Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->YAB1                    --------->WOX13(1)                  <---------ATHB12                 --------->AtLEC2                 --------->ANAC58                 --------->ANAC58           <---------ZAT2           --------->ZAT2           --------->At4g35610           <---------At4g35610     --------->At4g35610   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     --------->ZAT6                <---------ALFIN1      <-----  <---------At4g35610 <---------ATHB12   <-----------GT1                --------->MYB46(3)  --------- ---->GLK1(2)    --------->ANAC46     <----------DOF2        --------->ANAC46             <----------   tctgagcagttgcagctccaagcaatcacacttcttgctgctttaactctccatttgattttcccacaatgacatccaccttcatgaaatattaactctg  5572200                    --------->GLK1(1)           -------->HAHB4           --------->ATHB12           --------->ATHB51           <---------ICU4           -------->ATHB1          <---------YAB1          <---------ATHB51          --------->ICU4        <---------ICU4          --------->ANAC46                                                ----- ----YAB1 <---------ATHB12      --------->ANAC58                                           ---------- >ZAT6 ------>ZmHOX2a(1)        --------->ANAC58        ----------->GT1<---------YAB1     <---------AHL20(2) -GT1 <---------MYB59        <---------ATHB12<---------TOE2(3)---------->DOF2    <---------ATHB51   attccattcctaattattgctgaaatctacaatcactccatcagtttaagaatttagccagaaaaaaagaaatatgatcagcaatagttgatttaaagaa  5572300                                                                        <---------ARR14(2)                                                                 --------->GLK1(2)                         <---------GLK1(2)                      <---------ARR14(2)                         <---------ARR11(3)                     <---------ARR11(3)                <-------TEIL    --------->WRKY12                <---------GLK1(2)               --------->ARR14(1)<---------WRKY18(1)            --------->ARR14(2)                  <              <---------GLK1(2) --------->WRKY45                --------->ARR11(3)           *TSS   -    ----------->GT1      --------->ARR11(3)                   ----------->ARR10            <---------ANAC58   ----------->GT1       --------->ARR14(2)                   <---------YAB1               <---------ANAC46 ---->CCA1(2) --------->ARR11(1)--------->WRKY38(1)    <------ZmHOX2a(2)<---------GLK1(2)  <---------ANAC58 >DOF2 --------->AHL20(2)<---------ARR14(2)        --------->HSFB2a(2)  --------->ARR11(3)<-------TEIL   acgagaagataaaatagattcgaaccagattttgttgaccagtgtgtttatttcgcgatcgatgaagattctcagattttgttcagacgagatgcgtcta  5572400                                                                                <------------CBF                                                                            <----------DOF2                                                                           ------>ZmHOX2a(2)                                                                           <-----------------AGL3                                                                          <------ZmHOX2a(2)                                                                          <---------RVE1(1)                                                                         --------->GLK1(2)                                                                         --------->ARR11(3)                                                              <---------ZAT18  --------->ATHB12                                                              --------->ZAT18 <---------AHL20(2)                                                        <----------DOF2  <---------ARR11(3)                                                      --------->At4g35610--------->ARR14(2)                                                   ============================HOX2a_HOX2a               <---------DAG2                      <------ZmHOX2a(2)     <---------ARR14(2)      ----               <----------DOF2                    --------->ARR11(3)    <------ZmHOX2a(1)   <-------- ---------ARR14(2)       <---------HSFB2a(2)      <---------ARR11(3)---------->DOF2         <-------- -------->ARR14(2)       --------->HSFB2a(2)    ----------->ARR10 <----------DOF2      ------------>CBF   cgaatatgtgagcgagactttttccttccacaaactaaacttatcgggctaagatcagctttagtgggcttaaaggatcttttattgggcccaatatatg  5572500                                                                                <----------DOF2                                                 <------------CBF        <------ZmHOX2a(2)                                               --------->ICU4 ---------->DOF2  *TSS   ------>ZmHOX2a(2) -------->CBF     <---------AHL20(2)       <---------ZAT18  <---------YAB1   <---------ALFIN1 -AHL20(1)       --------->AHL20(2) <---------ZAT6<---------WOX13(1)    <---------ARR11(3) -ARR11(3)   <---------YAB1         ----------->HVH21     --------->YAB1--------->ARR11(3)   tcaattcttcattttttgataaaatttctgaagaggtagtgacactgccctaattgaccatcatcaaagactaagatcaccactttgatccagttgaaac  5572600               --------->ANAC46              --------->SPL7                                         ---------->DOF2              --------->RAP2.6(3)                                 --------->AtLEC2           <---------ANAC58                                    <-------TEIL            --------->At4g35610           <---------ANAC58                                   <------ZmHOX2a(2)        <---------At4g35610          <---------------AtSPL3                             --------->ARR14(2)       <---------ARR14(2)        <---------GLK1(1)             <---------ICU4         <---------ARR14(2)       --------->ARR14(2)        --------->GLK1(1)  <---------MYB46(3)               <------ZmHOX2a(1)  --------->ALFIN1 -----     <---------TOE2(3)   <---------MYB52(1)    --------->ALFIN1------>ZmHOX2a(2) --------->ALFIN1   tgaaattgagatttcttacggcaattcgttgggcgattcaaaatggcaagtgagggagcaaaggatccatggaaaggagaagagtggggaactgagaatg  5572700                                       <---------ANAC46                                       <---------bZIP60(1)                                       --------->TGA1a                                       --------->O2                                       <---------O2                                    ----------->TGA1                               --------->MYB52(1)                         <---------ANAC58                         ----------->GT1                                              <---------HSFC1(2)                        <-----------------------TaNAC69(2)                            --------->HSFC1(2)               --------->MYB46(3)   ----------->HVH21                                 <---------At4g35610         --------->ANAC58<---------ANAC58                                     --------->ANAC58      -         --------->ANAC58<---------ANAC46        <------ZmHOX2a(1)            --------->ANAC58  -----       ==========================================bZIP_DOF                    <---------------AtSPL8--       ---------->DOF2--------->ALFIN1 <---------TGA1a           <---------ZAT18      --------->At4g35610 ---->YAB1   ----------->RAV1(1)   <-----------HVH21             --------->ZAT18     ------->TEIL <--   agaagacgaagaagccaacaacaagtggtgtgaaaacggtgacgagagcgaggaaacaaataccgaggggacttgaagacaagtacgaagcttacttcct  5572800                                         <-------TEIL                                      <---------HSFC1(2)      <---------ANAC46                                      --------->HSFC1(2)     --------->ABI4(2)     --------->ANAC58          --------------------->WRI1    <---------ZAT2     --------->ANAC58      <---------------AGL15            --------->ALFIN1   ---------->DOF2         --------------->AGL15         <---------DEAR3(1) --------->ANAC46         <---------ANAC58               ------>ZmHOX2a(2)                          - -------->LBD16           <---------ANAC58             --------->ARR14(2)                      ------ ->ZmHOX2a(1)             <-----------------AGL1       <---------ARR14(2)                     ------- ------->LBD16            ----------------->AGL1      <---------PCF2   <---------YAB1 =============== -------LBD16             <-----------------AG--------->TOE2(3)      ----------->GT1  <------ZmHOX2a(2)   cccgcgaaagccatggccaagggctcttgcctactatggaagtttcatccttggtgggatcggtgctggtatggttattgaagcttggatcaacaaaaaa  5572900                                                                                               ------                                          <---------WOX13(1)                               <---------ARR14(2)                             <----------ID1                                                --------->ARR14(2)                          --------->GLK1(1)                      --------->HSFB2a(2)      --------->GLK1(1) --------->DOF2           <---------ARR14(2)                  --------->ARR11(3)          <---------GLK1(1) --->DAG2        --------->ATHB12      <---------YAB1     <------ZmHOX2a(1)           --------->ZAT6 --->DOF2    <------ZmHOX2a(1)    <---------ANAC55(2)   --------->ANAC58         --------->TOE2(3) ===================HOX2a_HOX2a   --------->ANAC55(2)   --------->ANAC58         --------->TOE1(3)   gtcaaagaagatggaggagtcatttgggaattcgacaagtgatgatagataagtatgtaaggaacatctagagagagtgtctcccttaacacaaatccgt  5573000                               --------->GLK1(2)                        --------->GLK1(1)                        <---------GLK1(1)                     --------->LBD16                    --------->HSFC1(1)                    --------->HSFB2a(2)                     <---------AHL20(2)                    <---------HSFB2a(2)               <---------WOX13(1)--------->TOE2(3)               <---------MYB46(3)       ---------->TaMYB80  <---------YAB1                     ------               --------->MYB52(2)  <---------LBD16  --------->ATHB12    --------->YAB1 <---------ARR11(3) --->LBD16 <---------YAB1     <---------GLK1(2) --------->GLK1(1)      <---------YAB1  --------->ARR11(3)   agattggattattttgtttgttccagaattcagaatttgtggaatatcagaaatcgattgatataattctgttaccataatgcattgaagatgttcgacg  5573100  Previous    Next  AGI:  At5g16940.1    Description:  carbon-sulfur lyase. similar to unknown [Populus trichocarpa] (GB:ABK92974.1); contains InterPro domain Glutathione-dependent formaldehyde-activating, GFA; (InterPro:IPR006913) Range:  from: 5571553    to: 5572393    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16950.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO62232.1) Range:  from: 5572579    to: 5573073    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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