Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------TOE2(3)                                                          <-----                   <-----------GT1                                                      ----------->GT1                 <---------AHL20(2)                                                  <---------ANAC46            <---------AHL20(2)                                                       <---------O2        ------>ZmHOX2a(1)               <---------AHL20(2)                           --------->O2    ------->TEIL--------->YAB1     <---------AHL20(2)                               <-------TEIL  <--    --------->ARR14(2)    <---------ANAC58                                  <---------DAG2    -------    <---------ARR14(2)    <---------ANAC58 ----------->GT1    --------->ANAC46   <---------At4g35610   <---------CCA1(2)<---------YAB1--------->AHL20(2)------>ZmHOX2a(1)       <----------DOF2 ---------   aatgtgtatcctattcaattttaacattgtttgctattttatataatgtaattcctgttcatcttcgcaacttggctacttttagctacgtggaaatatt  5554900                                             ---------->DOF2                                            <---------AHL20(2)                                      <-----------HVH21                                     --------->ANAC46                                     --------->bZIP60(2)                                     --------->ANAC58                                     --------->bZIP60(1)                                     <---------TGA1a                                     --------->O2                                     <---------O2<---------ARR11(3)                                     --------->TGA1a                                     <---------bZIP60(1)                                     ===================bZIP_DOF                                     --------->ANAC55(1)                                     <---------ANAC55(2)                                     --------->ANAC58                                    <-----------STF1   <---------MYB52(2)             <---------REM1(2) ------->TEIL                    <-----------HVH21 ----YAB1                ------->TEIL--------->ANAC55(2)        <---------ANAC58 -------YAB1            ----------------------->TaNAC69(2)      <---------ANAC58    ----------->HVH21 -->AHL20(1)          <---------ANAC46<-----------TGA1  <------------CBF <---------AHL20(2) >ICU4        <-----------GT1  ------>ZmHOX2a(1) --------->ARR11(3)      --------->AHL20(2)   -------   atgaaactaacattttatacaattgtgtatgtcctcttcacgtcatttaaaggtctctcattgtctgcttgttattttattcccttgcgacgttttaagt  5555000                                      ------>MYB46(1)                                      ------>MYB83                                    <---------ALFIN1                                              <--                                    <---------MYB111(2)                                    <---------AHL20(1)                                    <---------MYB55(2)                                     --------->AHL20(1)                                 --------->AtMYB61                                         --------->ARR11(3)                                 <---------ALFIN1                                        <---------ARR11(3)        --------->ARR11(3)      --------->MYB46(3)                                       --------->ARR11(3)    --------->At4g35610       <-----------GT1                    <---------TOE2(3)       <---------AHL20(1)    <---------At4g35610     <-----------GT1                     ---------->DOF2          --------->AHL20(1) -->ANAC55(2)      ----------->GT1  --------->MYB46(3)       --------->TOE2(3)      ----------->GT1   attagcagatgatatagacatgggtgaatttttcaccaccagcctgtagaaattatctacaaacattaaagtttttcaagttgagttagaaaatattttg  5555100                                           <----------DOF2                                       <------NtERF2                             <---------ARR11(3)                             --------->ARR11(3)                            --------->RVE1(1)                            <---------GLK1(1)           --------->bZIP60(1)                            <---------CCA1(1)         <---------WRKY18(1)                            --------->GLK1(1)        --------->WRKY38(1)                            -                            <---------RVE1(1) <---------YAB1 --------->ANAC46                       -               ------->TEIL<---------ARR11(3) <---------AHL20(2)                                   <-            --------->ANAC55(2) <----------DOF2 <------------CBF                     <-----------HVH21   <----------DOF2         --------->ARR11(3) --------->AHL20(2)         <---------YAB1  --------->At4g35610 -------At4g35610  <---------YAB1 <---------AtMYB61  --------->WRKY12    <---------AHL20(2) <------ZmHOX2a(1)   agctacttttatttatgtattttgattcagatatctttggtggcacttttaattgttgacctcacaaaactgttttttattagtctccatcagaggagtt  5555200                                      <----------DOF2                                   <---------ARR14(2)                                   --------->ARR14(2)                      <----------DOF2                                  <-------GAMYB<---------At4g35610      <---------ARR11(3)                                 <---------MYB46(3)           ------>ZmHOX2a(2)                                 <---------DEAR3(2)         --------->ARR14(2)                                <---------ANAC58            <---------ARR14(2)       <---------ICU4                                <---------DEAR3(1)          --------->ARR11(3)       --------->ARR14(2)                                <---------DREB2C(2)<---------ARR14(2) <---------MYB52(1)                                <---------ANAC58   --------->ARR14(2) --------->DOF5.7(2) -------->ATHB12         --------->ZAT14       --------->At4g35610   --------->TOE2(3) -------->YAB1           <---------ZAT14  <---------TOE2(3) <---------ARR11(3)       <---------ARR14(2) --------YAB1        <---------HSFB2a(2)  <---------TOE1(3)<------ZmHOX2a(1)      --------->YAB1<----   gatcataggcacttcttcatataccagaacactggcggttctttgaggtagcagaaatggaggatcgtcatcgttatctttttttcatatttgccattat  5555300                                                     <----------DOF2                                                 --------->ANAC58                                                 ===============bZIP_DOF                                                 ===============bZIP_DOF                                                 <---------TGA1a                                                 --------->TGA1a                                                 --------->ANAC55(2)                      <---------LBD16                                                 --------->ANAC55(1)         ---------->DOF2                               <---------AHL20(1)--------->ANAC46          --------->TOE2(3)                               <---------AHL20(2)--------->ANAC58          --------->TOE1(3)                               --------->AHL20(2)<---------O2           <-----------GT1  <---------ANAC46                               --------->AHL20(1)--------->O2         <---------WOX13(1) <---------ANAC58                         ------->GAMYB  <-----------RAV1(1)    <---------ZAT14 --------->ANAC58   <---------YAB1        ==================================MYC_MYB --------->ICU4        <---------ANAC58 -------GT1             --------->MYB46(3)     <---------ALFIN1--------->ZAT14 --------->ANAC58  ----   acattatgttcaggctcaacaaggtaaccacattttattgcattgttgcacacgtcttttgtctgtttactgattaacctaaagcaatatttcgtggatg  5555400                                                                  --------->MYB52(1)                                                              ------>NtERF2                   <------                                                             <---------ANAC46               <--------                                                         <--------P                         ---------          --------->YAB1                                <-------GAMYB                      ----------      --------->YAB1               <---------ARR14(2) --------->LBD16                     <---------MYB52(1)      <---------ICU4               --------->ARR14(2)<---------ANAC46          <---------ARR11(3)      -------->ATHB1              <------ZmHOX2a(1)  <---------ANAC58          --------->ARR11(3)     <---------ATHB12      ----------->HVH21         <---------ANAC58         <---------CCA1(2) -----   --------->WOX13(1)    ------>ZmHOX2a(1)           <---------ANAC55(1)   ----------------->AGL3 ------>DOF2         <-----------GT1 <-------TEIL   <---------LBD16    ------->TEIL       <----------   aaagtcaatcattcataactatatttcctctcaccaggattcatcagtttggattgcgggttgccgagtaacgagcctccatatattgaaccggtaaccg  5555500                                                               --------->HSFB2a(2)     <---------ARR14(2)                                                               <---------HSFB2a(2)     --------->ARR14(2)                                                            --------->ARR14(2)       <---------RAP2.6(3)                                                            <---------ARR14(2)      --------->RAP2.6(2)                     <-----------ARR10                --------->LBD16           --------->DAG2    --------->ARR14(2)         --------->STY1(1)     --------->HSFB2a(2) --------->ZAT14 ---LBD16          --------->LBD16                   <---------HSFB2a(2) <---------ZAT14 -ARR14(2)       <---------LBD16                  --------->GLK1(2)      <---------ZAT18 >ARR14(2)     <---------ARR14(2)            --------->At5g28300     <---------------AtSPL8 ->HVH21       --------->ARR14(2)     <---------KAN4(2)     --------->GLK1(2)  ---------->DOF2 ---->LBD16<---------At4g35610 <---------STY1(1)  <---------ARR14(2) --------------->AtSPL3         - -HVH21 <---------YAB1<------ZmHOX2a(2)     ----------->GT1<---------GLK1(2)--------->ANAC46        <   gattagtattctcatcggatgcggatcacatccctagtggaataagcggtagaatccagaagaatctggaagcagtacacataaagccgtatttgtttct  5555600                                                                      --------->ZAT2                                                            <---------ANAC55(2)                                                            --------->ANAC55(2)                                                           <-------TEIL                                                          --------->CCA1(2)                                                         <---------ARR11(3)        --------->HSFB2a(2)                              <---------ARR14(2)                      ----        <---------HSFB2a(2)                              --------->ARR14(2)                      <---    <----------DOF2--------->ANAC58              <---------ARR14(2)   <---------ZAT2         <------- -------->ARR11(3) --------->ANAC58              --------->ARR14(2)---------->DOF2   ----------->GT1 ---------ARR11(3) --------->ANAC46         ------>ZmHOX2a(1)    <---------YAB1   <---------AtLEC2<--   gagatactttccagatgggctacgaaattgctatactctagatgtccttcagaaccgaagatacatgatcaaagctgtgtttgtgtatggaaattacgat  5555700      <---------ICU4      --------->YAB1      --------->ATHB12      -------->HAHB4     <---------YAB1     --------->ICU4                                                       <---------WRKY12   --------->YAB1                                                         <---------WRKY38(1)  --------->ICU4                      ------>ZmHOX2a(1)                  --------->WRKY18(1)  <---------YAB1            ------->TEIL       <------MYB46(1)        --------->DAG2 ------->GT1               <---------CCA1(2)   <------MYB83<---------ANAC46                    ------ ------MYB46(3)         ------>ZmHOX2a(2)     <---------MYB46(3)    ---------->DOF2<---------ZAT6 --YAB1 <---------YAB1  =====================HOX2a_HOX2a--------->WRKY12<-----------HVH21     <------ -----GAMYB   --------->LBD16        <---------MYB59    --------->WRKY38(1)        --------->ALFIN1<-   ggttataatgattatccgagttttgatctgtatctaggtcctaataagtgggtaagagttgacttggaaggaaaggtcaatggcagtgttgaagagatta  5555800  Previous    Next  AGI:  At5g16890.1    Description:  exostosin family protein. similar to ARAD1 (ARABINAN DEFICIENT 1), catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G35100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39459.1); similar to hypothetical protein OsI_004077 [Oryza sativa (indica cultivar-group)] (GB:EAY76230.1); similar to Os01g0811400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044591.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 5551632    to: 5554920    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g16900.1    Description:  leucine-rich repeat protein kinase, putative. similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G21340.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59680.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45750.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro Range:  from: 5555257    to: 5559718    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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