Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <------ZmHOX2a(2)                                                    <---------ARR11(3)                      <---------TOE2(3)             --------->ARR11(3)            <---------MYB59                         <---------ARR14(2)                        -------      <---------------AtSPL8                        --------->ARR14(2)                >>>>>>>ZML2      --------------->AtSPL8                       <------ZmHOX2a(1)                  --------->HSFB2a(2)     <---------ARR11(3) --------->TOE2(3) <-------MYC3                                <---------HSFB2a(2) ---------->DOF2   <---------YAB1    <------ZmHOX2a(1)        ------->TEIL       <---------MYB46(3) -->HSFB2a(2) ------>MYB46(1)        =======================HOX2a_HOX2a         --------->ALFIN1 ---- ---HSFB2a(2) ------>MYB83 ---------->DOF2------->MYC3------>ZmHOX2a(2)      --------->DAG2   ------- ---AGL15   <---------MYB111(1)      ========================HOX2a_HOX2a    ---------->DOF2  --------   aagaaaagatagtaccaacttataaatgttaaagagtgaggacacatgtactaggatctatatgaaccaaaaacatgtaaaagtggttctagcaaatgtt  5384800                                            <---------------AtSPL8                               ----                              <---------ANAC58                                                   ----                              <---------ANAC55(2)                                              <-----                    ----------->GT1         --------------->AtSPL8                           --------        --------->ARR14(2)    <---------ANAC58                                               -------- -->TOE2(3)    <---------AHL20(2)       --------->TOE2(3)                                   <-------- ----->AHL20(2)--------->AHL20(2)     <-------TEIL                                  <---------ARR11(3) ---->GT1   ----------->GT1   --------->ANAC55(2)          ---------->DOF2          --------->ARR11(3) --->GT1<---------ARR14(2)    ----------->GT1          <-----------GT1     --------->ARR11(3)<-------   aaaatttgccaatacgtttaaatggtataatttcgtaacatacattagagtacaatattaccaaagagttgagaaatggtcttgaagctcttgaaaatcc  5384900 ------->GT1 ----->LBD16                          --------->ARR11(3) ----LBD16                         --------->ANAC58                             --------->ANAC58 ->GLK1(2)                  --------->ARR14(2)                                  --------->ANAC46 ->ARR14(2)         --------->LBD16--------->ANAC46                             --------->ANAC58 -GLK1(1)         <---------LBD16  --------->ANAC58                    ------>ZmHOX2a(1) --ARR14(2)  <---------GLK1(1) --------->ANAC46                     ------>ZmHOX2a(1)   <----------DOF2   ggttaataccgatagaaatctccggtttagaaaccgcaaggaacttgaatacattcttcatgttatcttcctcctcttgttcacgaatcacttttgaaaa  5385000                                                  --------->AHL20(2)                                                  <---------AHL20(2)                                          --------->AHL20(2)                                      --------->AHL20(2)                                   <---------RVE1(1)                           <-------TEIL<---------AHL20(2)   --------->ARR11(3)                          --------->CCA1(2)     --------->AHL20(2)                         --------->ARR14(2)    <---------ARR11(3)                         <---------ARR14(2)    --------->AHL20(1)--------->AHL20(2)    --------->TOE2(3)                <---------YAB1    <---------ARR11(3)        <---------ARR11(3)   <---------KAN4(2)              --------->YAB1      --------->ARR11(3)   <-------TEIL ---------->DOF2    --------->TOE1(3)    <---------TOE2(3)    <---------ARR11(3)    <---------AHL20(1)<---------AHL20(2)  ------->TEIL   cacatcaaggtatatatcacaatagaagatacatgagatattaattcaatatatatatacatgatatttaaaaagagagagggaatgaaccttgacgaga  5385100            <---------ANAC46    --------->ICU4                  ----------->RAV1(1)                       --------->AtMYB61    <---------YAB1             --------->RAP2.6(3)   --------->CCA1(2)   --------->ANAC58  --------->YAB1              --------->MYB52(1)   --------->GLK1(1)     --------->ANAC58 <---------YAB1         <----------ID1<---------ALFIN1<-------TEIL ---------->DOF2 --------->ICU4        <------ZmHOX2a(1)         <---------------------WRI1 ----------->RAV1(1)   gtgatgatgatgaggcttagagagaggagacaaaacggcaacacttgagacggagatacatccgatggagaaaggaagcaccacaagtctctccattcta  5385200                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                             ------>MYB83                                                                                            ---------                  <----------DOF2          <-----------TBP                                 --------->MYB46(3)                *TSS   <----------DOF2   <---------AHL20(2)                    --------->YAB1------>MYB46(1)              ------>MYB46(1)            <-----------TBP             <-----------TBP       ------->GAMYB              --------->ANAC58           --------->AHL20(2)         ------->TEIL           <---------MYB55(2)              --------->ANAC58         <-----------TBP        <---------ARR14(2)         --------->ANAC58              ------>MYB83 --------->AHL20(2)                 --------->ARR14(2)         --------->ANAC58   tctctcattttctaccaagcctttccttttaaaatacttctatttatatataagagtatgtgtgtatatgtatatatacgatgaaaatgacaacccacca  5385300                                                           <---------AtMYB61                                                       <---------ANAC58                                                       <-------GAMYB                                                       <---------ANAC58                                                      <------MYB83                                                --------->AHL20(2)                                                <---------YAB1      <---------TOE2(3)                        --------->AHL20(2)                     <----------DOF2 -->MYB46(1)                                   --------->AHL20(1)               --------->At4g35610 -->MYB83                                      <---------AHL20(1)       <---------ANAC55(1) ----MYB55(2)                         <-----------RAV1(1)<---------MYB46(3)     <---------At4g35610 --->MYB46(3)                       <----------DOF2   <------MYB46(1)   --------->ANAC55(2) --->AtMYB61                       <---------ICU4    --------->MYB59    <---------ANAC55(2) >ANAC46      <-----------RAV1(1) --------->ICU4<---------AHL20(2)      <---------ANAC46        -----   aatgttttgatgtaatttgttgttgttttgtttgtaatctttgttggaatataatttggttgtggtcgtgaattatgtgtttagctgactttgttgtgaa  5385400             <---------ANAC46                                                         <---------ANAC46             --------->ANAC55(2)                                                      <------MYB46(1)             <---------ANAC58                                                         <------MYB83             <---------ANAC58  <---------ANAC58                                      <---------MYB46(3)             <---------ANAC55(1)                                                     --------->MYB111(2)       <---------YAB1          <---------ANAC46                                      --------->MYB46(2)     --------->YAB1            <---------ANAC58                                      --------->MYB59    --------->ICU4            <---------LBD16               <---------AHL20(2)       --------->MYB111(1)    <---------ATHB12<---------ARR14(2)               <----------DOF2               <---------MYB52(1) ------>GT1  <---------ANAC55(2)          ---------->DOF2  --------->AHL20(2)--------->MYB46(3)     <   gttacaatgatgtttacgtgtgtatatgaagttgcggtagaatagaaagtgatagctttcattttatattttgggctcaactactgtttggtagactgtt  5385500                                       <---------AHL20(2)                                      <---------AHL20(1)                                      --------->AHL20(1)                                     <---------AHL20(2)                                   <---------AHL20(2)       ----------->GT1             --------->AHL20(2)       <---------ANAC46          <---------AHL20(2)       <---------ANAC55(2)     --------->AHL20(2)       <---------ANAC58        <---------AHL20(2)       --------->ANAC55(2)   <---------AHL20(2)       <---------ANAC58      --------->AHL20(2)       <---------ANAC55(1) <---------AHL20(2)     <---------TGA2(2)     --------->AHL20(2)                     ----------->GT1    ----------->TGA1     --------->AHL20(2)                  --------->YAB1    ----------->HVH21    <---------AHL20(2)                 <---------YAB1  --------->ARR11(3) ----------DOF2  --------->ZAT18 --------->AHL20(2)    ----------->GT1      <---------ARR11(3)      -   ttctttgtgacgtataatttgcactatatatatatatatatatatttgatatcaaaaatgttataatatggataattagatattgatatttgtatattgc  5385600                                                         <---------YAB1                                                       <---------MYB46(3)                                                       --------->MYB52(2)                                                   <---------ANAC58           <---------ZAT14                         <---------ANAC58           --------->ZAT14                         <---------ANAC46 ------>MYB46(1)    <-------------        <---------------AGL15             <---------ANAC46          ------>MYB83       --------------        --------------->AGL15             <---------ANAC58       --------->ANAC46     <---------ANAC46     <-----------GT1               ----------->HVH21 <---------MYB52(1)<-------TEIL   <-------GAMYB -------->YAB1        <------ZmHOX2a(1)   <---------ANAC58   <-----------GT1  <---------AHL20(2)  <--   tatcaatatactgtatagagtataggaattgagttttgtgactggcttagatttcgtttgttattacaccaaatgcatattatatgtgagttgtactaaa  5385700  Previous    Next  AGI:  At5g16490.1    Description:  RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4). similar to RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10) [Arabidopsis thaliana] (TAIR:AT4G04900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22986.1); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 5384308    to: 5385216    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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