Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                              ----------->GT1       <                                                     <---------ICU4   --------->YAB1                -                                                  <---------ICU4      -------->HAHB4               <-                          --------->YAB1          --------->ATHB12    <---------ICU4               <-                          <---------ICU4<---------At4g35610<---------SPL7 --------->ARR11(3)       --                         <---------ATHB12         --------->YAB1     --------->ICU4                <- -----AHL20(2)         --------->WOX13(1)        <---------ATHB12    <---------YAB1       --------->AHL20(2) --->AHL20(2)      <---------TOE2(3)   <---------TOE1(3)  <---------ANAC46<---------ARR11(3)      <XX   aatcagagaagtttatgttttaagttaatcatgtatagcttaagcttataaatcattacgacgtatgaaaaatgattatcttgaaaatataagtaaatga  5502500         <------ZmHOX2a(1)        <---------YAB1   <---------ZAT6  <---------YAB1 ------->ATHB1 -------->ATHB51 ---------ICU4 -------->ATHB12 --------YAB1                                             --------->ANAC58 --------AHL20(2)                                         --------->ANAC58 ------->ICU4                                             --------->ANAC46 --------ATHB51                                       <-----------GT1 XXXXXXXXXXXXXXXXXXXMIR856   ----------->GT1   <-------TEIL   aattattgttaggattagcacatatatagtatagaaatatttccaaaaatgcatatttacaagaaaacaaaaaaaaaaacttggtataacacactcttgc  5502600                                                                                           <---------ICU4                                                                                          <---------YAB1                                                                                          --------->ICU4                                                                                        --------->YAB1       <---------ALFIN1                                                             <-------TEIL     ----------->RAV1(1)                                                        --------->ALFIN1 ------->MYC3             --------->YAB1                                      <---------ANAC58    --- <-------MYC3     <---------YAB1                                              <---------ANAC58 ------   tcatgtgcaacactctagttatgtttattcataccaagggatgttttcacagcaaaatagctccacaaatgtataaattgacttggtgcatcataattca  5502700                                                                               ----------->RAV1(1)                                                                            ------>NtERF2                                                                           --------->DEAR3(1)                                                                          --------->RAP2.3(1)                                                                          <------NtERF2                                                                          --------->ATERF1(1)                                                                         ------>NtERF2                                                                         <---------ATERF1(1)                                                                         --------->ABI4(1)                                                                        --------->RAP2.6(2)                                                                        --------->RAP2.3(2)                                                                        --------->DEAR3(1)                  --------->YAB1                                        --------->RAP2.3(3)          <---------SPL7                                               --------->RAP2.3(1)         <---------ANAC55(2)                                           <------NtERF2--------->AtMYB61         --------->ANAC55(2)                                           --------->ATERF1(1)         --------->ANAC58                                              --------->ERF1         <---------ANAC58                                              --------->ORA47(2)         --------->ANAC58    <---------ATHB12                          --------->DEAR4(2)        <-------TEIL        ------>MYB83                              <---------RAP2.3(1)     <------MYB83<---------ATHB12  <---------YAB1                     ------>NtERF2 --------->MYB46(3)     <------MYB46(1)        -------->P                                <---------DEAR4(2)    <---------------AtSPL3  ------>MYB46(1)                           <---------ATERF1(1)    --------->MYB111(1)    --------->MYB55(1)                        --------->ANAC58    --------->MYB59       <---------MYB111(2)                        --------->ANAC46 ------>MYB83 --    <---------------AtSPL8<---------MYB111(1)                        --------->DEAR3(1)     --------- ------>YAB1------->TEIL  --------->MYB46(3)                         --------->ANAC58 ------>MYB46(1) --->YAB1<---------ANAC58 <---------MYB46(2)   <---------ZAT14     <---------At4g35610-------->P  <--   taatattaggtacgtaccaatgagcataccaaccatgttgataacagagtgaagaaatgaactattttcagacgccgcctccaacaccaactctctaacc  5502800                                         --------->ANAC46                                         --------->AtLEC2                                         --------->ANAC58                                         --------->ANAC58     --------->LBD16                                        <-------MYC3          <---------ETT(1)                                        ------->MYC2          --------->ANAC46 ------->GAMYB                                        ------->MYC3         <---------HSFB2a(2)                                 ------>ZmHOX2a(1) >>>>>>>>>>MYB80 <---------YAB1                                --------->TOE2(3) --------->ANAC46 --------->ICU4      --------->ZAT6 ------->ARR14(2)            <-----------GT1----------->RAV1(1)------>NtERF2  <---------MYB52(2) -->HVH21              <----------DOF2  <-------MYC2--------->MYB46(3)        --------->MYB46(3) -------MYB52(1)  <---------ALFIN1   <---------ALFIN1        --------->HSFB2a(2)--------->MYB52(1)<--   ggtttttcatgctcacattcacaccctttattttcctcaacacatgcaacacaaaccatcgttcccgacatgattctacaacgaactgatcactagataa  5502900                                                                                 <---------ZAT18                                                                                 --------->ZAT14                                                                                 <---------ZAT14                                                                               --------->ANAC46                                                                            <-------TEIL                                                                           --------->CCA1(2)                                                                          --------->ARR14(2)                                                               <---------HSFB2a(2)     <---------ATHB12             <---------TOE2(3)                                 --------->HSFB2a(2) ------------>CBF         <------------CBF    <---------bZIP60(2)      ----------->GT1   ----------->ARR10       <---------------AGL15 <---------ANAC46      --------->ALFIN1    <------ZmHOX2a(1)          --- -------------AGL15  ------->TEIL         <------ZmHOX2a(1)<-----------TBP<---------ARR14(2)      <--   ccatataagctaattgaggtatgtatttgtgatgtgtaagagaaggagggagagtgttgttatttgtagaagaggagatacactgcacaatgaagaattt  5503000                                                                                         <-------GAMYB                                                                                        <------MYB83              ---------->DOF2                                                           <------MYB46(1)           --------->YAB1  <---------bZIP60(1)                                        <---------MYB52(1)          <---------YAB1   --------->bZIP60(1)                                       <-------GAMYB      <---------GLK1(2) <---------YAB1                                         <------MYB46(1) <-----    <---------YAB1    <---------ICU4                <---------MYB52(1)         <------MYB83    ------    <---------TOE2(3) --------->YAB1           --------->KAN4(2)         ---------->DOF2<---------MYB46(3) ------>AHL20(2)     <---------ATHB51     <---------ANAC46  ------------>CBF --------->ALFIN1 ------- -------AHL20(2)     --------->ICU4<------------CBF--------->TOE2(3)<------------CBF<-----------RAV1(1)   ttaaataagattatcaaaaagaaattatgacttcatacattgttttgtatattcgttagccttccaatagaattggaaagtgggttctgttggttattta  5503100                                                                       --------->TGA2(2)                                                                      <-----------HVH21                                                                      <-----------TGA1                                                                     --------->ANAC58                                                                     --------->ANAC46                                                                     --------->ANAC55(2)                                                   <-------TEIL      --------->ANAC55(1)                                                <---------HSFB2a(1)  --------->ANAC58 <---------HSFB2a(2)           <-----------GT1  --------->KAN4(1)   <-------TEIL                <---- ----AHL20(2)             --------->YAB1       <---------KAN4(2)   <-----------GT1         --------->YAB1 --->AHL20(2)         <------ZmHOX2a(1)  <---------LBD16       --------->AHL20(2)          <---------ICU4 -->AHL20(2)       <------ZmHOX2a(1)   ----------->HVH21--------->ANAC46                  <---------ATHB12   attctcgtagcatattagttaggaggaatcatattacacattcgacgggaatgttcatacaccatatatatacgtcatacattcttaagtgaatcatgac  5503200            ----------->GT1                                      <-----------GT1           >>>>>>>>>TBF1             <---------AHL20(2)  --------->MYB52(2)<---------HSFB2a(2)        >>>>>>>>>TBF1    <---------YAB1            <----------DOF2  <----------DOF2     --------->AHL20(2) -----------AGL15---------->DOF2    --------->AHL20(2) <---------MYB52(1)  --------->HSFB2a(2)    <--   atatatagaagaagaagaaaaaagactcttatagtatataaaatagtatacaactttgttagttttttttctttcttctagagttttgaattaaactagg  5503300                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           --------->YAB1                                                                                           <---------AHL20(2)                                                                                        <---------ICU4                                                                                       --------------                                                                                       --------->ICU4                                                                        <---------------AGL15                                                                        --------------->AGL15                                                                       <-----------------AGL2                                                                       <-----------------AGL3                                                                       <-----------------AG--------->AHL20(2)                                                                       ----------------->AGL2     <--                                                                       ----------------->AGL3     <--                                                                       ============================== -----TEIL        <-----------GT1         <---------YAB1               <-----------------AGL1<-------   ttgataagacaattccaaattaaccagtgccagagtttagaatattgatagagaacatgtttttgttagtatttctatttatgggaatactaattatatt  5503400  Previous    Next  AGI:  At5g16740.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT5G02170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45283.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 5501047    to: 5502859    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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