Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->AHL20(2)                               <---------AHL20(2)                             --------->TOE2(3) <---------AHL20(2)      --------->AHL20(2)         ---                 <-------TEIL<---------------AGL15                     <---------AHL20(2)        <---          --------->YAB1     --------------->AGL15              ----------->GT1                  <---  <---------AHL20(2)         <----------DOF2----------->GT1   ---------->DOF2          --------->AHL20(2) --------->AHL20(2)         <-----------------AGL3       --------->ICU4<---------ATHB51<---------AHL20(2)   gaattttatcaaatataagtccatctaatttctttaattagataaatagtaaatttgaaatgaataaagataaataattcatggacgaataaaatacaaa  5656000                                                                                    ----------->GT1         <---------GLK1(2)                                                    --------->ANAC58 ------>ATHB12           <----------DOF2   --------->YAB1                     --------->ANAC58 ------ATHB12      <---------YAB1     --------->WRKY18(1)                 --------->YAB1 ------YAB1  <---------YAB1    <---------AHL20(2) <---------YAB1       --------->YAB1   --------->AHL20(2)   tgatagaacaaaattctcattttcattctttatatttttggtcaagaatattgtcattctattcatttttgaattatagtaagaaacagataaaatgtgt  5656100                                  --------->ARR11(3)                                        ---------                                  <---------ARR11(3)                               --------->AHL20(2)               ------->TEIL    --------->AHL20(2)               ----------->GT1  --------->TOE2(3)            <---------YAB1     <---------AHL20(2)         <---------YAB1         <----------DOF2          --------->YAB1  --------->AHL20(2)      --------->ANAC58          <------ZmHOX2a(1)<-------         --------->ICU4   --------->AHL20(1)      --------->ANAC58 <---------AHL20(2)       <--------     <---------YAB1       <---------AHL20(2)--------->MYB46(3) <---------AHL20(2)--------->TOE1(3)   tcgtcttataaatgatgaaactcttaaataaaataaaatctatgtaaccaataagctattcttatttagttaaatggaggaaactttaaatagattaatt  5656200                                                 ------>ZmHOX2a(2)                                                --------->At4g35610                                                <------ZmHOX2a(2)                                               <---------ARR14(2)                      --------->AtMYB61                                               --------->ARR14(2)                   ------>MYB46(1)                                               <---------AGP1                       ------>MYB83       <---------ICU4 --------->TOE2(3)       <---------CCA1(2)            --------->YAB1       --------->AHL20(2)                 <-----------HVH21          <---------------AGL15      --------->AHL20(2)                  <---------MYB52(1)         --------------->AGL15      <---------AHL20(2)               --------->SPL7               ----------------->AGL2     ------ >AHL20(2)       <---------ANAC58    <-----------HVH21              ----------------->AGL3   -------- --AHL20(2)      <---------ANAC58--------->MYB52(1)                >>>>>>>>>>MYB80<---------MYB59 -AHL20(2)   <----------DOF2    --------->MYB52(1)             <---------ATHB12   --------->AtMYB61   ttctctaaataatttctttgcatacctcagtagcaaaccggtccggtcggatctgaattgaacaaatcaaaccaaaatcagaaaccaaaccaaaacagag  5656300                                         ===================HOX2a_HOX2a                                         ------>ZmHOX2a(2)                                         ======================HOX2a_HOX2a                                       <---------ARR14(2)                                       --------->ARR11(3)                                       <---------ARR11(3)                                       <---------AGP1                                       --------->ARR14(2)                                      <---------CCA1(2)                                    --------->ALFIN1                                   <-------MYC3                                  <---------ANAC46                                             <-----                     --------------->AtSPL3                                                  <-------                     <---------------AtSPL8                                                 <--------                     <---------------AtSPL3                                                <---------ZAT14       --------->AHL20(1)       <---------ANAC46                                           --------->ZAT18       --------->AHL20(2)       <---------ANAC58                                     *TSS  --------->ZAT14       <---------AHL20(2)       <---------ANAC58                   <---------ZAT18 --------->DAG2       <---------AHL20(1)       --------->ANAC55(2)           <---------ZAT14     ---------->DOF2  <-  <-------TEIL       --------------->AtSPL8             <------ZmHOX2a(1)    ------>NtERF2--------->ALFIN1 ----->GT1          ---------->DOF2------->MYC3  --------->ICU4  <---------------AtSPL8 <---------ANAC58 --->GT1 <------------CBF       <---------ANAC55(2)  <------ZmHOX2a(1) <----------DOF2  <---------ANAC58   aaaatacattttattgaaacttgaaagtaccattacgcgtggatctatgtaataaggaggagagagtagagtactttgccgactaaaagtgagtgcggtg  5656400                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  <--                                         >>>>>>>>>TBF1                                     <---------LBD16                                   ------>MYB83                                        <---------ARR11(3)                                   ------>MYB46(1)                                    <---------GLK1(2)                                  --------->MYB52(1)                                 <------NtERF2---                                 --------->TOE2(2)      ----------->GT1             --------->ANAC58 ----ANAC46     ------>MYB83<---------ANAC58    ----------->GT1---------->DOF2      --------->ANAC58 --ANAC46       ------>MYB46(1) --------->MYB46(3)     --------->DAG2           --------->ANAC58  --- -DEAR3(1) <-----------GT1  <---------ANAC58  --------->At4g35610               --------->ANAC58  --- --------AHL20(2) <----------DOF2--------->TOE1(2)    ---------->DOF2         ---------->DOF2    <---   tttaatgggtttgtcaccaactttccattttcttaccaacgaagaagaagcagaaaaaaagtaaacaaagactaaaaaaaaaaagccagcatcttcggag  5656500  <---------MYB46(3) -----MYB83                                                                                 <-------- --------MYB46(3)                                                                           --------- -----MYB46(1)                                <---------ANAC46                  <---------At5g28300 -------MYB46(3)                            <---------ANAC46                  <---------MYB52(1) ------>MYB111(1)                          <---------AtMYB61                 <-----------HVH21 -------AtMYB61                          --------->ALFIN1                   <---------MYB46(3) ------>ALFIN1                         <---------bZIP60(2)                <---------At4g35610 ------>MYB111(2)                      <---------ANAC46                   --------->At4g35610     <-- ------>MYB55(2)                <---------GLK1(2) <---------AHL20(2) --------->YAB1        <---------DEAR3(1) -----P                  <------ZmHOX2a(1) --------->ALFIN1         <---------YAB1       <-----------HVH21   ttggtgggagagagacagagatggagaggagaaagattgtgatgtgtggtgttttatttcttcttggtttattatcagctgttactgccttcgtcgctga  5656600                                                                                         <---------At5g28300                                      <---------GLK1(1)                                 <-----------GT1                                   <---------TOE2(3)                         ------>ZmHOX2a(2)        <---------ATHB12     <----------DOF2                                <---------YAB1   --------->HSFB2a(2)    <---------ALFIN1                                 <---------ARR11(3) -At4g35610              <---------At4g35610                 ---------->ID1--------->ARR11(3) ------- >At4g35610<---------TOE2(3) <---------DAG2 <---------MYB52(1)         --------->YAB1  <---------YAB1 -------At4g35610  <<<<<<<<<TBF1   <---------TOE1(3)         <---------TOE2(3)<----------DOF2 -------   agctactcgaatcaaggtttcttcttcagcactttttagggtttctgttttttagtgaaatttgtggtttttctcatgatctttgggttattacagccac  5656700                                                                                        <---------ANAC58     <-------GAMYB                                                            <---------ANAC46    <---------MYB46(3)   <---------ARR11(3)      <----------DOF2              <---------ANAC58     --    --------->MYB52(2)   --------->ARR11(3)      --------------------->WRI1   <---------ANAC58 ------ -->RAP2.6(2)           <------ZmHOX2a(1)  <---------ANAC58              --------->ATHB12      <----- ---->RAV1(1)       ---------->DOF2        <---------ANAC58             <-------TEIL    <---------ANAC58   aatggtttgttgaaactctatctaaaggatttttgggttttgtctgcgtttctttttatgtgtcgattttgaaattcattgcctgaaaatgcgtttgaga  5656800                                 <--------ATHB1                                 --------->ATHB51                                 --------->ATHB12                                 <---------ICU4     <------MYB46(1)                                 -------->HAHB4     --------->MYB52(2)                                <---------YAB1      --------->MYB55(2)                                --------->ICU4      <------MYB83                                <---------ATHB51    <---------MYB46(3)         <---------ATHB12     --------->YAB1       <---------TOE2(2)                             <--- -------->DOF2         <-------GAMYB   <---------ANAC46  <---------------------WRI1          <------- --->At4g35610         --------->At4g35610         <---------TOE1(2)                --------->PCF5<-- ----At4g35610         <---------At4g35610        <---------MYB52(1)  <---------ATHB12       <-------   tgaaagcttcaatctttgagatgggagttgaataataattggtgggaaactcgttggtttgggaatttttcaatgaaacagtaatggtccccattcacgg  5656900  Previous    Next  AGI:  At5g17210.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13380.1); similar to Os06g0114700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056606.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62222.1); contains InterPro domain Protein of unknown function DUF1218 (InterPro:IPR009606) Range:  from: 5656385    to: 5658149    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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