Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->YAB1                                                                        --------->YAB1                                                                       --------->AHL20(2)                                                                     --------->TOE2(3)                  <---------ANAC58                         --------->AHL20(2)    <----------DOF2                                        <---------AHL20(2) --------->AHL20(2) --------GT1      <---------ANAC58          --------->YAB1--------->AHL20(2) --------->AHL20(2)     - >YAB1            <---------AtLEC2          --------->TOE1(3)  <---------AHL20(2)                   < >AHL20(2)        <---------ANAC46          --------->TOE2(3)  <---------ATHB51    --------->MYB52(1)   aacatactttcccaagagttgcatgtttccatcgtacataataaaaccataactaaacaatttaaattattcattaaaaataaaaaaacggatagtattt  5431300                                         <---------YAB1                                       <---------ICU4                        <---------AHL20(2) --------->ARR11(3)                     <----------DOF2   --------->YAB1              <---------TOE2(3)    --------->ICU4             ---------->DOF2<---------AHL20(2)          --------->TOE2(3) --------->AHL20(2)<----------DOF2        --------------->AGL15 --------->ANAC55(2)                        --------->ZAT6        <---------------AGL15 <---------ANAC55(2) <-----------GT1      <-----------GT1          -----       <-----------GT1  --------->AHL20(2) <---------ARR11(3)   ----------->GT1                ------    <---------ICU4<---------ARR11(3)  <---------YAB1            --------->ICU4                 <----- -------->AHL20(2)--------->ARR11(3)<---------AHL20(2)     <---------ANAC55(2)                 <----- ---------AHL20(2)--------->GLK1(2)--------->AHL20(2)      --------->ANAC55(2)       <-----------ARR10   gtttaattttcacattaaagtatcttttaattaagtatttattattatcttttatctacttatgtaatgtttataacacttcttacaaatctctccagat  5431400                                                                               ---------->DOF2         ----------->GT1                 <---------YAB1                      --------->AHL20(2)  --------->YAB1              <---------ANAC55(2)                            <---------AHL20(2) ---->GLK1(2)                 ----------->GT1                                --------->YAB1 --->ARR14(2)           <---------AHL20(2)                               <---------ATHB51         <-- ----GLK1(2)            --------->AHL20(2)--------->ATHB12        <-----------GT1   <---------REM1(1) ----ARR14(2)   ---------->DOF2      --------->YAB1        ----------->GT1--------->YAB1   <---------KAN4(2)   tccttcataaatggaaacaaaagcatttaaatatgtaaatcatatgatttgttactgaaaatgctaaattacacaataataaaaagatgtaagaatatac  5431500                                                              --------->GLK1(2)                                                    <---------AHL20(2)                                                --------->AHL20(2)                                                <---------AHL20(1)                                                <---------AHL20(2)                                               --------->AHL20(2)                                  --------->ANAC58  --------->AHL20(2)                                  --------->ANAC55(1)    ---------->DOF2                                  --------->ANAC58 --------->AHL20(2)                                  --------->ANAC46 <---------AHL20(2)                                  --------->ANAC55(2)   <---------AHL20(2)  --------->At5g28300   <--                           <---------ICU4  --------->AHL20(2)--------->ARR11(3)                 <----                          <---------AHL20(2)   <---------AHL20(2)   ------->TEIL                -----                   --------->At5g28300     <---------AHL20(2)<---------GLK1(2)           --------->DAG2       <---------CCA1(2)--------->YAB1 --------->ICU4   --------->AHL20(2) ----------->GT1----------- -------At4g35610 ----------->GT1<---------LBD16--------->AHL20(1) <---------CCA1(2)   ---------->DOF2   agcaaactcatttcttcttgctgtaaaaataatcgcacggaatatttaaataaattaataaaagattctgtatctcactgtaaaaactaaaaaggtaaaa  5431600                                          --------->AHL20(2)            <----------DOF2               <---------AHL20(2)            <---------DAG2               --------->ICU4                  <---------At4g35610         <-----------GT1                 <---------ATHB12                --------->At4g35610   ------------>CBF           <---------ZAT18                          <---------ICU4  <------NtERF2 ----------CBF                <---------ZAT14                       --------->YAB1    <-----------HVH21 -----AHL20(2)                --------->ZAT14                       --------->REM1(1) <---------RAP2.6(3) ---->AHL20(2)    <----------DOF2    ------------>CBF             ------>ZmHOX2a(1)  --------->DEAR3(1) >GT1   --------->AHL20(2) <---------At5g28300                 ------>ZmHOX2a(1)    *TSS   aattgaacaattaactttttctttccattcactgcagtctgcaattaatagcctctctctctctcctccttcatcatctccccatagccgtcgagacaga  5431700                                  <---------ETT(1)                                  >>>>>>>>>>AtTINY2                         <---------ARR14(3)                                  --------->ARR11(3)                         --------->ARR14(2)                       --------->ANAC55(2)                         <---------GLK1(2)                        --------->ANAC58                         --------->ARR11(3)                       --------->ANAC58          ------>MYB83                         <---------ARR11(3)                       --------->ANAC46          ------>MYB46(1)     <---------ZAT2    ----------->ARR10                  <---------ZAT14   --------->GLK1(1)     --------->At4g35610 <---------ARR14(2)   <----------DOF2  <---------REM1(2)<---------LBD16     <     <---------At4g35610 --------->ARR14(3)<-----------GT1--------->ZAT14   <---------GLK1(1)     ---   tagagagagctgaaatttctgtgagaagattttcttccgacattttctctttccaaacactgttctacacgtagtcggaaatctcggaaaaaccaatctc  5431800                                   <---------TOE2(3)                                 ---------->DOF2                           <-----------RAV1(1)                       --------->ZAT14                       --------->ZAT18                       <---------ZAT14                       --------->WRKY38(1)                      --------->DOF5.7(2)    <----------DOF2                    <---------ANAC46      <---------TOE1(3)                      --------->MYB59 -----------HVH21   <---------ANAC58      <---------TOE2(3)               <-----------------AGL1 ------>LBD16       <---------ANAC58 <------ZmHOX2a(1)                    ----------------->AGL1  <<<   cgagtcagagagagagagagaggcgttcactgttgtaaaggattaagctttgggtaagaagaagatgaagaacaagaccaatttaggtctctcagtcttc  5431900                                  <---------HSFB2a(2)                                  --------->HSFB2a(2)                                  <---------HSFC1(1)                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR11(3)                               --------->ARR11(3)                               --------->AGP1                               <---------AGP1                               --------->ARR14(2)                               <---------ARR14(2)                              <---------CCA1(2)                         <---------TGA2(1)                         --------->TGA2(1)                         <---------bZIP60(1)                         --------->bZIP60(1)                      ----------->HVH21                     --------->LBD16                     <-----------HVH21                    <---------ANAC58                    <---------ANAC46                    <---------ANAC58                    <---------ANAC55(2)                                <---------DEAR3(1)                    --------->ANAC55(2)                             ----------->HVH21         <------                 --------->ARR14(2)          ------>ZmHOX2a(2)      ----------->TGA1  <------NtERF2   <----------DOF2  <---------ANAC55(1)<---------At4g35610        <---------ANAC58  <---------ANAC58 <<<<<<TBF1      <---------ARR14(2)    --------->At4g35610        <---------ANAC58  <---------ANAC58   ttcttctttatatgtctcgtttccgtgacatcagatctagaagctgatcgacgagctctaatcgcacttcgtgacggtgttcatgggcgtccattgctgt  5432000                  <---------ZAT18                  --------->ZAT14                           <---------ALFIN1                  <---------ZAT14                          --------->ZAT14               <---------ANAC46                            <---------ZAT18            --------->AtMYB61                              <---------ZAT14            <---------ALFIN1                          ----------->HVH21            --------->DEAR3(1)                       <-----------HVH21           --------->MYB46(3)                     <---------ANAC46            --------->ALFIN1        --------->At4g35610                       <---------ANAC58          --------->ALFIN1       ------->GAMYB------->TEIL                  <---------ANAC58          <---------ANAC46    --------->MYB52(1)                        <---------DEAR3(2)          --------->LBD16 ---ANAC46 <---------ABI4(2)  <------ZmHOX2a(1) <-----------HVH21       <---------LBD16     <-------TEIL   ggaatctaacagcaccaccgtgtacttggggaggagtccaatgtgagtcgggtcgtgtcacagcactccgattacccggtgtgggtttatcgggtccatt  5432100                                                                              --------->GLK1(1)                                                                              <---------GLK1(1)                                                                             --------->ARR14(2)                                                                         <---------LBD16                                                                        --------->LBD16                                                                        ------>NtERF2                                                                       --------->ANAC46                                                                      <---------LBD16                                                                      --------->MYB46(3)                           --------->ANAC58                       ------>ZmHOX2a(1)                           --------->ANAC58<---------YAB1         --------->At4g35610       ---------   ------->GAMYB--------->TOE1(3)     <---------ICU4              <---------At4g35610     ------>MYB46(1)  --------->MYB46(3) ---------->DOF2 <---------YAB1          ------->GAMYB --------->LBD16------>MYB83 ------>MYB83--------->GLK1(1)   <---------DAG2           --------->MYB52(1) <---------ARR14(2)     - ------>MYB46(1)--------->TOE2(3)<----------DOF2          <-----------GT1<------NtERF2  <---------MYB59   accaatcgccatcggaaaccttacaaagctcgaaactttatcattccgattcaatgctcttaacggtcctctcccgccggatttcgcaaacctaactctt  5432200  Previous    Next  AGI:  At5g16590.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. Identical to Probable inactive receptor kinase At5g16590 precursor [Arabidopsis Thaliana] (GB:Q9FMD7); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G02880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17149.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro doma Range:  from: 5431684    to: 5434137    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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