Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ANAC46        <---------ANAC55(2)                                 --------->ANAC58                  <------ ------->GT1                                            --------->AtLEC2                      ------- -----AGL15                                             --------->ANAC58                --------->YAB1 ---->AGL15                                             --------->ANAC58               <---------YAB1 ----->AG                                         ---------->DOF2                 <---------ICU4 ------AGL3                  ----------->GT1    <------ZmHOX2a(2)         ---------->DOF2     <------ ----->AGL3           --------->ANAC46         <---------ARR11(3)   --------->YAB1--------->YAB1 ----->AGL2           --------->ANAC58         --------->ARR11(3)  <---------ATHB12--------->TOE2(3) ------AGL2           --------->ANAC58  --------->At4g35610 --------->ANAC58     --------->ICU4 <----   agaaaaaatcacataaacaatctcaagacacaagtgaaaacgagctcaagatcaaagcatgcaagccaaatcaaaacaaagtaaacattatcatcagatt  5586700                                                                      <------NtERF2                                                                     --------->LBD16                                                                    <---------LBD16                                                                    <---------ANAC46                        --------->LBD16               --------->ARR11(3)                      <---------LBD16                 --------->AHL20(1)                    --------->ARR14(2)                <---------AHL20(2)  <---------ANAC58                    --------->MYB52(1)                <---------AHL20(1)  <---------ANAC58        ---                    <---------ARR14(2)             --------->AHL20(2)------>NtERF2            -------                 <---------AtLEC2                  --------->YAB1  <---------ANAC46           <------ ---ARR14(2) --------->CCA1(2)          --------->GLK1(2)      <---------ANAC58               ------- -->ARR14(2)--------->ARR14(2)          <-----------ARR10      <---------ANAC58              -------- ---GLK1(2) <---------ARR14(2)         <---------GLK1(2) <---------------AtSPL8              ======== ---TEIL  ----------->ARR10     ---------->DOF2   <---------ATHB12 <---------LBD16         --------->At4g35610   cgaatttcgctggagatttgcataaccggataactaaagaagaatctcgtcaataatatatagtaccttgccgggagcgtaagcttgagcaagagcagca  5586800           <---------GLK1(1)       <-----------RAV1(2)              ------>ZmHOX2a(2)      =============================HOX2a_HOX2a                                                -------      <------ZmHOX2a(2)              <------ZmHOX2a(1)                                     ----------    <------ZmHOX2a(1)       ===================HOX2a_HOX2a                              <---------MYB52(1) ------>ALFIN1          --------->ARR14(2)                                             --------->LBD16 -->At4g35610           --------->GLK1(2)                                             --------->HSFB2a(2) ---At4g35610           <---------ARR14(2)                          --------->ARR14(2)--------->LBD16 -->ZAT2   --------->GLK1(1)------>ZmHOX2a(1)            --------->GLK1(2)            <---------HSFB2a(2) --->RAV1(1)            <---------ARR11(1)              <---------GLK1(2)            <---------LBD16 ==================RAV <---------ARR14(1)   ----------->HVH21       <---------ARR14(2)--------->ANAC46   gtggaaggatcaggtttccccatgcgaatcctcatgtaaggatcgcatgacaagtagagattcttcaccagaactgagttagaccctcccggaagtttaa  5586900                                                                                       <------NtERF2                                                                                      <-----------HVH21                                                                                      <-----------TGA1                                                                                      <---------RAP2.6(3)                                                                                      ------>NtERF2                                                                                     --------->ANAC46                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.3(3)                                                                                    <------NtERF2                                                                                    --------->ATERF1(1)                                                                                    --------->RAP2.3(1)                                                                                   <---------RAP2.3(1)                                                                                   ------>NtERF2          <---------MYB46(3)                                                       <---------ATERF1(1)         <---------AtMYB61                                                     --------->MYB52(2)       --------->MYB55(2)                   --------->MYB46(3)           <---------ANAC58       <---------MYB46(3)          ------>ZmHOX2a(1)                     <---------ANAC46      <---------AtMYB61           --------->TOE2(3)        <-----------GT1<----------DOF2    --------      --------->ALFIN1         --------->GLK1(1)   <---------O2          <---------ANAC58    <-------   <---------DEAR3(1)         <---------GLK1(2)    --------->ANAC55(2)------->PIF5--------->DEAR3(1) -->AHL20(2)                  --------->ARR14(2)   <---------ANAC55(2)<-------PIF5<---------DEAR3(1) ->GT1<---------DEAR3(1)      <---------ARR14(2)   --------->ANAC46  ----------->RAV1(2)    ---------   attcgacggtggtggttttgaaatcgaaatcggattccttagggaaaccactcacgtagtttttcaataccacctgcttgttcgtcgccgtcatcgttaa  5587000                                                                            <------NtERF2                                                                            <---------At4g35610                                                                            <---------ZAT2                                                                            --------->At4g35610                                                <----------DOF2             --------->ATERF1(1)                                         <<<<<<<<<MYB98                    <---------ATERF1(1)                                         <---------MYB52(1)               <---------RAP2.6(2)                                       --------->ANAC55(2)                <---------DEAR3(1)                                       <---------ANAC58                  --------->ATERF1(1)                                 --------->ARR11(3)                      <---------LBD16                                 <---------ARR11(3)                  ----------->HVH21         <-----                                 <---------AHL20(2)               *TSS<------ZmHOX2a(1)      <-------                                 --------->AHL20(1)              <---------HSFB2a(2)        ---------                                 <---------AHL20(1)              --------->HSFB2a(2)   --------->YAB1 <<<<<<<<<TBF1       <---------At4g35610<-------GAMYB        --------->ARR14(2)       <---------YAB1 ->DOF5.7(2)    <---------GLK1(2)--------->AHL20(2)          <---------GLK1(2)   ==================== --MYB52(1)    --------->At4g35610     <---------ANAC55(2)   <---------ARR14(2)  <----------DOF2 ---- >TOE2(3)      <---------At4g35610     <---------ANAC58  <---------LBD16<---------bZIP60(2) <--------   ttcttcttctccgattcagcttctgatgagttcaatatattccgttacttcttttattcttcggattctcgaggacgcggctgcttttattatagtggtg  5587100                                   --------->ANAC58                                   --------->ANAC58                                ----------->HVH21                                --------->TGA2(2)                               <-----------HVH21                              --------->ANAC55(2)                              --------->bZIP60(1)                              <---------ANAC58                              --------->ANAC46                              <---------ANAC55(2)                              <<<<<<<<<<HY5                              <---------O2                              --------->bZIP60(2)                              <---------ANAC58                              <---------TGA1a                              --------->TGA2(1)                              <---------TGA2(1)                              <---------bZIP60(1)                              <---------bZIP60(2)                              --------->O2     --------->TGA1a          --------->TGA1a     --------->O2            ----------->STF1 ----AtMYB61                 <-----------STF1 --MYB46(3)           --------->HSFB2a(2) <---------YAB1 >ALFIN1      <---------ZAT2<---------TGA2(2) ==============bZIP_DOF    ----------->TGA1                                          <----------DOF2 ------------------->TaNAC69(2)<-----------TGA1 <---------YAB1                 <----------DOF2 -AtMYB61     <---------At4g35610--------->MYB52(1)  <---------ICU4      <---------YAB1   gtctctctcgtctcgtagctgtttctagtatgacgtcacggcttatgtttatgactcattacatggttcacatttctgatactttctctttcaagcgttt  5587200                                               <-----------HVH21                                               <-----------TGA1                                              <---------ANAC58              <----------DOF2        <-----------GT1                              <---------ANAC58           <---------ALFIN1    <----------DOF2<---------ANAC58                    <---------ANAC46        <---------ETT(2)<---------YAB1     <----------DOF2                        <---------ANAC58        --------->ETT(2)<------------------------ANAC81                      <----------DOF2  <-----------GT1      <-----------GT1 <-----------GT1      --------->ANAC46<---------DAG2   tttttttctgtcgacactttcaaattttcatttcttttttttctcctttcgtcacattttacacagagtcaaactcaaccttttgcgtttggactgtttt  5587300                                   <---------ARR14(2)                                   --------->ARR14(2)                                <---------TOE2(3)                    >>>>>>>>>>WRKY43                    >>>>>>>>>>WRKY26                   ----------->HVH21                 <---------At4g35610                 --------->ANAC55(2)                <---------TOE2(3) <------ZmHOX2a(1)         <---------MYB52(1)<---------AHL20(2)                                                     ---        --------->LBD16    --------->AHL20(2)                                                    ----       --------->LBD16    <---------ATHB12                                                       ----      <---------LBD16     --------->AHL20(2)                        <-----------GT1          <-------     <---------LBD16>>>>>>>>>>WRKY38                              --------->YAB1             --------   gaaattctcccggtgatttaggtgaccaataaatgaggatagtgactgtatttgaccacaatgttccattatactatatcacatcaagtcttacaaatcc  5587400     <---------ARR11(3)     --------->ARR11(3)     --------->ARR14(2)    --------->RVE1(1)                                         ----------->GT1    --------->CCA1(1)                                  <---------LBD16                             -- ------>LBD16                      --------->ICU4     <---------ANAC46                            --- ------->GT1                     --------->YAB1     --------->GLK1(2)                         <------ ----->LBD16      --------->YAB1<---------YAB1     <---------GLK1(2)                       <---------HSFB2a(1) --ARR14(2)      <---------At4g35610               --------->ARR14(2)             <----------DOF2 <-- ->ARR14(2)      --------->At4g35610---------->DOF2<---------ARR14(2)  --------->AHL20(2)  --------->HSFB2a(1)   cgaaaaatatcttctattcagcataatgttctatatcataatgcagcattgcagaatcgtggaatcgtttaaaaaaaatacaaactttgagaaaccttcg  5587500                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                          --------->YAB1                                                                                     <---------ZAT18 ------->GLK1(1)    <------ZmHOX2a(1)                                <-----------GT1 --------->ZAT14 ------>ARR14(2)  --------->MYB59                 --------->YAB1 <---------AHL20(2)  --------->ZAT18 ---LBD16     <---------MYB46(3)     --------->AHL20(2)         <---------AHL20(2)---------->DOF2 -------ARR14(2)<--------P           <---------AHL20(2)    <----------DOF2      <---------At4g35610   gatttcgaaacatcactggttaggacatattctacaaatttaaattcttctatgatgttttctttttttattttctaacttcatcagagcgctaataatc  5587600  Previous    Next  AGI:  At5g17000.1    Description:  NADP-dependent oxidoreductase, putative. similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) Range:  from: 5584804    to: 5587066    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g17010.1    Description:  sugar transporter family protein. Identical to D-xylose-proton symporter-like 2 [Arabidopsis Thaliana] (GB:Q6AWX0;GB:Q9LFK1); similar to ATVGT1 (ARABIDOPSIS THALIANA VACUOLAR GLUCOSE TRANSPORTER 1), carbohydrate transmembrane transporter/ fructose transmembrane transporter/ glucose transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT3G03090.1); similar to unknown [Populus trichocarpa] (GB:ABK95072.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved Range:  from: 5587354    to: 5592449    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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