Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            ===========                                                                                          ------>ZmHOX2a(1)                                                                                     ------>ZmHOX2a(2)                                                                                     ================                                                                                    =================                                                                                    =============HOX2a_HOX2a                                                                                    <------ZmHOX2a(2)                                                                                   <-----------ARR10                                                                                   <---------ARR11(3)                                                                                   --------->ARR14(2)       <---------ARR11(3)                                                          --------->ARR14(3)      <---------CCA1(2)                                                            <---------ARR14(2)     <---------AHL20(2)                                                            --------->AGP1    --------->YAB1                                                                 --------->ARR11(3)   <---------YAB1                                                                  <---------ARR14(3) -------->AHL20(2)             ------>MYB46(1)                                    <---------GLK1(1) ---------AHL20(2)             ------>MYB83                                       --------->GLK1(1) -------->AHL20(1)        ------>MYB46(1)                                        ----------->ARR10 ---------AHL20(1)      --------->AtMYB61                                      --------->LBD16 -----YAB1              <---------MYB59                                      <---------LBD16 -->GT1--------->ARR11(3) ------>MYB83                                     <-----------GT1===========   aatttattatatctcaacatataaaaccaaaccaaacaaaacaaaacaaaacaaaacattttcatccgatttgaatttcaccggagatcttcctaatcgg  5583600              ------>ZmHOX2a(1)            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          <---------ANAC58          <---------ARR14(2)          <---------ANAC58          --------->ARR11(3)      <------NtERF2          --------->ARR14(2)     --------->LBD16          <---------ARR11(3)     ------>NtERF2          <---------GLK1(2)<---------ANAC58                             --------->GLK1(1)        ----------->ARR10  <---------ANAC58                             <---------GLK1(1)   ---------->DOF2      <---------CCA1(2)                           <-----------RAV1(2) =================HOX2a_HOX2a  <---------LBD16                     <------ZmHOX2a(2) ====================HOX2a_HOX2a<---------ANAC46             =============HOX2a_HOX2a ====================HOX2a_HOX2a<---------LBD16              <------ZmHOX2a(1)                    <-- ==================HOX2a_HOX2a <---------ANAC46        --------->At4g35610                      <----   agattaaaagtagatcctcgtcgttcataccttgccgggagcgtaagcttgagcaagagcagaggagggatcaggtttccccatgcgagaccgcatataa  5583700                                                  <---------ARR14(2)      <---------MYB46(3)                                                  --------->ARR14(2)      ----------->GT1                                                --------->LBD16          <---------AtMYB61                                               --------->ANAC55(2)       --------->ALFIN1                                               --------->ANAC46          <---------ANAC46                                              <---------LBD16          <---------MYB46(3)                                             ------>MYB46(1)          <---------DEAR3(1)                                          <---------HSFB2a(1)         <---------AtMYB61                                          --------->HSFB2a(1)         --------->ALFIN1                             --------->ARR14(2)--------->HSFB2a(2)  --------->MYB55(2)          -----            <--------P       <---------ARR14(2)<---------HSFB2a(2)  <---------MYB46(3)         ------     ----------->HVH21     --------->ANAC58  --------->MYB52(1)    <---------AtMYB61        --------- ------>ZmHOX2a(2)         --------->ANAC58  ------>MYB83          <---------DEAR3(1)      <---------GLK1(2) ----ZmHOX2a(1)   --------->GLK1(2)       <---------HSFC1(2)       --------->ALFIN1        <---------ARR14(2) -----TOE2(3)    <---------GLK1(2)        --------->HSFC1(2)    <---------DEAR3(1)         --------->ARR14(2)   ggatcgcatgacaggtagagattcttcacaagaaccgatttagaaccttccggaaccctaagttcgacggtggtggtggtgaaattgaaatcggattcct  5583800                   <----------DOF2             ------->MYC2             ------->MYC3             <-------MYC2             ------->PIF5             <-------PIF5            --------->O2            ==================bZIP_DOF            ==================bZIP_DOF            --------->ANAC55(2)            <---------ANAC46            <---------O2            --------->TGA1a                     <---------YAB1            <---------bZIP60(2)             <-----------TGA1            <---------TGA1a               ---------->ID1     --------->MYB46(3)            <----------DOF2                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ->ZmHOX2a(1)<-------MYC3         <---------ANAC58                           <---------GLK1(1) --->TOE2(3)<---------ANAC55(2)   <---------ANAC46                           --------->GLK1(1)     << >GLK1(1)----------->HVH21        <---------ANAC58    <---------YAB1      <---------YAB1    <--------   tagggaaaccactcacgtggtctttgaatatgacctgcttgttcgtcgtcatcgttgttattctccgattcaacttctgatttccaccaatttgttactt  5583900                              <---------YAB1                           <----------DOF2                           --------------->AGL15                           <---------DAG2                           <---------------AGL15                          <-----------------AGL3                      <------NtERF2                      --------->ATERF1(1)       --------->YAB1                      ----------->RAV1(2)       --------->ANAC58                --------->ICU4                     ------>NtERF2              ----------->GT1                 <---------YAB1                    --------->ANAC58            --------->ANAC58              <---------ICU4                    --------->ANAC58            --------->ANAC55(1)           --------->YAB1                   --------->ATERF1(1)   --------->At4g35610                 <---------YAB1             --------->HSFB2a(2)       <---------ANAC58                      --------->ICU4     <<<<<<<<<TBF1<---------ATERF1(1)  <---------ANAC58                 <---------At4g35610   <------  <<<<<<<<<TBF1 <------ZmHOX2a(1)    <---------ZAT18                <-----------GT1     --------->YAB1 <<<<<<<TBF1 <---------HSFB2a(2)     --------->ZAT18             <---------bZIP60(1) --------->YAB1 ---GT1 <<<<<<<<<TBF1<---------ATERF1(1) <---------At4g35610     --------->bZIP60(1)<-------TEIL   cttcttcttcttcttcgaggacgcgcctgctttttatagtggcctctcactcgtaatatcaagtatgaagtcactgctcatgatgattcatcacaatatg  5584000                                                                      <----------DOF2                                *TSS                          <---------YAB1                  <---------ANAC58                           <-----------GT1                  <---------ANAC58      <----------DOF2 <---------ARR11(3)          <-----------GT1  <---------AHL20(2)           --------->ARR11(3)         <-----------GT1   <---------YAB1               <---------AHL20(1)                ----------- ---ARR11(3)   <----------DOF2<---------YAB1            --------->AHL20(1)             <----------DOF2   ttcacaatttttaaactctttcgagcgtttttattgttgacactttcacattttgtgatatattttcatttcctttcacatttcattttctttccaattc  5584100                                                                                      <---------MYB46(3)                                                                                  <---------DEAR3(1)                                                                                 <---------ORA47(1)                                                                               --------->WRKY12                                                                              --------->ALFIN1                                                                             ------->MYC3                                                                             <-------MYC2                                                                             <-------PIF5                                                                             ------->PIF5                                                                             ------->MYC4                                                                             <-------MYC4                                                                             ------->MYC2                                                            <---------YAB1  <---------O2                                                          <------MYB83      =========================                                                          <------MYB46(1)   --------->TGA1a                                                          ----------->GT1   =========================                                                       <------ZmHOX2a(1)    --------->O2                                                   ---------->DOF2          <---------ANAC46                                         --------------->AGL15              <---------ANAC55(2)                                        <-----------------AG----------->GT1 <---------TGA1a                         <------MYB83   <-----------------AGL2           ---------------->PIF3(2)                         <------MYB46(1)<-----------------AGL1         ----------->HVH21                        <---------AtMYB61<---------------AGL15 <---------YAB1<-------MYC3     <-----------HVH21  <---------MYB46(3)         ===================================bZIP_DOF ->CBF                 <--------P<-----------GT1 <------ZmHOX2a(1)  --------->ATHB12 --------->ALFIN1   tctcttctgtcacattttcacaagagttggtgtttatacattactgatataggaaaaggatggtgataaatgagtgacacgtggacggtggtaattgaag  5584200              --------->ICU4           --------->WRKY18(1)          --------->At5g28300         ----------->GT1         ------->GAMYB      --------->MYB52(1)   --------->ANAC58   --------->ANAC46                            --------->At4g35610                  <---------ARR14(2)   --------->ANAC58                            <---------At4g35610                  --------->ARR14(2) ---------->DOF2--------->YAB1                --------->GLK1(2)         --------->GLK1(2)  <<<<<<<<<TBF1 ================MYC_MYB                  --------->YAB1         <---------YAB1     ------->TEIL ===========bZIP_DOF               ----------->GT1             <---------ICU4      <---------CCA1(2)   attaaaagcaacggtcaatattaagaacagaagaatgaggtcaataagaagctgaagacacttcattatgctaaaatctgagattgtatcttcttcttca  5584300                                                               --------->HSFC1(2)                                                               --------->HSFB2a(1)                                                               <---------At4g35610                                                               <---------HSFB2a(1)                                                               <---------HSFC1(2)                                                               <---------ZAT2                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                              <-----------ARR10                                                            --------->LBD16                      <---------GLK1(1)--------->ANAC58   <---------LBD16                      <---------ARR14(2)               --------->WRKY12                      --------->ARR14(2)              --------->DOF5.7(2)                          <-                      --------->GLK1(1)--------->ANAC58--------->WRKY38(1)                         <-         <---------MYB52(1)      --------->ICU4 ------>ZmHOX2a(1)             --------->GLK1(2)   <--   ttttgttctctgttactacttgagaattctctgtaattctcaagctattcctcatcgtttaccggagcttctctcttgagactcttgtagatgagaagtt  5584400              ------->TEIL             --------->ARR11(3)                              --------->YAB1    <---------ANAC58                   <---------ARR11(3)                           --------->WOX13(1)    <---------ANAC46                  <---------CCA1(2)      <----------DOF2      <---------YAB1    <---------ANAC58            --------->WOX13(1)         ------>ZmHOX2a(1)  --------->TOE2(3) --------REM1(1)              <---------YAB1    --------->ARR14(2)           --------->ANAC55(2)   -- ----------RAV1(1)           <-----------GT1    <---------ARR14(2)          <---------TOE2(3)      <- -------TOE2(3)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-----------GT1    <-----------GT1 ----------   gatgttgcgtttcatgaacgtcgtatcaaattatcaatctatatctttcgaatccattttcctctttattatctgatttacgttatcaattacaaaagaa  5584500  Previous    Next  AGI:  At5g16990.1    Description:  NADP-dependent oxidoreductase, putative. Identical to Probable NADP-dependent oxidoreductase P2 (P2) [Arabidopsis Thaliana] (GB:Q39173;GB:Q9LFK3); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G17000.1); similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61471.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol deh Range:  from: 5581661    to: 5584032    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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