Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ATHB12                                                 <---------MYB59                                                 --------------->AGL15                                                 <---------------AGL15                                                <-----------------AG                                                ----------------->AGL1                                                <-----------------AGL1                                          --------->AHL20(2)                                          <---------AHL20(2)                                     --------->ARR11(3)                                 ---------->DOF2--------->ANAC55(2)       <---------GLK1(1)                --------->AHL20(2)   <---------ARR11(3)    ---------->TaMYB80                <---------AHL20(2) <---------TOE2(3) <---------WOX13(1)  <---------ARR14(2)         <------ZmHOX2a(2) <---------HSFB2a(2)  ----------------->AG     --------->ARR14(2)    ------        <---------ARR11(3) --------->HSFB2a(2)<-----------GT1  <-----------HVH21     --------->HSFB2a(1)   cccaaaaccagatcacatataaattctttccaaaacaaaggtatttatttacctgattgggaatatgtcacgatggatttgctccaaacgttctaaatca  5526200                                                                                          -----------                                                                                         ----------->HVH21                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                               <-------PIF5                                                   ------>ZmHOX2a(1)           ------->PIF5                                               --------->ARR14(2)              --------->LBD16                                               <---------ARR14(2)            <---------LBD16     --------->ATHB12                        <---------ANAC58            --------->ARR14(2) ----------->GT1--------->ANAC58             <---------ANAC58            <---------ARR14(2)        -- --->YAB1       --------->ANAC58        <----------DOF2  --------->YAB1 --------->GLK1(1)--------->ANAC46   gaagggtttattggtctgaagcaaatagttggacgacgagcgattttgggttcctccattgatgaattctccacaaatccacggggaaaacgcgacattg  5526300                                                                                         <---------ETT(1)                                                                                         ----------->HVH21                                                                                         --------->DEAR3(1)     --------->ATHB12       <---------GLK1(2)                 --------->GLK1(2) --------->GLK1(2)    <---------YAB1     --------->TOE1(3)                 ---------->DOF2   <------ZmHOX2a(2)    --------->ICU4     --------->TOE2(3)           --------->At4g35610    <---------ARR11(3) >RAV1(1)            -------->P     <---------DAG2 ----------->RAV1(2) --------->HSFB2a(2)      <---- ---->ZmHOX2a(2)   --------->MYB46(3)              <---------At4g35610 <---------HSFB2a(2)------>NtERF2   atcgagatgattaagactcaaacaacctcaaattctcaatttttgatactttcatctgagaaagaatcgagttcgagatcaaaatcggtctccgacccgt  5526400                                --------->LBD16                               --------->HSFB2a(2)                               --------->HSFC1(1)                               <---------HSFB2a(2)                               <---------------AGL15                        <---------TOE2(3)                        <---------TOE1(3)                      <---------TOE2(3)   --------->ALFIN1                     <<<<<<<<<MYB98                          ---------->DOF2     ====================                    <-------GAMYB                            ==============================bZIP_DOF                   <------MYB46(1)                 <-------GAMYB      --------->HSFB2a(2)                   <------MYB83--------------->AGL15     ------>ZmHOX2a(2)       <---------O2                  <---------MYB46(3) --------->YAB1========================================MYC_MYB                 --------->ALFIN1  --------->GLK1(2)    <---------At4g35610      --------->TGA1a                 <--------P--------->GLK1(1)      --------->MYB52(2)  <---------LBD16            <---------LBD16<---------GLK1(1)      <---------MYB46(3)  <---------HSFB2a(2)   ---------          --------->ARR14(2)  ----------------->AGL2    --------->At4g35610      ====================          <---------ARR14(2)  ----------------->AGL1   --------->ARR14(2)        --------->O2 -----MYB52(1)--------->LBD16 ----------------->AGL3   <---------ARR14(2)        <---------TGA1a   --   ttgtctgaatcggaaccgggtgggttagggtttccagaatcagaagatgggtttgttgatctgcaaaggtttctcggagagtcaagtgggaatcgaaaga  5526500                                                              <---------RAP2.6(3)                                                        <----------DOF2                                                       <---------ANAC58                                                   <---------ANAC58                                                   <---------ANAC58                                                  --------->ATHB12                                                <---------WOX13(1)                                               <---------ANAC58                                               --------------------->WRI1                                               <---------ANAC58         --------->MYB52(1)                    <---------AtLEC2      --------->ANAC46        --------->TOE1(2)                 <---------ARR14(2)  ------>NtERF2 ==bZIP_DOF                               --------->ARR14(2)---------->ID1     <---------MYB52(1) ->DOF2<---------MYB52(2)             --------->DAG2   <---------ANAC58 <---------ALFIN1        ----- ==bZIP_DOF                          ---------->DOF2<---------WOX13(1)  --------->ANAC46        <---- --------->GT1 <----------DOF2 <------ZmHOX2a(1)<----------DOF2   *TSS<---------ALFIN1          -----   aatgtgaaaacaaacgacttttggagaagaagaggaaggaaaagtatttgcttgattgctttgccgtcttccccacacatcgttatggcttcaagcgaag  5526600                               <---------ANAC46                               <---------ANAC58                               <---------ANAC58                           ------->MYC4                           ------->PIF5                           ------->MYC3                           ------->MYC2                           <-------PIF5                           ------->PIF4                <---------ARR14(2)                           <-------PIF4                --------->ARR14(2)                           <-------MYC3                ------->TEIL                           <-------MYC2            <---------ZAT18                           <-------MYC4            --------->ZAT18                          --------->O2           ------->MYC4                          --------->ANAC55(2)    <-------MYC4                          <---------ANAC58       ------->MYC3                          <---------ANAC58       ------->PIF5                          <---------bZIP60(2)    <-------PIF4                          <---------TGA1a        ------->PIF4                          --------->TGA1a        <-------MYC3                          <---------ANAC55(2)    ------->MYC2                          <---------O2           <-------MYC2                         ------------>OsbHLH66   <-------PIF5                     --------->At4g35610        ===============================bZIP_DOF                     <---------At4g35610        ===============================bZIP_DOF             <---------LBD16 ------->TEIL       <---------TGA1a                 --------->ETT(2)          <<<<<<<<<TBF1----------->HVH21        --------->TGA1a                 --------->bZIP60(1) ===================================bZIP_DOF   ------------>OsbHLH66            --------->ANAC46 <----------DOF2  <------ZmHOX2a(2)           <------------OsbHLH66       <----------DOF2 ---->HSFC1(2)   --------->ARR14(2)         --------->ANAC58        <----------DOF2  --------->GLK1(2) -----HSFC1(2)   <-----------ARR10          --------->ANAC58   <---------ICU4   <---------bZIP60(1)-- ---->HSFB2a(1)  <---------ARR14(2)   <---------MYB52(2)      <---------YAB1  <-----------GT1      <-   catctttgattcttcttcggatcatctcacgtgccttgcgactaacaagcacgtgcgcatcttcatcattcttttacttttgacgacattctattgttta  5526700                                                       --------->YAB1                                              --------->ARR14(2)                                              <---------ARR14(2)                   --------->AHL20(2)                                          --------->At4g35610           --------->ANAC58                                          <---------At4g35610        --------->TOE1(2)                                 --------->ZAT18       <-----------------AGL3  <---------YAB1                  --------->TOE2(3)  <------ZmHOX2a(1)<---------YAB1--------->DEAR3(2)   <---------ZAT6 --------->YAB1 <---------ZAT14     <---------ARR11(3) --------->ANAC58 ------->ZAT14   <<<<<<<<<ARR1   --------->ZAT14     --------->ARR11(3) --------->ANAC46 --------ZAT14   <<<<<<<<<ARR2   <---------ZAT18<-------TEIL       --------->PCF2 <---------YAB1   gtttagtgacaacaaaacaatcttagtatagctagtgcaggatgagcagattcaatatcatattttgggaacccacgatatatgattatatgttcagaac  5526800                                     <---------ANAC55(2)                                     --------->ANAC55(2)                              --------->TOE2(3)                             <---------ANAC58                             ----------->GT1                            --------->AtLEC2                             <---------ANAC58                       ------>NtERF2                             <---------ANAC55(2)                   --------->ANAC58                             <---------ANAC46                      --------->ANAC58                 <---------REM1(1)  <-------TEIL              <-----------GT1                       <           --------->YAB1    <---------ANAC55(1)            --------->AHL20(2)                  -----     <---------TOE2(3)       --------->ANAC55(2)<---------CCA1(2)  --------->ANAC46             -----  <------ZmHOX2a(2)     <---------ICU4   <---------ARR11(3) <---------AHL20(2)                  <----   atggatcaaggattaatagttgtagataattacgtaaatacataatcttcgtctcttctcatttaaactacgccattcaaaaatcgatgactaagaacag  5526900            <---------At4g35610            <---------ATERF1(1)            <------NtERF2            --------->At4g35610  --------->LBD16                                       --------->ANAC58  >>>>>>>>>>>>>>>>>LFY                    -------->P<---------ALFIN1  ------>NtERF2                           ------>MYB83<---------ALFIN1         <-----------GT1 --------->ANAC58         <---------At4g35610       --------->AtMYB61    <<<<<<<<<<WRKY43 --------->ANAC58         <------NtERF2<---------ANAC58 --------->ANAC58 <<<<<<<<<<WRKY26 --------->ANAC46         --------->At4g35610      --------->ANAC46--------->ATHB51 -----------------AGL1  <---------WRKY38(1) --------->AtMYB61      --------->ATHB12 ---->ZAT2<---------RAP2.6(2)     <---------ICU4 --------->ANAC46 <---------YAB1 ---->At4g35610         <---------WRKY45  ------>MYB46(1)         --------->ICU4                ----- -----At4g35610   ------>ZmHOX2a(1)    <---------ANAC58 --------->ANAC46 <<<<<<<<<<WRKY38      <-----   cttccgccattggccgcttcctatagtcagcgttcaacattgcctaccaaaacaccacacgcagagacattattggtcaaattaccaaaactttccaaac  5527000        --------->WRKY12                                             <-----------GT1        --------->ZAT14                                          <---------YAB1        <---------ZAT18                                       <----------DOF2        --------->WRKY38(1)                                <-----------GT1      <---------At4g35610                              <---------RVE1(1)      --------->At4g35610                          <---------HSFB2a(2)                <----------DOF2 ---->YAB1       --------->YAB1                    --------->HSFB2a(2)<---------At5g28300           - ----ATHB12     <---------YAB1           ------>ZmHOX2a(1) <---------AHL20(2)      <-----------GT1<--   atgaaatcagttgactctatcataagcgttctcagcatttctcctccatgcttctcgatattttcttttcattaccgtttccatttaactttgatcagag  5527100  Previous    Next  AGI:  At5g16800.1    Description:  GCN5-related N-acetyltransferase (GNAT) family protein. similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT3G02980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62165.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 5524382    to: 5526566    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16810.1    Description:  ATP binding / protein kinase. similar to unnamed protein product [Vitis vinifera] (GB:CAO62166.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 5526745    to: 5529933    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version