Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ARR11(3)                                                    <<<<<<<ZML2                   --------->ARR11(3)                                         --------->ANAC46               ---------->DOF2                                                --------->WOX13(1)        <-------TEIL    --------->YAB1               ----------->GT1      --------->RVE1(1) <----------DOF2  --------->YAB1           --------->YAB1                 --------->CCA1(1) ------GT1   ----------->HVH21         --------->MYB46(3)           --------->YAB1 --------->ZAT6 ---   ccgctttggatacatgtgaaagataatcagaaatagcgataacaaacatgaataagtgtaaattgctctatcaaaaatatccatcacactagaacagtaa  5389600                                                      <---------ANAC55(2)                                                      --------->ANAC55(2)                            <---------ARR11(3)        --------->ANAC55(1)                            --------->GLK1(2)    <------MYB46(1)                            --------->ARR11(3)   <------MYB83                  <--------HAHB4                   ----------->HVH21           <--------P                   <-----------GT1                 --------->ANAC55(2)         <------MYB46(1)--------->ARR11(3) --------->ATHB12                 <---------ANAC55(2)         --------->ATHB12              <---------AHL20(2)               <---------AHL20(2)            --------->MYB55(2)            --------->AHL20(2)           <---------AHL20(2)                <---------MYB46(3)           --------->AHL20(2)           --------->AHL20(2)--------->RVE1(1)<---------ANAC46       ------>NtERF2        <----------DOF2    <---------GLK1(2) <------MYB83   <---------ARR11(3) <---------ICU4 -------->GT1  <-----------GT1              <---------AtMYB61  <----------DOF2<---------ATHB12   gggtgaattacttttaattacatgacccaaaatctctgatcagggattggttggacacttaacatctttgaggccatttaatcatttatcaacaagtgtt  5389700                 <---------AHL20(2)                 --------->AHL20(1)                 --------->AHL20(2)                --------->AHL20(2)                                  <-----------GT1         ----------->HVH21                         <---------WOX13(1)                         -------      --------->LBD16             <-------TEIL--------->TOE2(3)    <---------YAB1             <------    <---------LBD16     --------->TOE2(3)<---------AHL20(2)      --------->YAB1            --------->YAB1   --------->MYB52(1)<-----------GT1     --------->AHL20(2)   --------->YAB1            ------>ZmHOX2a(1)   cttcataccggatgacaattttattaccacaatacatacatatttatttcttaattgaaaacaaaaattataacaaaacatttgtttttcctctaataaa  5389800          <----------DOF2          <---------------AGL15              <---------ARR14(2)                          --------->TOE2(3)          --------------->AGL15 <---------ATHB12 ------>ZmHOX2a(1)                 <---------HSFB2a(2)          <---------DAG2    <---------MYB59  --------->ARR14(2)             <---------TOE1(2) <-------TEIL        --------->AHL20(2) <---------ZAT2   --------->TOE2(3) ------>ZmHOX2a(1)        < -->AHL20(2)        --------->CCA1(2)   --------->At4g35610               --------->TOE2(3)  <------- ---AHL20(2)      <<<<<<<<<RAP2.2       <---------At4g35610  <---------TOE2(3)     --------->HSFB2a(2)   acatacatatgactttttttagatataataccgaatcaagagagctgaatcctttgaaacattaatgtattcttatcctaagtttccaaaacattaatgt  5389900                                                         <---------YAB1                                                    --------->bZIP60(1)                                                    <---------bZIP60(1)                                                <-------MYC2                                                ------->MYC3                                                <-------MYC3                                                -------->ABF1                                                ------->MYC4                                                ------->MYC2                                                <-------MYC4                                               --------->O2                                               <--------ABF1                                               --------->ANAC55(2)                                               <---------O2                       --------->AHL20(2)      ==========================================bZIP_DOF                       <---------AHL20(2)      <---------ANAC55(2)                      --------->AHL20(1)       <---------TGA1a        <----------DOF2                      <---------AHL20(1)       ==================================bZIP_DOF                      --------->AHL20(2)       --------->TGA1a     <---------TOE1(3) <---------CCA1(2) -----------GT1       <---------AHL20(2)  ----------->HVH21<----------DOF2    <---------DAG2 --TOE2(3)   <----------ID1 <-----------GT1    =======================bZIP_DOF<----------DOF2   attatcccttactatacaacaaaataaaattaaccatttcatatttgacacgtgtcatcatctttagttaagcttttccactttcccatctctctctctc  5390000                             *TSS                            <---------ATERF1(1)                            ------>NtERF2                            <---------SPL7                           --------->DEAR3(1)              --------->TOE1(3)                          --------->RAP2.3(1)             --------->ZAT6                          --------->ATERF1(1)     <---------At4g35610                          --------->DEAR4(2)   ------>NtERF2 <---------STY1(1)                          <------NtERF2        <---------ALFIN1                         <---------RAP2.3(1)  ----------->HVH21--------->RAP2.6(3)                         ------>NtERF2        --------->DEAR3(1)               <----------DOF2                --------->ANAC46--------->MYB52(1)            ------>NtERF2      <----------DOF2   <---------DEAR3(1)   --------->HSFB2a(2)            <---------At5g28300  ----   ------>ZmHOX2a(1) <-----------RAV1(1)     <---------HSFB2a(2)           <-----------GT1 --------->DEAR3(1)   tcttcctcctttcatttctttttgtgtcgccgtctgcaatttctctccccgacgctgataaccctagcggcttcaaattacagtcgcttaacgccgagtt  5390100                                               <---------LBD16                                             ------>ZmHOX2a(2)                                            <---------GLK1(1)                                            <------ZmHOX2a(2)                                           <---------ARR14(2)                                           --------->ARR14(3)                                           --------->ARR14(2)                                           <---------ARR11(3)                                           --------->ARR11(3)                                           <---------ARR14(3)                                          --------->HSFB2a(1)                                          <---------HSFB2a(1)                                     --------->HSFB2a(2)                    <-----------RAV1(1)                                     <---------HSFB2a(2)              --------->DAG2                                    <---------ANAC46             <---------HSFC1(1)                                  <-----------HVH21              --------->HSFC1(1)                          --------->MYB59 --------->HSFC1(2)     --------->HSFB2a(2)                   ----------->RAV1(2)   ----------->ARR10 <---------------AGL15                   ==========================RAV <---------MYB52(1) ---------->DOF2               --------->ANAC58  <-----------RAV1(1)      --------------->AGL15            --------->ARR14(2) --------->At4g35610        <-----------------AGL3                  <--    --------->DEAR3(1) <---------GLK1(2) ---------->TaMYB80--------------->AGL15             <-------   <------NtERF2  ------->TEIL<---------MYB46(3) --------->LBD16 <---------HSFB2a(2)    <---------MYB52(1)  ------>NtERF2--------->ANAC58<---------At4g35610       ----------------->AGL1        <-------GAMYB ----->MYB59<---------ARR14(2)<---------DEAR3(1)--------->ANAC46<---------LBD16 <---------At4g35610   aggccaccgagtccgatacgaacctgattcggtcgctgtcgcgaagatccccgtagttttccaatttctggaaaggttttgttgctgtctgttaatttcc  5390200                                                                   ---------->DOF2                                                                 ------>ZmHOX2a(1)                                                                --------->TOE1(3)                              <---------YAB1                    --------->TOE2(3)                --------->ARR11(3)                       <---------AHL20(2)           <---------MYB46(3) --------DOF2   <---------ARR11(3)                    <----------DOF2        <----------DOF2     <--- ----GT1       --------->GLK1(1) <-----------------AGL1  --------->AHL20(2)---------->ID1        <---   ctttgaattgttgtctgaaatctttgggaaatgttattgattttggaaatgggtctcttttaatttccttaaagtttgtcttttttgtttgttaattgag  5390300                                                     <-----------GT1                                                  ----------------------->TaNAC69(2)                                                 --------->ARR11(3)                                            ===================================HOX2a_HOX2a                                            ------>ZmHOX2a(2)         <---------ATHB12                  ====================================HOX2a_HOX2a        --------->ANAC58                   <------ZmHOX2a(2)        --------->ANAC58                <---------ANAC58     ------>ZmHOX2a(2)     <---------AHL20(2)    <---------ARR11(3)                   --------->ALFIN1 ------ANAC58       ----------->GT1     <---------ANAC58                ------>ZmHOX2a(1) ------ANAC58----------->GT1       <-----------RAV1(1)     <----------DOF2      ------->TEIL   cttgtgatccaagcatggaaattagttatttttttttgtgttgcgatctgagattttgcctctttatgtctctcctagtatgtaccaagtgtgtgttctt  5390400                                                          <-------TEIL                           ----           <---------ANAC55(2)                         <---------At4g35610                      <----           --------->ANAC55(2)                         --------->At4g35610      <---------At4g35610      <---------YAB1                                 --------->HSFB2a(2)        --------->At4g35610   --------->GLK1(2)                                 <---------HSFB2a(2) ----------->HVH21 <--------- <---------At4g35610                            <---------DAG2          <---------ANAC46<-----------GT1 --------->At4g35610<---------AtLEC2            <----------DOF2    --------->MYB52(1)   <---------AHL20(2)   gtgagatgctgataagtattttgcattgaaatcacagagacgaagaaacccttttccagatgcaatgcctaatggctgatggagctctaattactttaga  5390500  Previous    Next  AGI:  At5g16505.1    Description:  transposable element gene. Mutator-like transposase family, has a 1.4e-59 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays) Range:  from: 5390029    to: 5392386    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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