Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ANAC46             --------->ANAC58             --------->ANAC58      <---------ANAC58      --------->ALFIN1      <---------ANAC46                             <---------ICU4      <---------ANAC58                             --------->ATHB12     <-------TEIL                                 <---------YAB1   --------->ARR14(2)                             <---------ATHB12                             ------  --------->At4g35610               <---------ANAC58                                           <-----  <---------At4g35610               <---------ANAC58  ---------->DOF2                       --------- -----------RAV1(2)               ------>ZmHOX2a(1)<--------HAHB4                        ----------->RAV1(1) -------->HSFB2a(2)     ----------->HVH21         --------->ICU4                      <------ZmHOX2a(1) ---------HSFB2a(2)    <-----------HVH21     <---------ZAT2                     --------->AtMYB61 --- --->ZmHOX2a(1)       --------->ANAC46 <-----------HVH21                     --------->ANAC46 -------   ctccagatgcgtggcaagccattcccatcacaggtccttcgtgtccctgctcatcattaagcacaaattatagactaaaacaccacaaggacaacaataa  5508900                                                                       ------>MYB83                                                                  <-----------GT1                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                            --------->AHL20(2) --->YAB1                           ------>MYB46(1)        --------->AHL20(1) ----ICU4               ---------->DOF2--------->AHL20(2)  <---------AHL20(1) >YAB1          --------->AHL20(2)  ------>MYB83  --------------->AtSPL8                    <-------- ------>YAB1    --------->AHL20(1)--------->TOE2(3)        <---------ARR11(3)               <-------- -->ICU4        <---------AHL20(2)<---------MYB59<---------MYB52(1)    ------>MYB46(1)------->TEIL   tcatatttagaaatcaaattttttaaaaaagagaaacctaattcaatatcagttagtacaatatatatataccttccaagagcgaatgcatttcaaggtt  5509000                                                                                           --------->ANAC58                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                --------->GLK1(1)       ---------->DOF2                           <---------CCA1(2)               <---------ARR14(2)--------->ZAT2                                   <---------ARR14(1)  <---------ARR14(2)             --------->At4g35610      <------ZmHOX2a(1)     <---------ANAC58  --------->ARR14(2)             <---------ZAT2        <---------ICU4           <---------ANAC58    < -TOE1(3)      --------->ARR14(2)<---------At4g35610--------->YAB1   ---------->DOF2       --------->ANAC58 -TOE2(3)  <---------LBD16      ----------->RAV1(1)<---------YAB1 --------->At4g35610 --------->ANAC46   tccaaatcccaaactcggatttgtctactatgtccagcagagaaaaggagcttatcatcaggactaagagctaaagcagtgagcgtatccgactcgcctt  5509100                                                     <-----------RAV1(2)                                               --------->TGA2(2)                                              <-----------TGA1                                              <-----------HVH21                                             --------->bZIP60(2)                                             <---------bZIP60(1)                                             <---------bZIP60(2)                                             --------->ANAC55(2)                                             <---------ANAC55(2)                                             --------->ANAC46                                             --------->bZIP60(1)                                             <---------TGA2(1)                                             ==================================bZIP_DOF                                             <---------ANAC58                                             --------->O2  <------NtERF2                                             <---------O2  <-----------RAV1(2)                                             --------->TGA2(1)                                             <---------TGA1a                                             --------->TGA1a                <-----------HVH21     <--                                             <---------ANAC58             --------->MYB46(3)    =====                                             <<<<<<<<<<HY5 --------->ATERF1(1)                  <----                   <---------ARR14(2)       <-----------STF1 --------->ANAC58                   =====                   ------->TEIL             ----------->STF1 --------->ANAC58   --------->At4g35610--       <---------GLK1(1)       --------->MYB52(1)  <---------ALFIN1 ---------->DOF2         ---------      >>>>>>>>>>GATA-1 --------->LBD16     <---------TGA2(2)--------->DEAR3(1)  <---------At4g35610<- ---------ATHB12   --------->ARR14(2)     ----------->TGA1<---------ATERF1(1) <-----------RAV1(2) ---   caatcgtggatttcactgatgaatccgtagaatcaacgatgttaatgacgtcaccacaggcgcaggcgatgaaagaaccatcagatgaaacaatgaaagg  5509200          <---------ARR14(2)      --------->LBD16     --------->DEAR3(1)     <---------ANAC46   ------>NtERF2   --------->ABI4(1)  --------->DEAR3(1)  ------->GAMYB  <---------ALFIN1                      <---------ARR11(3)  --------->DREB2C(2)                   --------->ARR11(3) --------->MYB46(3)              --------->At4g35610 -------ABI4(2)          ------>ZmHOX2a(2)                                 <---------ZAT18   -------- ===============================HOX2a_HOX2a                              <------NtERF2       -------- --ZmHOX2a(1)           <------ZmHOX2a(2)                               ------>NtERF2       <-------- ==============================HOX2a_HOX2a        <---------TOE2(3)    <---------DEAR3(1)  --------->SPL7 ------->AtMYB61       --------->ARR11(3)      --------->DOF5.7(2)    --------->RAP2.6(3) <---------MYB52(1) ->DOF2   --------->ARR14(2)  <---------At4g35610<---------DOF5.7(2)--------->ANAC46     <-----------HVH21 --------ALFIN1        <---------ARR11(3)     <----------DOF2   <-----------HVH21        <---------SPL7 ------>MYB46(3)<----------DOF2  ----------->RAV1(2)       <------ZmHOX2a(1)       <----------DOF2   accaccgccgtagaactgctttagagatcgtgagcacctgtagttcttctttaacgaatgaggagccatcacgacggcgaactctctttcccgtccggtg  5509300                                                                          <-----------GT1                                                                 <---------ZAT18                                                               --------->ZAT2<---------ANAC58                    --------->LBD16                            <---------At4g35610                   <---------ANAC58           *TSS             <---------ZAT2<---------ANAC58 <------                   <---------ANAC58     <------NtERF2          --------->At4g35610 <----------DOF2 ->LBD16           <---------ANAC46    --------->LBD16      <---------At4g35610  ---------->ID1 ----- ->At4g35610   <----------DOF2       <---------LBD16<---------TOE2(3) <-----------TBP      ---------- -MYB46(3)  <------ZmHOX2a(1)--------->MYB52(1)     <---------TOE1(3)<----------DOF2      <----------   aagagaacgttgaaggactttgcgcgaagaaaaacggtagccggagaaagaattagggtttaagcagctcgcttttataccttgtctttttttttcaatt  5509400                     ------>MYB46(1)                                                                <                     ------>MYB83                                                                <---                   <---------MYB59                                                               ----               <---------SPL7                                                                    ----              <---------ANAC58                                                                   <---              <---------ANAC55(2)                      --------->CCA1(2)                         <---              --------->ANAC55(2) <---------ANAC58     <------ZmHOX2a(2)                         ----              <---------ANAC58    <---------ANAC58    <---------ARR11(3)                        <----    ------>MYB83   <---------------AGL15              --------->ARR11(3)                        <----    ------>MYB46(1)--------------->AGL15   <---------DEAR3(1)                                   -----  <---------MYB59------->TEIL     <---------ANAC46    --------->AGP1                          ------- ------CBF   --------------->AtSPL8     <---------ANAC58                           --------->ATHB12-- ---------->AtSPL8----------------->AGL3<---------ANAC58                          <---------AHL20(2)- -->CBF      --------------->AtSPL3     <---------ANAC46                          --------->AHL20(2)- -GT1        <---------------AtSPL8     <---------RAP2.6(2)  --------->AHL20(2)   <---------YAB1-----   ggtaccaaattttaagacgtaccaaattaagcgtttgcgtttgcgtctgcgtttgagatccaaatatttaagcccatgaactatataattggcccataat  5509500     --------->ANAC58                                               ------->MYC4     --------->ANAC58                                               ------->MYC3  <---------YAB1                                                    <-------MYC2 ---------ICU4                                                      ------->MYC2 -----ATHB1                                                         <-------MYC4 ---->HAHB4                                                         <-------MYC3 ----->ATHB51                                                      --------->O2 ------ICU4                                                        --------->ANAC55(2) -----HAHB4                                                        <---------TGA1a ----->YAB1                                                --------->ANAC46 -----YAB1 --------->ANAC58                                --------->ANAC58 -----ATHB51     ------->GAMYB                      <----------DOF2--------->TGA1a <---------ALFIN1-- ---->ICU4 --------->YAB1       =============================================bZIP_DOF              <- -->YAB1   --------->ANAC58     ---------->DOF2     =========================bZIP_DOF              -- ------->ICU4    --------->DEAR3(1)               ------>ZmHOX2a(1)<---------O2 --------->ANAC46   -- -------->YAB1  --------->MYB46(3)             ---------->ID1      <---------ANAC55(2)    ------->TEIL ------->HAHB4  --------->DEAR3(2)            ----------------------->TaNAC69(2)--------->ANAC58   -- ---->AHL20(2)  <------------AtMYB77--------->ARR11(3)     --------->ANAC58     --------->ANAC58   --   aattatgaagcaatcgcaaccgtccatctaatgaaaaagacctagactcgtcctctttcgcacgctaacacgtgttcaacattcgccacttgcatcttca  5509600                        --------->REM1(2)                      ------->MYC2                      <-------MYC3                      ------->MYC4                      ------->MYC3                                           *TSS                      <-------MYC2                                   <---------ZAT18   ------------>CBF   <-------MYC4                                   --------->ZAT18  ------->TEIL       <---------TGA1a                             --------->DAG2        <-----------GT1 ------->ANAC55(2)   --------->TGA1a                            ---------->DOF2      <---------DAG2-- --------ANAC55(2)   --------->O2                           --------->HSFC1(1)       <----------DOF2 ------->ANAC55(1)   <---------O2                           --------->HSFB2a(2)   ------>MYB46(1)  xx ------->ANAC58      <---------ANAC55(2)                    <---------HSFB2a(2)   ------>MYB83     == ------->ANAC58     ------------>OsbHLH66                   <---------HSFC1(1)  <---------MYB59<----- ------->ANAC46    <---------ALFIN1             <---------MYB52(1) <---------------AtSPL8<---------YAB1   cacgtaccaatattcgattccacacgtgtacaacattcccttctctctctgttatttcatctctagaaaagggcacaaaaaaccaaactttacgatttct  5509700              --------->GLK1(2)                                 <---------GLK1(2)      <---------GLK1(2)                                     --------->REM1(2)   <---------HSFB2a(2)                                    --------->LBD16   --------->HSFB2a(2)   ------>ZmHOX2a(2)               <---------ANAC55(1)  <---------LBD16      --------->ARR11(3)                <---------ANAC58 ---->ZmHOX2a(1)       <---------ARR11(3)                <---------ANAC46 xxxxxxxxxxxxxx>smallRNA(s)                              <---------ANAC58 ===============================HOX2a_HOX2a              <---------ANAC55(2)          ---------->DOF2 ------GT1   <---------GLK1(2)                          <-----------------------TaNAC69(2)     ------   cctctctggaatctcgattctgtatgatctcttcgatctaatcgagtcttctaaacgttccgtgtagaatttcaaatctagggtttgctaaagcttgaac  5509800  Previous    Next  AGI:  At5g16750.1    Description:  TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G21540.1); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62153.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76090.1); similar to hypothetical protein OsI_016603 [Oryza sativa (indica cultivar-group)] (GB:EAY95370.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains Inte Range:  from: 5504349    to: 5509346    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16760.1    Description:  inositol 1,3,4-trisphosphate 5/6-kinase. Identical to Inositol-tetrakisphosphate 1-kinase 1 (ITPK1) [Arabidopsis Thaliana] (GB:Q9SBA5;GB:O81633); similar to inositol 1,3,4-trisphosphate 5/6-kinase family protein [Arabidopsis thaliana] (TAIR:AT4G08170.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62154.1); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427); contains InterPro domain Inositol 1, 3, 4-trisphosphate 56-kinase; (InterPro:IPR008656) Range:  from: 5509677    to: 5511235    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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