Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ARR14(2)      --------->LBD16     <---------ANAC46     --------->DEAR3(1)   --------->ABI4(1)   ------>NtERF2  ------->GAMYB  --------->DREB2C(2)  <---------ALFIN1                      --------->ARR11(3)  --------->DEAR3(1)                    <---------ARR11(3)                 <---------ZAT18   -------- --------->MYB46(3)              --------->At4g35610                     <------NtERF2       -------- --------ALFIN1          ------>ZmHOX2a(2)                              ------>NtERF2       <-------- ------->AtMYB61        <------ZmHOX2a(2)         <---------TOE2(3)    <---------DEAR3(1)  --------->SPL7 -------ABI4(2)        --------->ARR11(3)      --------->DOF5.7(2)    --------->RAP2.6(3) <---------MYB52(1) ------>MYB46(3)       <---------ARR11(3)     <----------DOF2   <-----------HVH21        <---------SPL7 --ZmHOX2a(1)   <----------DOF2  ----------->RAV1(2)       <------ZmHOX2a(1)       <----------DOF2 ->DOF2   --------->ARR14(2)  <---------At4g35610<---------DOF5.7(2)--------->ANAC46     <-----------HVH21   accaccgccgtagaactgctttagagatcgtgagcacctgtagttcttctttaacgaatgaggagccatcacgacggcgaactctctttcccgtccggtg  5509300                                                                          <-----------GT1                                                                 <---------ZAT18                                                               --------->ZAT2<---------ANAC58                    --------->LBD16                            --------->At4g35610                   <---------ANAC58           *TSS             <---------ZAT2<---------ANAC58 <------                   <---------ANAC46     <------NtERF2          <---------At4g35610 <----------DOF2 ->LBD16           <---------ANAC58    --------->LBD16      <---------At4g35610  ---------->ID1 ----- ->At4g35610   <----------DOF2       <---------LBD16<---------TOE2(3) <-----------TBP      ---------- -MYB46(3)  <------ZmHOX2a(1)--------->MYB52(1)     <---------TOE1(3)<----------DOF2      <----------   aagagaacgttgaaggactttgcgcgaagaaaaacggtagccggagaaagaattagggtttaagcagctcgcttttataccttgtctttttttttcaatt  5509400                     ------>MYB46(1)                                                                -                     ------>MYB83                                                                <---                   --------------->AGL15                                                         ----               <---------SPL7                                                                    <---              --------->ANAC55(2)                                                                ----              <---------ANAC58                         --------->CCA1(2)                         <---              <---------ANAC58                         <------ZmHOX2a(2)                         ----              <---------ANAC55(2) <---------ANAC58    <---------ARR11(3)                        -----    ------>MYB46(1)<---------------AGL15   <---------DEAR3(1)                                   <----    ------>MYB83   <---------MYB59<---------ANAC46    --------->AGP1                            -----  <---------MYB59------->TEIL     <---------ANAC58    --------->ARR11(3)                      ------- ------CBF   --------------->AtSPL8     <---------RAP2.6(2)                        --------->ATHB12-- ---------->AtSPL8----------------->AGL3<---------ANAC46                          <---------AHL20(2)< -->CBF      --------------->AtSPL3     <---------ANAC58                          <---------YAB1<---- -GT1        <---------------AtSPL8     <---------ANAC58     --------->AHL20(2)   --------->AHL20(2)-   ggtaccaaattttaagacgtaccaaattaagcgtttgcgtttgcgtctgcgtttgagatccaaatatttaagcccatgaactatataattggcccataat  5509500     --------->ANAC58                                               <-------MYC2     --------->ANAC58                                               ------->MYC2  <---------YAB1                                                    <-------MYC3 ------->HAHB4                                                      ------->MYC4 -----ATHB1                                                         <-------MYC4 ---->HAHB4                                                         ------->MYC3 ------ICU4                                                        <---------ANAC55(2) ----->ATHB51                                                      <---------O2 -----HAHB4                                                        --------->O2 ----->YAB1                                                --------->ANAC58 ---->ICU4 --------->YAB1                                  --------->ANAC46     --------->ANAC58 -----ATHB51     --------->DEAR3(1)                 <----------DOF2--------->ANAC55(2)             -- ---->AHL20(2)   ------->GAMYB                      =========================bZIP_DOF              -- -->YAB1   --------->ANAC58     =============================================bZIP_DOF              -- ------->ICU4   --------->DEAR3(2)                ------>ZmHOX2a(1)<---------TGA1a        ------->TEIL ---------ICU4  <------------AtMYB77          ----------------------->TaNAC69(2)--------->ANAC58   -- -----YAB1 --------->ANAC58     ---------->DOF2---------->ID1      --------->TGA1a <---------ALFIN1-- -------->YAB1  --------->MYB46(3)  --------->ARR11(3)     --------->ANAC58     --------->ANAC46   <-   aattatgaagcaatcgcaaccgtccatctaatgaaaaagacctagactcgtcctctttcgcacgctaacacgtgttcaacattcgccacttgcatcttca  5509600                        --------->REM1(2)                      <-------MYC3                      <-------MYC2                      ------->MYC2                      <-------MYC4                                           *TSS                      ------->MYC4                                   <---------ZAT18   ------------>CBF   ------->MYC3                                   --------->ZAT18  ------->TEIL       <---------ANAC55(2)                         --------->DAG2        <-----------GT1 ------->ANAC55(1)   --------->O2                               ---------->DOF2      <---------DAG2xx ------->ANAC58      <---------O2                           --------->HSFB2a(2)      <----------DOF2 ------->ANAC58      --------->TGA1a                        --------->HSFC1(1)    ------>MYB83     -- ------->ANAC46      <---------TGA1a                        <---------HSFB2a(2)   ------>MYB46(1)  == ------->ANAC55(2)  ------------>OsbHLH66                   <---------HSFC1(1)  <---------MYB59<----- --------ANAC55(2) <---------ALFIN1             <---------MYB52(1) <---------------AtSPL8<---------YAB1   cacgtaccaatattcgattccacacgtgtacaacattcccttctctctctgttatttcatctctagaaaagggcacaaaaaaccaaactttacgatttct  5509700              --------->GLK1(2)                                 <---------GLK1(2)      <---------GLK1(2)                                     --------->REM1(2)   <---------HSFB2a(2)                                    --------->LBD16   --------->HSFB2a(2)   ------>ZmHOX2a(2)               <---------ANAC55(1)  <---------LBD16      <---------ARR11(3)                <---------ANAC58 xxxxxxxxxxxxxx>smallRNA(s)                              <---------ANAC55(2) ---->ZmHOX2a(1)       --------->ARR11(3)                <---------ANAC46 ===============================HOX2a_HOX2a              <---------ANAC58             ---------->DOF2 ------GT1   <---------GLK1(2)                          <-----------------------TaNAC69(2)     ------   cctctctggaatctcgattctgtatgatctcttcgatctaatcgagtcttctaaacgttccgtgtagaatttcaaatctagggtttgctaaagcttgaac  5509800               --------->HSFB2a(2)               <---------HSFB2a(2)                                                             ------        <----------DOF2                        <-----------GT1                             <---------   <-----------GT1                --------->LBD16 ----------------->AG  --------->YAB1   --------->ARR11(3) <---------ANAC58                 ------>ZmHOX2a(1)             --------->TOE2(2)        <---------ARR11(3) <---------ANAC58                <---------LBD16---------->ID1  --------->TOE1(2)    ---------->DOF2 ->TEIL<---------DAG2      <---------YAB1  ------->TEIL      <-----------GT1        ------->GAMYB <--   ctttcttacccttttctctcgaagaggttttgattcctgggcatgaatttttccctaatcttgttaccttcgaagcataacaacaacgaaagatgtcaga  5509900                                         --------->ANAC58                                         --------->ANAC58                           --------->ANAC58            <---------GLK1(2)        ------>NtERF2            --------->ARR11(3)      --------->DEAR3(1)                                --------->ANAC46            <---------ARR11(3)   --------->ANAC46                                --------->ANAC46       <------ZmHOX2a(1)   <---------ANAC55(2)                  --------->HSFB2a(1)  --------->ANAC58     --------->LBD16       --------->ANAC55(2)                 -------->P        --------->ANAC58    <---------LBD16      --------->CCA1(2)                     ------>MYB46(1)   --------->ANAC58 --->At4g35610          <---------ARR14(2)                     ------>MYB83------>ZmHOX2a(2) --HVH21---------->DOF2 --------->ARR14(2)                  --------->MYB46(3) --------->ZAT6 -----TEIL----------->ARR10--------->ANAC58             <-------TEIL <----------DOF2 --------->ANAC58   ttcaatccaggaaagatacttagttggatacgcactcgcagccaagaaacagcatagtttcatccaaccttctttgatcgaacactcaaggcaacgaggc  5510000                                                                                                -----                                                                                              -------                               <---------MYB46(3)                                             <------                      --------->ANAC58                                                        -------                   --------->TOE1(2)                                                          <------                  ------>ZmHOX2a(2)                                                           <------       --------->WRKY18(1)     <-----------RAV1(1)                    <----------DOF2         -------   ------>ZmHOX2a(2)  --------->ANAC58                             --------->ANAC58       <------ZmHOX2a(1) <---------AGP1   --------->DEAR3(2)                 <---------WOX13(1)      <---------ANAC46<------- --------->ARR11(3)----------->HVH21               --------->ATHB12--------->ANAC58      ----------->GT1   attgatctggtcaagcttgatccgacgaaatcgttgttggagcaagggaagcttgattgcataatccacaagctttacgatgtgtattggaaggagaatc  5510100         --------->HSFB2a(2)         <---------HSFB2a(2)        <---------ANAC46 ---->YAB1 -->ARR14(2) -----ARR10 -->GLK1(2) ---ARR11(3)                                <---------ANAC58 ---ARR14(2)                                ----------->RAV1(2)                         <---------At4g35610 -->ARR11(3)                   ------>ZmHOX2a(1)                                   <---------ANAC58 --GLK1(2)            ------>ZmHOX2a(1)     <---------ANAC58    --------->ZAT18    <---------ANAC58   ttcatgagtttcgcgagaaatgtcctggtgttcctgtaatcgatttgcctgaggctatcgagcgattgcacaatagggtttcgatgcttgaggtgataac  5510200  Previous    Next  AGI:  At5g16750.1    Description:  TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G21540.1); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62153.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76090.1); similar to hypothetical protein OsI_016603 [Oryza sativa (indica cultivar-group)] (GB:EAY95370.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains Inte Range:  from: 5504349    to: 5509346    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16760.1    Description:  inositol 1,3,4-trisphosphate 5/6-kinase. Identical to Inositol-tetrakisphosphate 1-kinase 1 (ITPK1) [Arabidopsis Thaliana] (GB:Q9SBA5;GB:O81633); similar to inositol 1,3,4-trisphosphate 5/6-kinase family protein [Arabidopsis thaliana] (TAIR:AT4G08170.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62154.1); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427); contains InterPro domain Inositol 1, 3, 4-trisphosphate 56-kinase; (InterPro:IPR008656) Range:  from: 5509677    to: 5511235    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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