Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------WRKY12                                                           <-----------HVH21                                                          >>>>>>>>>>HY5                                                          <---------bZIP60(1)                                                          --------->O2                                                          <---------TGA1a                                                          --------->TGA1a                                                          <---------O2                                                          <---------TGA2(1)                                                          --------->bZIP60(1)                                                          <---------ANAC55(2)                                                          <---------ANAC46                                                          <---------bZIP60(2)                                                          --------->TGA2(1)                                                        <---------TGA2(2)                                                       ----------->HVH21                                                       <---------MYB52(1)                                                       ----------->TGA1                                                      <-----------HVH21                                                     <---------TGA1a                                                     --------->O2                                                     <---------O2                                                     --------->TGA1a     --------->At4g35610                           ------>NtERF2    --------->ANAC46                               --------->LBD16 ---ZmHOX2a(1)              <-----------HVH21     --------->DEAR3(1)                    ----------->GT1 ----TOE1(2)               =========================================bZIP_DOF       --------->ANAC58 >ANAC58                   <----------DOF2        --------->ANAC46                 --------->ANAC58 >ANAC46                --------->GLK1(2)        <---------LBD16                ------>ZmHOX2a(1) >ANAC58     <-------TEIL  ====================================bZIP_DOF        --------->TOE2(3)   gaacataagcagcgatacgttgagagactctttcactcgatagcaataaactccgccgtgacgtcaaggggagatggtcttcctcaaggaatgtaaaatc  5447900                      <------MYB46(1)                      <------MYB83                     --------->MYB46(2)                     <---------TOE1(2)                     --------->MYB59                     --------->MYB111(1)                    <--------P                    <---------MYB55(1)                  <------MYB83                  <------MYB46(1)                                        <-------TEIL                  <---------MYB46(3)                                 --------->DAG2             --------->ARR11(3)                                     ---------->DOF2    --------->At4g35610  <-------TEIL                             <------ZmHOX2a(1)               <--   agactccgatgaagagatgttggtaggttcatggcacatcttatacatttgaattagagtaatacagaggaaaagtacatggagactgaagaaaattgct  5448000                               --------->REM1(2)                               <---------ARR14(2)                            <---------ANAC46                            <---------ANAC55(1)                            <---------ANAC58                --------->ARR14(2)       --------->GLK1(1)    <---------ANAC55(2)       <---------GLK1(1)    <---------ANAC58                                            <------ZmHOX2a(1)      <---------ARR11(3)   <-----------------------TaNAC69(2)            <---------MYB46(3) -------YAB1    <---------ARR14(2)        ---------->DOF2                --------->MYB52(2)       ---   ataatcgagatttctccaaatttgctaattgcgtatagagctacaaaagcgaattagataataagagagaagggtttgttaagaaggtaaggagaatgaa  5448100          <----------DOF2     --------->HSFB2a(1)                  <---------GLK1(2)     <---------HSFB2a(1)           --------->GLK1(2)                                       <---------DAG2   <---------GLK1(2)              <---------GLK1(2)     ----------->GT1           <-----------HVH21 ------->DOF2                   ----------->ARR10      --------->LBD16      <----------DOF2<---------   gaaaggaatctcctttggacatgaacacaaggagaagaatctcagattgtcgaaaccctggtaataaacatgaagaagcttttgtgtcactcacttttat  5448200                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                                 <----------TaMYB80                                                     <---------MYB59                                                   --------->ARR11(3)        --------->DAG2                             <---------ARR11(3)                               -    --------->AHL20(2)                   ----------->HVH21    <---------At4g35610          --------->ANAC58    --------->YAB1                     ----------->GT1    --------->TOE2(3)                --------->ANAC58 -DOF2 ---------->DOF2          --------->YAB1    --------->GLK1(1)                        <xxxxxxxxx   gaacaataaaaaagttgtttttagccaaattgaaacataaccagtgaaacggagaccttacctcagcatattcgatgaaacactgaaattgagacgctct  5448300                *TSS                ---------->DOF2                   --------->YAB1     <-----------GT1                   <---------ANAC58                                         -----   <---------WOX13(1)                  <---------ANAC58                                         <---- -------->ICU4<---------TOE2(3)        <---------ANAC46                 <------ZmHOX2a(1)       <---- xxxxxxxsmallRNA(s)       <---------MYB52(1)     <---------YAB1      <-----------RAV1(2) ----------->GT1   tactgattaacaagttaagaaagaaatcgttttttttttttgtgtgtgtttatcatcgaaacagaggggaaacaggagggagcgaagagaaaggttattt  5448400                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                             --------                                                                                          --------->LBD16                                                                                          <------NtERF2                                                                                          ------>NtERF2                               ---------->DOF2                                           --------->ANAC46                               --------->MYB52(1)                                        --------->DEAR3(1)                   --------->AHL20(2)                                                    --------->RAP2.3(2)             ------------>CBF--------->TOE2(3)                    ---------->DOF2       --------->RAP2.3(1) ---->AHL20(2)    --------->AHL20(2)                             --------->AHL20(2)     <---------LBD16 -----AHL20(1)    --------->YAB1---------->DOF2        --------->ANAC58       <----------DOF2-------- -----AHL20(2)   <---------ATHB12                      --------->ANAC58       --------------------->WRI1   tatttgggctaatgggccaataaaaatagaacctaaaggcccatagatgtaaaccctaagctataaataaaagacttcgtctttgatttcgccgcaagat  5448500                ------>ZmHOX2a(2)               --------->CCA1(2)               <------ZmHOX2a(2)       --------->ANAC58       --------->ANAC58       --------->ANAC46 ---------ARR11(3)    <---------AHL20(2) -------->ARR11(3)<------------------------ANAC81                             <---------TOE2(3) -----------GT1--------->ARR14(1)                                       <---------TOE2(2) -----CCA1(1) <---------ARR11(3)                                        <---------TOE1(2)          -- -----RVE1(1) --------->ARR11(3)                                   --------->ARR11(3)              <- --->ARR11(3) --------->ARR11(1)                                   <---------ARR11(3)              <- --->AHL20(1) --------->ARR14(2)                               --------->ANAC58              <------ZmHOX2a(1) ----ARR11(3) <---------ARR14(2)                               --------->ANAC46            --------->ANAC46 ----AHL20(1)--------->RVE1(1)                           ---------->ID1 <---------TOE1(3)  <--------- ->ANAC58   ----------->ARR10                           <-----------GT1 <---------TOE2(3)  <---------TOE2(3) ->ANAC58 ---------->DOF2      <---------YAB1 --------->GLK1(2)--------->ANAC58      xxxxxxxxxxxxxxxx   attatcttcacgaaaagatccgatttttttgttctgattttctgttaaaatctgaatttttcgctacgaaatcttaggttaagaatagcatataaggaac  5448600               ----------------------->TaNAC69(2)                                         <---------ANAC46          <------ZmHOX2a(1)                           <---------TOE1(2)                 <---------MYB46(3)    <---------YAB1   --------->TOE1(3)           <---------ARR11(3)                  --------->YAB1 ------->ARR14(2)   <---------At4g35610          --------->ARR11(3)                <---------WOX13(1) --------ARR14(2)  <---------TOE2(3)            <---------GLK1(1)                --------->ATHB12 --------GLK1(2)   <---------TOE1(3)            --------->GLK1(1)           <---------ARR11(3) ------AtSPL8  <----------DOF2             ---------->DOF2   <---------At4g35610<---------YAB1 xxxxxxx>smallRNA(se3)                   <XXXXXXXXXXXXXXXXXXXXMIR844        --------->ARR11(3)   agatttgtgataggagtctttaagcttagcactcatgtatagcttaaaagaaatcttatgttccgatgctaaatcaaacatcttcattgatggtttggag  5448700                                                                        <---------TOE1(2)                                                                <---------ARR11(3)                                                                --------->ARR11(3)           <-------                                  --------->LBD16          <-------TEIL <---------TOE2(2)   <--------                                <---------LBD16           --------->CCA1(2)                 <--------                             <-----------GT1             <---------ARR14(2)            <---------ARR11(3)                  --------->LBD16<---------ANAC46   <---------HSFB2a(2)=========================HOX2a_HOX2a                 --------->HSFB2a(2)  <---------ARR14(2) --------->ARR14(2)            --------->ARR11(3)                 <---------HSFB2a(2)  --------->ARR14(2) <---------GLK1(2)     <---------AHL20(2)       <---------REM1(1) <---------AHL20(2)         --------->HSFB2a(2)------>ZmHOX2a(1) ------>ZmHOX2a(2)   tctctggacatgtagcattctgggaattttttttcccgtggattctagcattttctcgagattcgacatcttcctatgtttttaattctgatcttatgtt  5448800  Previous    Next  AGI:  At5g16610.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO44747.1) Range:  from: 5444925    to: 5448316    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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