Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------TOE2(3)    ------>ZmHOX2a(2)           --------->DAG2        ========================HOX2a_HOX2a          ---------->DOF2      <---------AGP1         --------->CCA1(2)     ------->TEIL<---------YAB1            --------->ZAT14  ----------->GT1              <---------ARR14(2)                    <---------ZAT14 -------->REM1(2)              --------->ARR14(2)                    <---------ZAT18         -------- -------->ZAT14                --------->ARR11(3)                --------->ZAT6         <---------At4g35610 ---------ZAT14                <---------ARR11(3)              <-----------GT1          --------->At4g35610 ------ANAC46----------->GT1<---------WOX13(1)    <------ZmHOX2a(1)--------------->AtSPL8    -------- -->ZmHOX2a(1)           <---------YAB1    --------->ICU4----------->GT1            ------>ZmHOX2a(1)   tgtgtagtaagataaaggaaaattggtatgatggatcttgaagtgaagattaggaattggtgtaataacactgtactcttcccatcctactgctccccaa  5575500                                                                                     --------->ANAC46                                                                                   <---------ALFIN1                                                                                  <---------ZAT14                                                                                --------->ANAC46                                   --------->WOX13(1)                       ----------->RAV1(1)                                --------->GLK1(2)                        --------->ANAC58                               <---------GLK1(2)                         --------->ANAC58                            --------->HSFB2a(2)                          --------->ANAC46                            <---------HSFB2a(2)                 --------->CCA1(2) --------->ZAT14    <-----------GT1      --------->ZAT18         --------->ANAC58      <---------ALFIN1 --------->AGL3   <---------At4g35610            --------->ANAC58     <---------REM1(2) ->LBD16          --------->At4g35610    <----------DOF2   --------->LBD16 --------->ANAC46   attaagtcaccttcttcgtaatctgagtgtccagaatctatcactttagacactccaaaccctgagataggctacacacaacacaacacagcataagtct  5575600                      ---------->DOF2                  <---------ANAC46                          <------NtERF2                  <---------ANAC58                         --------->LBD16                       <---                  <---------ANAC58                         ------>NtERF2                        =====                 <-------TEIL                             <---------LBD16                       <----                 <-----------------------TaNAC69(2)       <---------ANAC46                     <-----         <---------YAB1                                  <---------ANAC46  --------->ZAT14     ------      --------->AHL20(2)                                 <---------LBD16   <---------ZAT14 <---------At4g35610      <---------AHL20(2)                             <---------ANAC58      --------->At4g35610<------ZmHOX2a(1)     <---------AHL20(2)                           <-----------GT1    ================================     --------->AHL20(2)                    <---------ARR11(3)   --------->ALFIN1         ---------->CDC5     <---------AHL20(1)  <---------------------WRI1  <---------ANAC58<------ZmHOX2a(1)   <-----------RAV1(2)   ctcacaatttttttatagatgcgtttaagcgatgaacaataagtagatgtttttaccttgccgggagtgaaggactgagcagtagcagggctcagaggat  5575700                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                              <---------RAP2.6(3)                                                              <-----------HVH21                                                              ------>NtERF2                                                             --------->RAP2.3(2)                                                             --------->RAP2.6(2)                                                             --------->RAP2.3(3)                                                             --------->RRTF1(3)                                                             --------->DEAR3(1)                                                            --------->RAP2.3(1)                                                           ------->GAMYB                      <------      ------>ZmHOX2a(1)           --------->ANAC58        --------->ANAC46                   <-------      ==============================HOX2a_HOX2a           --------->DEAR3(1)     --------->ANAC58  <- --------->GLK1(1)                --------->ANAC58       ------>MYB46(1)         --------->ANAC58  -- --------RAV1(2)             <------ZmHOX2a(2)           ------>MYB83<---------ARR11(3) <---------ARR11(3) ============HOX2a_HOX2a   <------ZmHOX2a(1)           --------->DEAR3(1)       --------->ZAT18 <---- --ZmHOX2a(2)             --------->ICU4               --------->AtMYB61        <---------ZAT18 ----- ----ARR14(2)       <---------TOE2(2)                 --------->MYB46(3)  <----------DOF2<------ZmHOX2a(2) --->ARR14(2)       <---------TOE1(2)          --------->GLK1(2)     --------->ARR11(3) --------->ARR11(3) ==HOX2a_HOX2a     <---------AtLEC2           <---------GLK1(2)<------NtERF2  <---------At4g35610<---   caggtttcctcatacgatttcgcatgtaaggatcacaagacaagtagagattcttcaccaacgccgtcatagatccctttagcaccctaagatcgatggt  5575800                                                 --------->ANAC55(2)                                                 <---------ANAC55(2)                                                 --------->ANAC58                                                 ----------->GT1                                                 --------->ANAC58                                         --------->ANAC55(2)                                         --------->ANAC55(1)                                         <---------ANAC55(2)                                         <---------ANAC46                                         <---------ANAC58   <---------At4g35610                   <---------ANAC55(1)  <---------AtMYB61                      <---------ANAC58        <---------MYB46(3) <---------------------WRI1     --------->ARR14(2)             <---------ANAC58         <---------HSFB2a(2) ---MYB46(3)                    <---------ARR14(2)  <-----------GT1           --------->ETT(2) --AtMYB61              <---------ANAC58 --------->ANAC58      <---------ANAC58 <------NtERF2 --------ANAC46         <---------ANAC58 --------->ANAC58      <---------ANAC46------>NtERF2 ------->ALFIN1      --------->GLK1(1)--------->ARR14(2)--------->ANAC58     ---------->ID1 -----AtMYB61       --------->ARR14(2)<---------MYB52(1)--------->ANAC58 <-------GAMYB  --------->HSFB2a(2) ---->ALFIN1        <---------ARR14(2)<---------ARR14(2)--------->ANAC46<---------MYB46(3) ------MYB46(3)     <---------GLK1(2)<-----------HVH21--------->ZAT6    ------>ZmHOX2a(2)   ggtggaggtgattacaaggtcggattccttggcgaaaccggttacgtaatcaagtaacacgacttgcttgttgatcgttgtcgccattttttagaaaatg  5575900                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                <---------MYB52(1)                                                               --------->At5g28300                                                            <---------ZAT14                                                         --------->MYB52(2)                                                       <---------MYB52(1)                                                       <--------P      --------->ANAC58                                                      <-------GAMYB<---------YAB1                                                      --------->At5g28300<----------ID1           <--                      <---------AHL20(2)            <---------TOE2(3)---------->DOF2       --------->GLK1(2)             *TSS   <----------DOF2         --------->ARR11(3) <-------GAMYB            --------->ARR11(3)            ------>ZmHOX2a(1)               <---------ARR11(3)----------->GT1           <---------ARR11(3)           --------->TOE2(3)              --------->ANAC58  --------->ZAT18          <------ZmHOX2a(1)        --------->ARR14(2)  ---------->ID1--------->ANAC58  <---------ZAT18        <---------ANAC46   tttgtttttggttcctcaacgtctttatttgtctctacttatacaagctcttctacggttagtgcggttattaaagccacaagttgaggagataatcttt  5576000                                                                    <---------ANAC58                                                                  --------->ARR11(3)                                                                  <---------AHL20(2)              ---                                                               --------->ATHB51                 <----                                   <---------ATHB12         --------->YAB1                 --------->ANAC58                                  <---------TOE2(3)  <---------ANAC46      <----------DOF2 --------->ANAC58           <---------------------WRI1                <---------ZAT6 <---------ANAC58   --------->AtLEC2 -------AHL20(2)        --------->AtLEC2     --------->TOE2(3) <---------ICU4      <-----------------   ttatttgctaaactactattctaacaatgcaaaactaatgaagccaaacttagttgtgttaagcataatttcttgcgcttttatgtgtgatgcaaacaat  5576100                                                                        --------->TOE2(3)                                                                        --------->TOE1(3)                                                                        <---------MYB59 <---------ANAC46       <----------DOF2                    --------->ANAC58 <---------------------WRI1                                --------->ANAC46 ------>ALFIN1     <---------ANAC58            ----------->GT1---------->DOF2                  <----- -------RAV1(1)    <---------ANAC58        ---------->DOF2 --------->ANAC58             ------->TEIL ----WRI1     <-----------RAV1(1)<---------TOE2(3)  --------->GLK1(2) ------->TEIL     <---------CCA1(2)   gtggggggattaaacaatgttgcatactttaagttgatgtttttttaaagagaaaatccaaacgcaaagaagaacctaaaccgaattttgtatctatttg  5576200                                                       <---------------AGL15                                                      <-----------------AGL3                                                --------->ANAC58                      <----------DOF2           --------->ANAC58                   <---------ARR11(3)           --------->ANAC46                   --------->ARR11(3)         <---------ALFIN1                --------->TOE2(3)            <---------MYB55(2)               --------->YAB1               ------>MYB83 <---------YAB1           --------->MYB46(3)               ------>MYB46(1)      --------->TOE2(3)                   --------->AtMYB61      --------->YAB1<---------YAB1       --------->MYB46(3)        <---------------AtSPL8          --      --------->TOE1(3)     --------->TOE2(3)--------->MYB46(3)    --------->DAG2                  -- ----AHL20(2)  <---------ICU4  ---------->DOF2----------->RAV1(1) ---------->DOF2  --------->YAB1  --   attcgaaaccataacaaacattatctttatccataaaacaaaaaccacccacacaaactctaattggataaagtacaagtatcaaacatagtttcactca  5576300                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                              -------                                                                 <----------DOF2              -------                                                         <---------LBD16              <---------ARR11(3)          --------->MYB46(3)                         <---------ARR11(3) --------->ANAC58     --------    --------->REM1(1)                                --------->ARR11(3) --------->ANAC58     <-------    --------->MYB46(3)                      --------->PCF2<---------LBD16    <-----------HVH21-------  ----------->RAV1(1)                    <---------HSFB2a(1)   <---------At4g35610   --------->REM1(1) ------->ANAC58                          <---------HSFC1(2)<---------HSFB2a(2)   <---------At4g35610< ------->ANAC58                          --------->HSFC1(2)--------->HSFB2a(2)   --------->At4g35610- ------->ANAC46  ---------->ARF1         --------->HSFB2a(1)   --------->At4g35610  <-------TEIL ----   cgagcaacaacaacaacttgtttcccaacattcttaccatggaagagtcccacaagagcttcgggagctttctcaagcccatcagctacatcttccacgt  5576400  Previous    Next  AGI:  At5g16960.1    Description:  NADP-dependent oxidoreductase, putative. similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61471.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) Range:  from: 5574284    to: 5575913    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16970.1    Description:  AT-AER (ALKENAL REDUCTASE); 2-alkenal reductase. Identical to Probable NADP-dependent oxidoreductase P1 (P1) [Arabidopsis Thaliana] (GB:Q39172); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G17000.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol deh Range:  from: 5576171    to: 5578078    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version