) ------->GT1 >>>>>>>>>MYB2                                     <---------ICU4            --------->MYB59 ----At4g35610     --------->TOE2(3)       --------->TOE2(2)  --------->ICU4<------ZmHOX2a(2)  ====== --->At4g35610   ------>MYB46(1)          ----------->RAV1(2) <---------ATHB51           <---------AtMYB61 ------>At5g28300------>MYB83    --------->ICU4    ------->TEIL--------->YAB1   --------->MYB46(3)   tgtaaaattgaagaaaaccaatctcagttattgcaatacttgaaacctgagtgcatctaagacaattatgatgacacgatcaacaactggtttggtccaa  5673300                                                            --------->ANAC58             --------->ANAC58            <---------YAB1                        --------->ALFIN1                       --------->ANAC58    --------->At4g35610                         <---------ANAC58                    <------NtERF2    ----------->RAV1(2)                 --------->ATHB12--------->ANAC58          <---------DEAR3(1)    <---------At4g35610              --------->YAB1--------->REM1(2)            --------->TOE1(2)  <---------RAP2.6(2)        --------->ZAT2     <---------ANAC46                <-----------HVH21 --------->RAP2.6(3)         <---------ZAT2     <---------ANAC58               --------->O2        == ----->RAV1(1)        <---------WRKY18(1) <---------WOX13(1)--------->ANAC58   <---------O2   <------ ===============RAV <---------WOX13(1) <---------YAB1   --------->ANAC58      <---------HSFC1(2)   --   catttcggctgagtctgattagattgacccgagcttgaatcgtgattggagcgtggagaagcaaggcaaggagagagagaaacgtcggagcaagtactgt  5673400                                          <------ZmHOX2a(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                     --------->REM1(2)                                  <---------ANAC46                                 <-------MYC3                                 ------->MYC3                                --------->O2                           <---------GLK1(1)                                --------->ANAC58         <---------ANAC46                                --------->ANAC46         <---------ANAC58          <-----------HVH21                                --------->ANAC58         <---------ANAC58       <---------At4g35610                              <---------ALFIN1           ----------->GT1        --------->At4g35610                <---------ANAC58<---------O2  <---------ICU4           --------->GLK1(1) =========================================bZIP_DOF      <-----------------------TaNAC69(2) ---ANAC46      <---------ANAC46<---------TGA1a       <---------DEAR3(1)     ---------->DOF2 -------->DOF2  <---------ANAC58--------->TGA1a      --------->ATERF1(1)    ------>ZmHOX2a(1)   ggaaaggaagctctgttcgcgtgagaagaaacccacgcgtgaagatcaaaatggcgatggcgtgaatcaagagaaatcctaaagctgtcaacttcttgtt  5673500                                                                                  ------>NtERF2                                                                                  --------->RAP2.6(2)                                                                                <---------LBD16                                                                           ----------->HVH21                                                                   <---------ANAC58                                                                   <---------ANAC46--------->At5g28300                                         <---------GLK1(1)         <---------ANAC58<------NtERF2                   --------->LBD16 <---------MYB52(1)           ----------->HVH21 --------->LBD16                 <---------LBD16<---------LBD16         <---------GLK1(1)<---------At4g35610    --------->CCA1(2)         <-----------GT1          --------->ARR11(3)--------->At4g35610   <-----   --------->ARR14(2)      <---------GLK1(2)   <---------MYB52(1)  <---------bZIP60(2)    --------->AHL20(2)   <---------ARR14(2) <------ZmHOX2a(2)  --------->GLK1(1)     <-----------HVH21--------->At4g35610   cttcagatatgtctccatctccggatcaaaattctccggtcgtatttccgataagtagatttcgccgtgacgggctactgaccgcggcaaaataaactat  5673600                                            <------------CBF                                           --------->ATHB12                                      <---                                           <---------ICU4                                       -----                                    <-----------GT1                         <---------ANAC58    <----            <---------ANAC46--------->O2   --------->YAB1                   <---------ANAC46   ------            <---------O2    <---------bZIP60(1)                             <---------ANAC58  <------            <---------ANAC55(2)<---------ANAC46                         <----------DOF2       <------            --------->O2    <---------O2  <---------YAB1           <---------At4g35610        <------ -------CBF <---------TGA1a --------->bZIP60(1)                   <-----------RAV1(1)  ------------>CBF   tgaaggtgatgaagacgtgaatggaaaacgacgtcgtataacttatcattgtaagtgtaatcgagtttttgctgctttgcgttttgtttagcaatggcgc  5673700 -------DOF2                                                      --------->YAB1                 ---- ------>GT1                                                    --------->YAB1               <-------- --NtERF2                                              <---------MYB46(3)                  <---------MYB46(3) >NtERF2                   <-------TEIL                <---------DEAR3(1)                <---------MYB52(1) ---ANAC46       --------->ANAC55(2)       <-----------GT1 <-------TEIL                 --------->LBD16 ---ANAC58      <---------TOE2(3)    ----------->GT1  <---------ANAC46          <---------At4g35610 ---ANAC58      --------->MYB59  <-----------GT1<---------MYB52(1)--------->AHL20(2)  <---------LBD16   gttatattttcagacatttaggtaatcgattcgttttacaggttataaccggtatggagggtgcataataaaaatttagtttagctactccggttattga  5673800                                                         --------->MYB52(1)      <---------YAB1                                   <---------WOX13(1)   <---------AHL20(2)                               <---------AHL20(2)   <---------ATHB51                           --------->YAB1                          <---------At4g35610 ------->GT1        <-----------GT1        <----------DOF2                  --------->GLK1(2) ----CBF         <---------ICU4            ------>ZmHOX2a(1)           <-----------GT1--------->STY1(2)   agtaaattattctggcgaatttttactacaaaataagcttcagtcctttgatatttgattaactgagtaagttatacgattccgatttagctagcattca  5673900                                             <---------ICU4                                             --------->ATHB12                         <---------CCA1(2)  --------->ICU4                     --------->CCA1(2)                  <---------At5g28300     --------->YAB1       <---------YAB1--------->YAB1   <------                 <-----------GT1   --------->CCA1(2)   <---------At4g35610  <---------YAB1    <------            --------->YAB1       --------->YAB1    <-----------TGA1--------->YAB1             <------         --------->WOX13(1)     <---------YAB1     <-----------HVH21 <---------CCA1(2)  <---------TOE2(3)   acagtataagttaatcaaattacagtcgtctcttatgatatgaagaatgatttcgtcatccgattactatcatctcttatgatatgaacaaaggtttcgt  5674000  Previous    Next  AGI:  At5g17250.1    Description:  phosphatidylinositolglycan class O (PIG-O) family protein. similar to transferase [Arabidopsis thaliana] (TAIR:AT2G22530.1); similar to Os10g0170300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064233.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45480.1); contains domain PTHR23071 (PTHR23071); contains domain SSF53649 (SSF53649) Range:  from: 5668902    to: 5673518    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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