Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             ----------->GT1                             ---------->DOF2    <---------ANAC58     ------>ZmHOX2a(2)                      --------->ARR11(3)    <---------ANAC58   <---------ARR14(2)                       <---------GLK1(2)    <---------ANAC46   --------->ARR14(2)                     --------->ICU4 ------YAB1            <---------AGP1--------->TOE1(3)      ---------->DOF2 -->GLK1(2)            --------->ARR11(3)        --------->AtLEC2   <---------YAB1 --GLK1(2)             ------->TEIL  --------->TOE2(3) --------->AHL20(2)----------->GT1      -------   tgaatagcgtcgatgaaattgaatggatctggtaaaaaaccctaaaaatccatacaaaaaaataaagattatgaaaagaaacaattgaaggcaatcttgt  5622100                                                      <---------LBD16                                                  --------->O2                                                <---------ALFIN1                                               ------>ZmHOX2a(1)                                  ---                                            <------ZmHOX2a(2)                                     ---                                           <---------ARR14(2)                                     <--                                           <---------GLK1(2)                                  -------                                           --------->ARR14(2)                  --------->DOF5.7(2)<--            <---------GLK1(2)              <---------ARR11(3)                  <---------MYB52(1)----          --------->ANAC58               ----------->ARR10            --------->ICU4          -------     --------->ZAT18                  ----------->RAV1(2)            --------->ANAC58      --------->ZAT18     <---------ZAT18              ---------->DOF2 <---------O2       --------->ANAC58     ------>NtERF2 ---->GT1 --------->ANAC58 --------->ARR14(2)------>ZmHOX2a(2)   --------->AtLEC2<---------DOF5.7(2)   taattagtgagcaagaaactccattaccctattctccaaagcctggatcctcacttcgcggtattccatgtaagcattgtcgttagcgaagcgggcacga  5622200                                                                                                    -                                                                                                    -                                                                                                 ----                                                                                                 ----                                                           <---------ARR14(2)                   <----                                                       <-----------------AGL1                   <----                <---------ARR14(2)                     <---------LBD16                         <-----       ------>ZmHOX2a(2)                               ------>ZmHOX2a(2)                       ------     <---------ARR14(2)                                ----------------->AGL1                  ------     --------->ARR14(2)                          <---------LBD16 ====================================    <------ZmHOX2a(1)                   <---------ALFIN1   --------->ARR14(2)                  ------ <-----------RAV1(2)                    --------->ANAC46 --------->LBD16                       ------ ------>At4g35610                    <---------ZAT18   <-----------------AG                    ------ ------>ZAT2    --------->ARR14(2)   --------->ETT(2) <------ZmHOX2a(2)                        ------ -------At4g35610                    <---------ETT(2)<---------ARR14(2)                        ------ -->ANAC58<---------GLK1(2)     --------->ZAT2 <---------ALFIN1  <--------P                   ------- -------ZAT2<-------TEIL        --------->At4g35610  --------->ARR14(2)         ===================== --->TEIL --------->ARR14(2)    <---------At4g35610--------->LBD16              <----------DOF2====== -->ANAC58<---------ARR14(2) ---------->DOF2 <---------ALFIN1   <---------MYB52(1)-------------------   agctcaggatcggattcgtattcgagcccatcaaagctgtccacatcccactccggatccggtttcggtaagtcttctatcactttgtaatccccatacg  5622300 -------->ANAC58 -------->ANAC58 ----->TGA2(2) ------->HVH21 -------TGA1 -------HVH21 ----ANAC55(2)                                                                --------->LBD16 --->ANAC55(2)                                                               <---------LBD16 --->ANAC46                                                                  <---------HSFB2a(2) ====MYC_MYB                                                                <---------LBD16 --->ANAC58                                                              <---------ARR14(2) --->ANAC58          <----------DOF2                          ------>ZmHOX2a(1) --->ANAC55(1)------>MYB83                           <---------MYB52(1)  --------->ARR14(2) --->TGA1a  <---------MYB46(2)                 <---------GLK1(1)      ----------------->AGL1 --->O2     <---------MYB111(1)               --------->ARR11(3)      =============================== -->SPL7    <---------MYB111(2)               <---------ARR11(3)      ----------------->AG          < ====bZIP_DOF ------>MYB46(1)                 <---------ARR14(2)     --------->ANAC46     ----------- ===============================bZIP_DOF      --------->ARR14(2)   <---------ALFIN1     ---------->DOF2 ---->TaNAC69(2) <---------ZAT14              <-----------ARR10--------->TOE1(1)     --------->TOE2(3)   tcacgcttccatcacctacttcactttcgctctcgccttcggtttcagtatctccgtcgtcttcctcgtccaccctattcggggaaaacttaaagttaaa  5622400                   ---------->DOF2            --------->ANAC58            --------->ANAC58                               <---------------AGL15            --------->ANAC46                      --------->O2           --------->SPL7                         <---------O2         <---------SPL7    --------->ARR14(2)  ----------->HVH21       <---------------AtSPL3                 <-----------HVH21       --------------->AtSPL3                 --------->LBD16                      <------NtERF2    ------>ZmHOX2a(1)      <---------ARR14(2)--------->ANAC55(2)               *TSS<-----------------   --------->TOE2(3)      <---------MYB52(1) --------->ANAC46<---------YAB1    <-----------HVH21 ---------->ID1   <---------ATHB12 <---------ANAC58        --------------->AGL15 <---------DEAR3(1) ===========================================================================MADS_MADS    <---------MYB52(2) -----------GT1   --------->AHL20(2)      <-----------GT1 <-----------------AGL3<------NtERF2-------- >GT1  --------------->AtSPL8      <---------ANAC58      <---------At4g35610  <---------DEAR3(1)   tttttccttatcgtacgccaataaatccgtttctgaagcttgtttttccgtcacatcggagctactattggtagtcatcgtcgtcggagaaacgaacaaa  5622500                                                                   <---------AtLEC2                                                                   <---------ANAC58                                                            <---------ANAC46                                                            <---------ANAC58                                                ------>MYB83<---------ANAC58                                                ------>MYB46(1)    <---------ANAC46                                       <---------ANAC55(2)<---------YAB1                                       <---------ANAC46 -------->HAHB4                                     --------->MYB52(1) --------->YAB1                                    <---------MYB52(1) --------->ICU4                             ---                                  --------->ANAC55(2)  <---------ATHB12           --------->GLK1(1)                               --------->ARR14(2)   <---------AHL20(2)            --------->CCA1(2)                               <---------ARR14(2)  --------->AHL20(2)             <---------GLK1(1)                 --------->GLK1(1)<---------ANAC55(2) <---------TOE2(3)          <---------ARR14(2)                <---------ARR14(2)--------->ANAC58 --------->AHL20(1)            --------->ARR14(2)   <---------GLK1(2)         --------->ANAC46--------->ANAC58      <---------ANAC58        <--------- ----WRI1       --------->ARR14(2)--------->ANAC58 <---------AHL20(2)            --------->ARR11(1) ->MYB46(3)     <---------GLK1(1)<-------TEIL--------->ANAC58 <---------MYB46(3) --------->ARR11(3)   ccctagaatttgatttgggattcccaactagacgatacgttacggacaccaaatttaatgatgcttgttgcatgtaatttacagatatgccatttacttc  5622600                      --------->CCA1(2)                     --------->ARR11(3)                  --------->AHL20(2)                  <---------AHL20(2)            <---------ANAC46            <---------ANAC58            --------->ANAC58            --------->ANAC58            ----------->GT1            --------->TGA2(1)            <---------bZIP60(1)            --------->ANAC55(2)            --------->bZIP60(1)            <---------ANAC58            <---------TGA2(1)                                                                      --            <---------ANAC55(2)                                                                <-----          <---------TGA2(2)                        <---------------AGL15                      <------         ----------->HVH21            <---------AHL20(2)                                <---------MYB52(1)         ----------->TGA1     --------->ALFIN1     --------------->AGL15           ------>NtERF2 <---       <---------O2  <---------AHL20(2)           ----------------->AGL2          --------->ANAC46 -- --->ZmHOX2a(1)   --------->YAB1     --------->AHL20(2)        --------->YAB1    <---------LBD16 <--- --GT1 --------->O2  <---------AHL20(1)           ----------------->AGL1--------->REM1(1) --------->AHL20(2)   ctccatttctcgtgacgtaataatatatgggcctggggattaaatggattaagcccaatagagaaacataaactacaactattcccgcccgtttatttac  5622700     <---------ATHB12   --------->MYB52(1) --------->MYB46(3) ---->MYB46(1) ----At5g28300 -----GT1                                                                         --------->ANAC58 ------MYB59                                                                      --------->ANAC58 ---->MYB83   <---------TOE2(3)                                                   --------->ZAT6 ------MYB46(2)    <---------YAB1  <-----------GT1                              <-----------GT1   cgaaccaatggattttaagttttgatggaagcattttttacttacaaagactaattttgaaatttgaactattacttctatataacgctatctaacaaaa  5622800                                                              <-------TEIL                                                             --------->GLK1(2)                                                             --------->CCA1(2)                                                      <---------At4g35610                          --                                        <---------GLK1(2) ----------->ARR10          <---------HSFB2a(2)                            <---------AtLEC2          --------->At4g35610            --------->HSFB2a(2)  ---------->DOF2          <---------MYB46(3)  <---------ATHB12                     --------->ZAT14--   ccatcaaagtatgtgtaacaataaatctgtggatggaagatagaatcccatcactgagatgagattcgaagaacgatatatcgcagtccagaagatgaat  5622900                                                             <---------YAB1                                                   <---------TOE2(3)                       <---------AHL20(2)                                                   <---------HSFB2a(2)                     <---------YAB1  ---------->DOF2                                  <---------YAB1         --------->AHL20(2) ------->TOE2(3)           <---------At4g35610  <---------YAB1            <---------AHL20(2) ------->TOE1(3)   <---------YAB1          --------->CCA1(2) --------->ICU4<---------AHL20(2)   -----   acctcaaagaacagaaatttgatgatggaagatgatgaacaagagatttgattatggaagttgatgatgaagagaataaaatttgtgtttttttttatta  5623000  Previous    Next  AGI:  At5g17090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G17120.1); contains InterPro domain Cystatin-related, plant (InterPro:IPR006525) Range:  from: 5621252    to: 5622479    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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