Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->ANAC58              <---------ARR14(2)                                                  --------->ANAC58   ----------->GT1                                                   --------->ANAC46  --------->DAG2              <---------STY1(2)                      --------->ANAC58  <---------TOE1(3)       --------->STY1(2)                          --------->ANAC58  <---------------AtSPL8  <---------STY1(2)                   --------->ANAC46  ---------->DOF2     -  --------->MYB59 ------>ZmHOX2a(1)                         --------->MYB52(1) --------->WRKY18(1)<--  <---------TOE2(3)  ------->TEIL     --------->YAB1    <------ZmHOX2a(1)     <-----------HVH21   --- --LBD16      --------->ARR14(2)   --------->YAB1<----------DOF2   --------->MYB52(1)          <-----   aaataaggtaaaatcaaatcctgaatctagctagctataaacatattcagactttggaggataaacggaaaacggaacaaggtcaagcgattcgaaattc  5521900                            ----------->GT1                                       <---------ARR11(3)             --------->ANAC58        ---------->DOF2                           <---------HSFB2a(2)     ---------->DOF2        --------->ANAC58                                --------->ZAT6         <- ---------->GT1             --------->ANAC58                             <-----------GT1 --------->TOE1(3) -------At4g35610    ----------->RAV1(2)            <-------TEIL <---------ARR14(2)      --------->TOE2(3) ------>At4g35610    --------->At4g35610        <---------TOE2(3)--------->ARR14(2)<------ZmHOX2a(2) --TEIL      --------->ANAC58      <---------YAB1  <--------P  <---------YAB1  --------->HSFB2a(2)---   atcggaaaaaagaagaagcaaacatctgaaacgaaatatcaaagaaaacaaaggttgatcaaattccgattcgaattacctctagatcaaaccttcaatg  5522000                  ==================================HOX2a_HOX2a                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                 ===================================HOX2a_HOX2a                 --------->DEAR3(2)                --------->ARR14(2)            <---------LBD16                       <---------HSFB2a(1)          --------->ARR14(2)                      --------->HSFB2a(1)                  --------->DEAR3(1)          <---------ARR14(2)                      <---------HSFC1(2)                  --------->DEAR3(2)          --------->KAN4(2)                  <------ZmHOX2a(1)                     --------->ZAT18         <---------KAN4(1)           <---------ICU4                             --------->ANAC58   <-         --------->KAN4(1)     --------->At4g35610--------->HSFC1(2)  --------->AHL20(2)           -- --------------AtSPL8     ---------->DOF2 <-----------RAV1(2)     <---------ZAT6--------->ANAC58   <- ------->DOF2   <---------ARR14(2)   <---------GLK1(2)  --------->LBD16       ---------->DOF2  ------   gaaagtactgaatattcggatcgacgaacaaagagctcagaattgcaggagaaatttccgagggtttagagataaattgcgaaagcacaccgacgaatag  5522100                                                                             --------->At4g35610                          ------->GAMYB                                  --------->MYB52(1)  ------>ZmHOX2a(2)                        --------->At4g35610                         <---------bZIP60(1)     <------ZmHOX2a(2)                    --------->ANAC58                                --------->bZIP60(1) --------->SPL7                    --------->ANAC58                                <---------ETT(2)   ------>NtERF2                    ------>MYB46(1)                                 <----------ID1    --------->DEAR3(1)            ---------->DOF2                                      ----------->TGA1     <---------SPL7 ----------------------TaNAC69(2)                                ----------->HVH21  <---------LBD16 ------->MYB59      ------>MYB83                               --------->At4g35610  --------->LBD16 --------TOE2(3)--------->ARR11(3)                             <---------At4g35610  --------->At4g35610 --->YAB1 --------->ARR11(3)             ---------->DOF2       --------->CCA1(2)--------->MYB52(1)   taaggtttagaagataaagacctagcaactgcgaagaatttagaaaagaatgcttcaaacgagagagatgacgacaaacagcaaaccgcggacgatcgca  5522200                                                                              <---------ZAT14                                                                              --------->ZAT18                                                                              --------->ZAT14                                                                           <---------ANAC55(1)                                                                           <---------ANAC55(2)                                                                           <---------ANAC46                                                                           <---------ANAC58                                                                           --------->ANAC55(2)                                                                           <---------ANAC58                                                                          <-------TEIL                                                                       --------->CCA1(2)                                                                      --------->ARR14(2)              --------->CCA1(2)             <------ZmHOX2a(1)         <---------ARR14(2)           --         ---------->DOF2           <---------ANAC46                   <---------ARR11(3) <---------AHL20(1)     --------->LBD16              <------NtERF2              *TSS     --------->ARR11(3) --------->AHL20(1)    --------->DEAR3(1)            <-----------------------TaNAC69(2)----------->ARR10   <---------AHL20(2)    <---------ANAC46            <---------DEAR3(1)        --------------->AGL15       <-----------TBP --------->ANAC46            <-----------RAV1(1)          <---------------AGL15   ----------->GT1<---   aactcgccgtggaaagagacggagagactctctggtggcgaagagaggagaacgattttgcaaaatagagaagatatacgtgtactgtatatatattagt  5522300                                                                                      ------>MYB46(1)                                                                                      ------>MYB83                                                                                    <---------MYB59                                                                                    <---------MYB46(2)                                         <------MYB83--------->HSFB2a(2)      --------->YAB1                                         <------MYB46(1)                      <---------ICU4                                <---------ARR11(3)   <---------HSFB2a(2)      -------->ATHB1                        ----------->GT1  <---------DEAR3(2)                   <--------HAHB4                      --------->SPL7     <---------MYB46(3)                  <---------ATHB12       --------->ANAC58<---------ANAC46 <---------DREB2C(2)  <---------MYB52(1)     <---------------AGL15       --------->ANAC58<---------ANAC55(2)<-------GAMYB     <---------MYB52(1)--------->ATHB12     ---------->DOF2  <---------LBD16   <---------DEAR3(1) ----------->GT1  ------->TEIL --------->GT1      <---------SPL7--------->TOE2(3) <---------LBD16   ------>ZmHOX2a(1) ------LBD16<---------GLK1(2)   --------->ARR11(3)<-----------GT1 <-----------GT1  ----------------->AGL1   ccggtttaaaagcaaattctttggtacgggaataaatcttagtcggttgaattttctggaccggttattttcctgatgaatcattaccaaacttggttta  5522400                                                                     <---------YAB1                                                                    <---------AHL20(1)                                                                   --------->ATHB51                                                                   --------->AHL20(2)                                                                  --------->ICU4                                                                  <---------MYB52(1)                                                            ------>ZmHOX2a(2)                                                           --------->CCA1(2)                                                          <---------AGP1                                                          --------->AGP1                                                          <-----------ARR10                                                          --------->ARR11(3)                                                          <---------ARR14(2)                  ------>ZmHOX2a(1)                       <---------ARR11(3)                  ----------->HVH21                       <---------ARR14(3)                <---------At4g35610                       --------->ARR14(3)                ----------->RAV1(2)                       --------->ARR14(2)          ----------->GT1           <---------DAG2      <-------TEIL             ----------->ARR10        --------->TOE2(2)           <----------DOF2    <-----------HVH21     <---------HSFB2a(2)          --------->TOE1(2)        <-----------GT1     --------->LBD16         --------->HSFB2a(2)<---------AHL20(2)    --------->AHL20(2)    <---------LBD16 ------>ZmHOX2a(1)<------ZmHOX2a(2)   <---------ARR14(2)    <---------AHL20(2) <----------DOF2    ========================HOX2a_HOX2a  ------->TEIL   --------->AHL20(2) <---------DAG2      =========================HOX2a_HOX2a --------->ARR14(2)   gtcaaataaatcactttctcctgacctttccggttcacatagtcctcaaaacctcgagaagatctgccattattttttttgaatctgcgagttaaaatga  5522500                 --------->YAB1          ------>ZmHOX2a(1)                                                          <---------ATHB12         --------->TOE2(3)                                              --------->GLK1(2)      <---------ARR14(2)                                               --------->ARR14(2)      --------->ARR14(2)                                               <---------ARR14(2)           <     <---------CCA1(2)      <---------TOE2(3)                          <---------GLK1(2)      -------     <---------GLK1(1)   --------->ICU4                     <---------AHL20(2)     --------->WOX13(1)  <-------TEIL  <---------YAB1           -------->P         --------->AHL20(2)   <---------YAB1 -----   aacatacatatccttattttcatagcaattttggttatgaggcaaccagaagaaaccagaaatttataaaacagattcttcttatcaatgaaaggtttgt  5522600                                                                        --------->At4g35610                                                                        <---------At4g35610                                                                    <-----------HVH21                                                                 ------>NtERF2                               <---------TOE1(3)                --------->ANAC46                               <---------YAB1                  --------->At4g35610                               ----------->ARR10               <---------At4g35610                             --------------->AGL15           ---------->CDC5                <-------- ----------DOF2      ---------->DOF2                       <----------DOF2                  --------- -->MYB52(2)     <----------ID1<---------TOE2(3)          <---------ANAC58           ------>ZmHOX2a(1) ----->ID1     <------ZmHOX2a(1)      <------ZmHOX2a(1)   <---------ANAC58 --------->At5g28300      -   ttctttagcattcaagaggaagacaaagttgctaagattaggagctaatcgatggacatggcttcagcgccatcagcggtaatgttcctctgcatttctt  5522700                                              --------->AtMYB61  --------->ZAT14               ------>ZmHOX2a(1)                           <---------TOE2(3) --------->AtMYB61            ----------->RAV1(2)                           --------->DAG2       ---- -ARR14(2)                    --------->At4g35610      ---------->DOF2    ---------->DOF2<---------At4g35610 >ARR14(2)          ------>ZmHOX2a(1)      <---------ALFIN1      --------->ANAC46        --------->At4g35610 -------->ANAC46    >>>>>>>>>>>>>>>>>LFY  --------->MYB46(3)   <-----------GT1     <------ZmHOX2a(1)-   ccaccatactcttctgttcatcctccattgtctcctgcaactcatccacctatacataaaagttttcacaaaaccaaaaaggttaggatttagctgtaaa  5522800  Previous    Next  AGI:  At5g16780.1    Description:  SART-1 family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70196.1); contains InterPro domain SART-1 protein (InterPro:IPR005011) Range:  from: 5517493    to: 5522261    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16790.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02950.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96424.1); contains InterPro domain Protein of unknown function DUF783 (InterPro:IPR008501) Range:  from: 5522498    to: 5523966    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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