Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------AHL20(2)      <---------ICU4                        --------->TOE2(3)      --------->ATHB51         <---------AHL20(2)                                             <------      --------->AHL20(2)     <---------CCA1(1)                                            <---------AHL20(2)      <--------ATHB1         <---------RVE1(1)                                            --------->AHL20(2)     <---------ATHB12       --------->ARR11(3)      <---------AHL20(2)             ---------->DOF2     --------->ICU4         <---------GLK1(2)      --------->AHL20(2)             <---------AHL20(2)     <---------ATHB51       <---------ARR11(3)     <---------AHL20(2)           <---------YAB1------- --------GT1       <-----------RAV1(1)   <-----------GT1                     --------->AHL20(2)   aactccaataatttgactaaaatgttgcaagattttttttgttttacatcaaattaaatgtgatatagaaattggacgatttattaaaagaattatatat  5437900                                                                                                    -                                                                                                  ---                                                                                                 ----                                                                                                 <---                             <---------DAG2                                        --------->ARR11(3)                             <----------DOF2                          <---------ANAC46     <---------MYB52(1)                        --------->At4g35610                 <---------ICU4         <---------ARR11(3)                        <---------At4g35610                --------->ICU4          --------->ARR14(2) ---AHL20(2)       --------->YAB1                       <---------AHL20(2)         <---------ARR14(2) -->AHL20(2)      <-------TEIL                          --------->AHL20(2)    ----------->GT1    <---   atacacatttcatacacagtttcatcatctgctttttttcttcagtttaatggtttttttaattagtatgttatgtagaattgtagatattccgatggtc  5438000          <-------TEIL    <----------ID1                                                                      --------->AHL20(2)    --------->ANAC46                                                     <------MYB46(1)<---------AHL20(2)    --------->ANAC58                                                     <------MYB83  --------->ICU4    --------->ANAC58            <---------ICU4                           <---------MYB46(3) --------->DOF2          <---------ETT(2)                              <--------P      <---------YAB1 ------>LBD16            ----------->GT1         ----------->GT1    <---------TOE2(3)--------->YAB1 ------->GT1   <---------ARR11(3)         <-----------GT1           --------->DAG2  <---------AHL20(2) ------ANAC55(2) ------>ZmHOX2a(2)     <---------ICU4             ---------->DOF2   <---------YAB1 ------ANAC46  --------->ARR11(3)      --------->YAB1       ----------->GT1       --------->YAB1   --   cgtaaaacgacatacatgatctaaatgtcgataaatatcacttatgaccatatgtaaaaatatggattaaaaggttggatagatttataattaatagaag  5438100                          --------->TOE2(3)              <---------REM1(1)                                            <---------ANAC46     <---------HSFB2a(2)  ------->GAMYB                                  <---------ANAC46   <-------TEIL   <------MYB83                                         <-------GAMYB  --------->CCA1(2)      <---------MYB55(2)                           <---------MYB46(3)  --------->ARR14(1)     --------->MYB46(3)                           --------->MYB111(2) <---------ARR14(2)     -------->P                                <---------TOE2(3) --------->ARR14(2)     ------>MYB46(1)                      ----------->TBP --------->TOE1(2)<------MYB46(1)                          --------------->AGL15 --------->ARR11(1)     ------>MYB83     <-----------GT1  <-----------------AGL3 --------->ARR10 --------->MYB59--------->YAB1            ----------------->AGL3    <----------DOF2   gaagatacgagaagaaatgtaggtccaaccacaaacatggttttgacatctctctcactctctatatataggttgttgtgtagcctctttagtcttggaa  5438200                                                                   <---------AHL20(2)                                                                 <---------AHL20(2)                                                               <-----------TBP                                                               <---------AHL20(2)                     <---------ANAC55(2)                 <------MYB46(1)                     <------MYB83      --------->ARR11(3)<------MYB83                     ----------->GT1   <---------ARR11(3)----------->GT1                     <------MYB46(1)  <---------CCA1(2) --------->MYB111(1)               --------->AHL20(1)   --------->YAB1 ---------->DOF2<---------AHL20(1)              <--          <---------YAB1          --------->ARR11(3)    --------->MYB59                           ---        --------->YAB1            <---------ARR11(3)--------->DAG2--------->AHL20(1)             ----       <---------YAB1--------->ANAC55(2)      ----------->TBP----------->TBP                     ----    <---------ARR11(3)           --------->YAB1 ----------->TBP--------->AHL20(2)          --------->ALFIN1 ----------->RAV1(1)--------->MYB59<---------YAB1 <---------AHL20(2)                     --------->CCA1(2)   atacaacatattataagtatattaggtaacatatatgatcatatctctatatataaagtaggtatatatatatttagcgagagagggagagagatgggga  5438300          ----------->HVH21        ----------->GT1 ----NtERF2              ---------->DOF2 ------>ATERF1(1)    ----------->GT1                                                            <---- ----->ANAC58        <---------ZAT6                                                            <----- ----->ANAC58 ---------->DOF2---------->DOF2        <----------ID1            ------>ZmHOX2a(1)<-----   ggcaaccatgttgtgacaaagtagggttaaagaaagggccatggactattgaagaagacaagaagctcatcaacttcatcctcaccaatggccattgctg  5438400     <---------ARR11(3)     --------->ARR11(3)                                       <---------MYB52(1) ---GAMYB        <----------DOF2                      --------->ANAC58 ----MYB46(3) --------->ANAC58       <----------DOF2  --------->ANAC58                           <--- ------RAV1(1)--------->ANAC58<-----------GT1         --------->ANAC46      <---------YAB1       <---   ttggagagctcttcccaagctttctggtttattatctctctttctcttaacttaacaagacaccgtttgtgatggctcatgtttagaaatttcagttttg  5438500                     <---------ARR11(3)                                      ---------->ID1                 --------------------->WRI1                                <---------MYB46(3)           <----------DOF2 --------->DEAR3(2)                              <-----------RAV1(1)     <----------DOF2 --------->ARR11(3)                           --------->DAG2     <---------DAG2 <---------CCA1(2)                 ---------->ID1  <-------TEIL ------ANAC58   --------->TOE1(3)                 <----------DOF2 <---------------AtSPL8 ------ANAC58   --------->TOE2(3)             <----------DOF2    ---------->DOF2   <---------YAB1   cttcacactttttctttaccttaaatcttaccgacgaaaacgatactactttctttgtttttttgaaaaaagtacatttgttgttttcattcaagtttcc  5438600                                                  <----------DOF2                                                 <---------DAG2                                           --------------->AtSPL8                                         <---------AHL20(2)                                         <---------AHL20(1)                                         --------->AHL20(2)  <---------ICU4            <----------DOF2                                     ------>ZmHOX2a(1)  <---------AHL20(2)          <---------ARR11(3)                           ------>ZmHOX2a(1)  <-----------GT1--------->YAB1         --------->ARR11(3)   gatttttcagttatagacccatctcactcctactgattcctattttatttaccttttttttattcattacctagtagttttcatgagttctttagacaca  5438700                                  --------->AHL20(2)                                  <---------YAB1             ------->GAMYB                                 --------->AHL20(1)         --------->ANAC46                                 --------->AHL20(2)         --------->ANAC58                            --------->AHL20(2)              --------->ANAC58                          <---------TOE2(3)       --------->AHL20(1)                     <--------HAHB4               <---------AHL20(1)                     <---------ICU4               --------->ARR11(3)         <--------ATHB1                     --------->YAB1               <---------ARR11(3)         <---------ICU4                     <--------ATHB1               <---------AHL20(2)         --------->YAB1                     --------->ATHB51             --------->AHL20(2)        --------->ICU4 <---------DAG2                    --------->AHL20(2)           --------->AHL20(2)         <---------ATHB12                    <---------ATHB12         <---------AHL20(2) --------->ANAC58           <---------                    <---------ATHB51         --------->AHL20(2) --------->ANAC58   <-----------GT1                    --------->ICU4<---------AHL20(2)   <-----------GT1      <---------ATHB51              --------->ANAC46   <---------AHL20(1)<---------AHL20(2)  --------->YAB1 <---------DAG2   tatactaataggttatgcgccaataattaagaaaatataatttgattttaaatatattttcaacgcaagaaaatcacaataattctcaccttactttttg  5438800  Previous    Next  AGI:  At5g16600.1    Description:  MYB43 (myb domain protein 43); DNA binding / transcription factor. similar to MYB20 (myb domain protein 20), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G66230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44751.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 5438294    to: 5440248    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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