Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->LBD16                                  <---------At4g35610                         --------->bZIP60(2)                                  --------->At4g35610                         --------->ANAC46                                  --------->ZAT2                              =======================                                  <---------ZAT2------>ZmHOX2a(1)             --------->TGA1a                         --------->YAB1    --------->HSFB2a(1)              <---------ALFIN1                        --------->MYB46(3) <---------HSFB2a(1)     --------->ANAC58    --------->LBD16 ---------ICU4          <---------ATHB12 <---------GLK1(2)         --------->ANAC58   ----------->RAV1(2) ----->YAB1           --------->WOX13(1)<------ZmHOX2a(1)     <---------LBD16 ======================= ----->REM1(1)      --------->ZAT14  <---------LBD16         <---------ANAC46 --------->O2       ---- >ZmHOX2a(1)        <---------ZAT14  <-----------RAV1(2)     <-----------RAV1(1)--------->ZAT14------   catcatctctgcatcaagagactgcaatcaccacagagctcaggaatctcctagtctcttcttctgtggaagcaaaacccacatcactccctgaaacaac  5405000    ---------->DOF2 <---------At4g35610                                                               <---------------AGL15 --------->At4g35610                                                               <---------DAG2 ==============bZIP_DOF                                           ----------->GT1  --------------->AGL15 ===MYC_MYB                --------->ZAT14                        --------->ANAC55(2)         ------- ----->AtMYB61             <---------ZAT14                        <---------ANAC55(2)         ------- -->P                    --------->ANAC46          <---------CCA1(2)               <----------DOF2   ctctgctaaagacaccattgttgatgcacagcactgaaaaccctgtgttttgtctatcttgaaacaatatgtaacatttgttttgctttatcttgtaagc  5405100                               <---------GLK1(2)                             <---------YAB1                <---------ARR11(3)                                                           <------MYB46(1)                --------->ARR11(3)                                                           <------MYB83               --------->GLK1(1)      <----------DOF2                       --------->AHL20(2) <---------------AtSPL8------>ZmHOX2a(2)   ---------->ID1              --------->ZAT18      <-------- -->ANAC58     <---------GLK1(1)     <----------DOF2                   <---------ZAT18      --------- -->ANAC58    <---------ARR11(3)     <---------DAG2          ----------->RAV1(1)          <---------MYB52(1)   atttatgtacagagatgatatctgatctaatctgattcgccttttgttgtaattttctattggcaacagtttgtgcattaaaaaaaaaaacagtttggtc  5405200                                               <---------YAB1                                              ------------------------>ANAC81                                             --------->YAB1                        ------->MYC3                                             <---------ICU4                        ------->MYC2                                            --------->ICU4                         <-------MYC2                                          --------->TOE1(3)                        <-------MYC3                                  --------->YAB1--------->YAB1                   <---------TOE1(2)                                 <---------ATHB51         ----------->GT1     --------->ANAC58                                 <---------ATHB12 ---------->DOF2        --------->MYB46(3) -AtMYB61                 --------->ANAC58--------->TOE2(3)    ---------->DOF2--------->ANAC58 >MYB59                   --------->ANAC58--------->YAB1 >>>>>>>>>TBF1 <-----------GT1----------->HVH21   ttaaacgggccttcaaaaaacgtctaacaagcccaataataaaaccataatgaaaagaagaagaaaaaagaattaaccactcgcatgtgtaacgcgttga  5405300                                                            <---------DEAR3(2)                                                           <---------At1g77200                                                           <---------DEAR4(1)                                                        --------->O2                                                        <---------O2                                                        --------->ANAC46                                                        <---------TGA1a                                                   --------->ANAC46                                                   --------->ANAC58   ------->MYC3                                            ----------->GT1<---------DEAR3(1)                                      <---------DOF5.7(2)  <---------DREB2C(2)              ------->TEIL            --------->MYB52(1)--------->bZIP60(2)                  --------             <---------CCA1(2)       <---------WRKY12*TSS<-----------HVH21                  ---------         <-------GAMYB               ----------->HVH21  --------->TGA1a         --------->GLK1(1)    --------->ANAC58                 <---------WRKY38(1)==========================================bZIP_DOF    --------->ANAC46              --------->LBD16  --------->ANAC58   <-------MYC3         >>>>>>>>>MYB98    --------->ANAC58            <---------LBD16  ---------->DOF2   <---------ALFIN1    <----------DOF2  <---------ALFIN1             ------>ZmHOX2a(1) =================bZIP_DOF      <---------GLK1(1)   atacacacgctcgttgtatctatctatctactcctccggttaacgggggtttaaagccacgtcggtgctacacatgtccctgatttctcctttaacataa  5405400                       -------->ATHB1                       <--------HAHB4                       --------->YAB1                       <---------ICU4                      --------->ICU4                      <---------ATHB12                    --------->WOX13(1)                  --------->LBD16                             ------>ZmHOX2a(1)                  <------NtERF2                --------->TOE2(3)                 --------->ANAC58            <---------ARR11(3)                   <---------ARR14(2)                 --------->ANAC46           --------->CCA1(1) =================================HOX2a_HOX2a                 --------->ANAC58           --------->RVE1(1)<---------ANAC58  ================HOX2a_HOX2a                <---------LBD16         --------->YAB1       <---------ANAC58  ------>ZmHOX2a(1)  <--      <---------At4g35610               --------->AHL20(2)---------->ID1      --------->TOE2(3)------ ->TOE2(3)<---------MYB52(1)         --------->YAB1  <----------DOF2    <-----------GT1 <------ZmHOX2a(2) >YAB1--------->At4g35610  <---------ARR11(3)--------->ARR11(3)     <---------YAB1--------->ARR14(2)<   aactaaacagctgttttgtccgcaatcattatctattactaataaaaaatctcaacttttgttccttactcttattacttcctaaatccgatcgaaacaa  5405500                                                                                            <--------                                                                                          <---------DREB2C(2)                                                                                          <---------DEAR3(1)                                                                                          <---------DEAR4(1)                                                                                          --------->ETT(1)                                                                                         --------->DDF1                                                                                        <-----------HVH21                                                                                       <---------bZIP60(1)                                                                               ------>NtERF2<------NtERF2                                                                              --------->ALFIN1                                                                              <---------DEAR3(1)                                                                             <-------GAMYB<---------At1g77200                                                                            <---------DEAR3(2)                                                                           <---------DREB2C(2)                                                                           <---------DEAR3(1)                                                                           <---------DEAR4(1)                                                                           <---------At1g77200                                                                           --------->ETT(1)<---------RAP2.3(1)       --------->MYB52(2)                                                <-----------HVH21<---------RAP2.3(3)     <---------MYB52(1)                                             <------NtERF2<---------ANAC46     <--------P                                 ----------->GT1    ------>NtERF2<------NtERF2   <------MYB46(1)                  <------ZmHOX2a(2)              <---------RAP2.6(3) --------->bZIP60(1)   <------MYB83                    --------->ARR11(3)             --------->DEAR3(1)   <-----------RAV1(1) ---------RAV1(1)                  <---------ARR11(3)       --------->TOE2(3)--------->ATERF1(1) --->MYB52(1)                  <------NtERF2----------->HVH21<----------DOF2<---------MYB46(3) ---------MYB52(1)           <---------ANAC46--------->MYB52(1)  --------->DEAR3(2) --------->ICU4  <   ctgttgggttagtttctaatttccaagaatggcgcaagatcacgacgagacggagaataaaacctttgccgacgttgtcggtggcgatgatgtcggcgaa  5405600          <------ZmHOX2a(1)      ------->GAMYB    --------->At4g35610    <---------At4g35610   --------->MYB52(1)                                                                           <----  <---------WRKY38(1)                                           <---------ARR14(2)    --------->ATHB12  <---------WRKY12                                              --------->ARR14(2) <---------ANAC58 -------------WRI1                 --------->LBD16             <------ZmHOX2a(1)   --------->TOE2(3)< -----------HVH21          --------->YAB1             <---------At4g35610          <---------ANAC58--   attgtcaacggaggaacaaagaatggctatcgtaaaccggactctgtggagaaggaagatgatgaggatttgaagagtctctattccttgatttgtctca  5405700                                  ----------->HVH21           --------->ANAC58                                  --------->ALFIN1            --------->ANAC58                       <-------TEIL                      ------->MYC2         --------->GLK1(2)       <-----------HVH21       <-------MYC2        <---------GLK1(2)    --------->MYB52(1)   <---------ANAC46        <---------At4g35610  <---------MYB46(3) <---------GLK1(2)            <---------ANAC58<---------HSFC1(2)            <----  <---------DEAR3(2) <---------ARR14(2)           <---------ANAC58<---------HSFB2a(1)           <---- ------>ZmHOX2a(2)   --------->ARR14(2)        <---------MYB52(1) --------->HSFC1(2)            ----- -----TOE1(2)     --------->HSFB2a(2)  <---------ANAC46  <-------MYC3     --------->At4g35610   ----- ------ZmHOX2a(2) <---------HSFB2a(2)  <---------ANAC58  ------->MYC3    <---------DEAR3(1)<---------HSFC1(2) ------->ARR14(2)----------------->AGL1<---------ANAC58------->TEIL    <-----------HVH21   --------->HSFC1(2)   cgatcggttcgattctgtttccagattcgaaaaccggtgatgcgtcttcgtttcttgaacgtgtaagaaactccgtcgctgaaaatgggcctaagcttcg  5405800        ---------->DOF2                                      --------->ZAT18      <---------HSFB2a(2)                                    --------->ZAT14      --------->HSFB2a(2)                                    <---------ZAT14                        -    --------->At4g35610                                   <---------ANAC58                          - --------->HSFC1(2)                                       <---------ANAC46                        --- <---------HSFB2a(1)             <---------LBD16          <---------ANAC58                      ----- --------->HSFB2a(1)      --------->GLK1(2)         <---------ZAT18                         <-------- <---------HSFC1(2)       <-----------ARR10       <---------ZAT2                          <--------ATHB1 -----HSFB2a(2)          <---------GLK1(2)        --------->At4g35610          --------->At5g28300<-- -----HSFC1(1)     --------->ANAC58               --------->ZAT2   <---------ANAC58       --------->ATHB12 ---->HSFB2a(2)    --------->ANAC58               <---------At4g35610     <---------YAB1 <---------YAB1 ---->HSFC1(1)   <------ZmHOX2a(1) --------->ZAT14<------NtERF2    <---------ANAC58      --------->ICU4   agaagcttctgaaagaacaggacgcgagattcttctctggactcgtagaggcagctcgcttcgtgctctgcttgtcatcactgtaagtagaatgattgaa  5405900  Previous    Next  AGI:  At5g16540.1    Description:  ZFN3 (ZINC FINGER PROTEIN 3); nucleic acid binding. Identical to Zinc finger type domain-containing protein ZFN3 (ZFN3) [Arabidopsis Thaliana] (GB:Q8L7N8;GB:Q8LFU7;GB:Q9XFB9); similar to ZFN1 (ZINC FINGER PROTEIN 1), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G02830.1); similar to hypothetical protein OsI_004824 [Oryza sativa (indica cultivar-group)] (GB:EAY76977.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 5403191    to: 5405157    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g16550.1    Description:  similar to unknown [Gossypium hirsutum] (GB:ABO31374.1) Range:  from: 5405353    to: 5406890    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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