Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ----------->GT1     ---------->DOF2  <---------HSFB2a(2)  --------->HSFB2a(2) --------AHL20(2)                                             --------->ANAC58 ------>AHL20(2)                                              --------->ANAC58              <-------- --->AHL20(2)                                            <---------GLK1(1)     --------->ARR14(3) ----AHL20(1)                                            --------->GLK1(1)     --------->ARR14(2) ----AHL20(2)                        <-------GAMYB      <---------ARR11(3)     <---------ARR11(3) -->AHL20(2)                        ----------->GT1 --------->YAB1             --------->ARR11(3) >TOE2(3)                           <---------MYB46(3) <------ZmHOX2a(1)       <---------ARR14(3) >TOE1(3)              <---------AHL20(2)           <---------LBD16            <---------GLK1(2)   atttatagaaagtaagaaaaactaattaatggtatatgtggttaaatttgtttatcaggatatcaagaaactagatttcaagattttctaattccgctta  5594300                                                                                   <---------MYB52(1)                                                                                  <----------DOF2                                                                                  <---------DAG2  <--                     <-------TEIL                                                --------->TOE2(3)---                  <------ZmHOX2a(1)     <----------DOF2                     <----------DOF2      ----          ---------->DOF2 --------->AHL20(2)                                <---------DAG2       <--- -At4g35610   ---------->DOF2    <-----------GT1      ---------->DOF2     ------->TEIL   ------->TEIL   gttattaagaagaaaagaaaggatgcattaaaaaaaaaccttctttctaaacaaaaaaaagaagaagtagaagatgaacttttcctttatgtatgtaaat  5594400                                                                              <---------AHL20(1)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                --------->ANAC58            <---------YAB1                                                --------->ANAC58          <---------ICU4                                             <---------ATHB12             -------->ATHB1 -------AHL20(2)                  ------>ZmHOX2a(1)                      <---------ATHB51 ------>AHL20(2)                 <---------ANAC46                        <---------AHL20(2) ----->AHL20(2)                  <---------ANAC58                        --------->AHL20(2) ------AHL20(2)                  <---------ANAC58                        --------->ICU4   taaattctttgaaaactattttgttttgttaagttccttatgtccccatcaagaaatagcagaaaaactcaacaaattattaaatttcaattctacaaat  5594500                                                                             --------->TOE2(3)                                                                             --------->TOE1(3)                                                                          <-----------GT1                                                                     <---------AHL20(2)        ------                                                                 --------->AHL20(2)           <------ZmHOX2a(1)                                                                 --------->AHL20(1)         <--------                                                                 <---------AHL20(1)     --------->YAB1                                                                 <---------AHL20(2)   --------->AHL20(2)                                                             <---------AHL20(2)    --------->AHL20(2)            --------->AHL20(2)              ---------->DOF2  --------->AHL20(2)    <---------AHL20(2)            --------->YAB1          <---------ZAT14          --------->AHL20(1)    --------->AHL20(1)  <------NtERF2                     --------->ZAT14         --------->AHL20(2)     <---------AHL20(1)   aggcctcagaacaattaaaaaacagcataaaaacttagtaaactaataaagtttcaaatcaaattaattaattaagttaccttaataaaataataaggaa  5594600                                                    ------------>CBF                                                  <---------ANAC46                                              ----------->RAV1(2)                                              <---------At4g35610                                              --------->At4g35610                                            --------->SPL7      ----------->GT1                     <-----------HVH21         <----------DOF2 <------ZmHOX2a(1)                        <---------ATERF1(1) <---------At4g35610 ---->DOF2                               --------->ANAC46--------->YAB1                     <-------- -TOE2(3)            ---------->DOF2     --------->DEAR3(1)   --------->At4g35610         -----------   agaggaagatgtaaaacaaatttcaaagtcactcgttttctccccgtcccctgcgtcaattttaagctgtcttttgagaactctctctctctatatatat  5594700                                                                          <----------DOF2                                                 <----------DOF2         <---------DAG2                                         ------>MYB83               <-----------GT1                  <----------DOF2        ------>MYB46(1)           <-----------GT1    <-----------TBP                    *TSS ------>ZmHOX2a(1) <---------GLK1(2)                     < -AHL20(2)--------->ANAC46            --------->MYB46(3)      --------->ARR11(3)                   -- >TBP ----------->TBP               <-----------GT1           <---------ARR11(3)                   --   gtgtgtatatataagcctctcttttctcgctctgtgttaaaccatcctctcctttctctctctagatttttatcccctttccctctctctctctctctct  5594800                                                                    --------->GLK1(2)                                                                   <---------ARR11(3)                                                                   <---------GLK1(2)                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                                  <---------HSFB2a(1)                                                                  --------->HSFB2a(1)                                                                  <---------HSFC1(2)                                                                 <---------KAN4(2)                                                                 ----------->ARR10          ---------->ID1                                     --------->HSFB2a(2)          <---------CCA1(2)                                  <---------HSFB2a(2)        <---------ANAC58         <---------ZAT6              --------->LBD16        <---------ANAC58 --------->At5g28300                <---------LBD16 ---------TOE1(2)       <---------ZAT6            --------->ATHB12--------->HSFC1(2) ------->STY1(1)    <---------ZAT14     ------->GAMYB       --------->HSFB2a(2)  -------------------- ---->ZmHOX2a(1)    --------->ZAT14  --------->MYB52(1)    <---------LBD16   <---------ZAT18        -   cctagggttttcgtctctctcgttcactgttaatagtcttaacggagaggtttgattagcctccgggaagattctactgcgaactttggacacatctctc  5594900         --------->At4g35610         <---------ZAT2         --------->ZAT2         =============================================MYC_MYB         <------NtERF2         <-------GAMYB         <---------At4g35610         --------->ATERF1(1)        <---------ERF1                             --------->ZAT14        <---------RAP2.3(1)                     <---------DEAR3(2)        <---------MYB46(3)                     <---------DEAR3(1)                          ------>ZmHOX2a(2)        ------>NtERF2                         <---------------------WRI1                  <------ZmHOX2a(2)       <---------ATERF1(2)                  <---------bZIP60(1)                          <---------ARR14(2)       <---------DEAR3(1)                   --------->bZIP60(1)                          --------->ARR14(2)       <---------RRTF1(3)                   <---------bZIP60(2)                          <---------ARR11(1)       --------->ATERF1(2)                  <---------O2                                 <---------ARR11(3)       <---------RAP2.3(2)                  <---------TGA1a                              <-----------ARR10       <---------RAP2.6(2)                  --------->O2                           <-----------GT1       <---------ANAC58                     --------->TGA1a             ------>NtERF2<---------LBD16       <---------RAP2.3(3)                  =============================================bZIP_DOF   -       <---------DREB2C(2)               ----------->HVH21            <---------ANAC58  <---------CCA1(2)       <---------ANAC46            --------->At4g35610                <---------ANAC46  <---------ARR14(1)       <---------ANAC58            <---------ZAT2  <---------ZAT18    <---------ANAC58 --------->LBD16      --------->RAP2.6(3)          <---------At4g35610                <---------RAP2.6(2)<---------AGP1 ->WRI1<---------RRTF1(2)        <-----------RAV1(2)             <-----------RAV1(1)--------->MYB52(1) ----->NtERF2       --------->MYB52(1)  <---------WOX13(1)  ------>NtERF2     <----------DOF2--------   tctgccatggcggctgagaagttaagggacttgagccagccgattgacgtcggtgtgctcgatgccactgttgcggccttctttgttaccggatctaaag  5595000                                                  --------->ATHB12         <---------AHL20(2)                                                  <---------ICU4          <----------DOF2      <----------DOF2                             <--------ATHB1    --------->ARR14(2)    <-------TEIL                                  --------->YAB1    <---------ARR14(2)   --------->ALFIN1        <---------ANAC58      <---------ATHB12 --------->LBD16                  -- -------->ALFIN1           <---------ANAC58      --------->ICU4 <---------LBD16                  <--- -->DOF2        <---------LBD16                  <---------YAB1<---------ANAC46                  ----   aagaggtgcttcaatttctctgggttttgacttgttcaaggggctcgaccaatgattagtctatttcgcgggtctgttttattgtttgagcgtcttcttc  5595100            <------ZmHOX2a(1)                                                              <---------At4g35610        --------->ALFIN1          <-------GAMYB                                            --------->At4g35610      --------->ALFIN1           <---------ANAC46                                          <---------ZAT2    <---------ANAC46             <---------ANAC58                                          --------->ZAT2    <---------ANAC58             <---------ANAC58                                          <------NtERF2    <---------ANAC58        <---------ANAC58                                          <---------HSFB2a(2)   <---------MYB46(3)       <---------ANAC58                                         <---------ANAC58 ------->ATHB12          <------ZmHOX2a(1)     <-----------GT1                       <---------LBD16 ------HSFB2a(2)     --------->ICU4      <---------TOE1(3)      <----------DOF2      <---------ANAC46 ----->HSFB2a(2)  <------ZmHOX2a(1)      <---------TOE2(3) <-------TEIL              <---------ANAC58   tcgattgggtgtgaggagtaggaattaggagcgtttcgttgttagggttttagcactctgatacatctttgtcttaagacgcttgtttcgggcagctcga  5595200  Previous    Next  AGI:  At5g17020.1    Description:  XPO1A (exportin 1A); protein transporter. similar to XPO1B (exportin 1B), protein transporter [Arabidopsis thaliana] (TAIR:AT3G03110.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ73248.1); similar to hypothetical protein OsJ_010402 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26919.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61845.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Exportin-1/Importin-beta-like (InterPro:IPR013598); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Exportin 1, C-termina Range:  from: 5594739    to: 5602958    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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