Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ALFIN1                                                 <---------At4g35610                                                 --------->At4g35610                                                --------->ANAC58                                              --------->TGA2(2)                                             <-----------TGA1                                             <-----------HVH21                                            ====================================bZIP_DOF                                            <<<<<<<<<<AtbZIP1                                            --------->ANAC58                                            <---------bZIP60(1)                                            --------->bZIP60(1)                                            <---------TGA1a                                            --------->TGA1a                                            <---------O2                                            --------->bZIP60(2)                                            --------->ANAC46                                            --------->ANAC58                                        <                                          <---------ALFIN1                                         --                                     ===========================HOX2a_HOX2a                  <-------                                     ==============================HOX2a_HOX2a             --------->GLK1(2)                                     <------ZmHOX2a(2)                                     --------->ARR14(2)                                     ==================================HOX2a_HOX2a         <---------ARR14(2)       <------ZmHOX2a(2)            <---------ARR11(3)                          ----------->HVH21  <-      <---------ARR11(3)            --------->ARR11(3)      ------>ZmHOX2a(1)   ----------->TGA1  <--      --------->ARR11(3)        ---------->DOF2 --------->ANAC58     <----------DOF2      <---------GLK1(2)    ----------->ARR10           ======================bZIP_DOF  ------>ZmHOX2a(1)  <----------ID1<--- ------DOF2                   <---------YAB1--------->O2 ------>ZmHOX2a(1)   <---------DEAR3(1)<-----   ttcgataagatcatcgtaagtgtaactgaattttgaaagatcagccacgtcagcaactcctccttcctcttctttatcggcgatgacgacgagaatcggc  5350500                                                    <---------DEAR3(1)          <---------YAB1                            --------->DEAR3(1)           <---------ANAC46      <-----------TGA1                              <---------ETT(2)           --------->MYB52(1) ------ZmHOX2a(2)                                <---------O2                 ----------->HVH21 ------->ARR14(2)                        ------->GAMYB                        ----------->TGA1 --DEAR3(1)                          <---------WRKY12                   <-------TEIL --------ARR14(2)                   <------ZmHOX2a(2)               ----------->ARR10 ----NtERF2                        <---------ARR11(3)           --------->HSFC1(2) ------MYB46(3)        <----------DOF2--------->MYB52(1)  ---------->DOF2 <---------At5g28300       - ----LBD16--------->ICU4     ------->GAMYB       --------->O2   <---------HSFC1(2)               <---   ggatcagtcgtcatcatcgagaccgcttcaacggcgagatcaacggagaagacgtcgacgaaaagaagcttagattcacagtgacggagaagaacagaga  5350600              <---------ANAC46                 --------->TOE1(2)              <---------ANAC58               --------->ARR14(2)              <---------ANAC55(1)            <---------ARR14(2)       <-----------HVH21                   --------->LBD16      <---------ANAC58                    --------->DEAR3(1)      <---------ANAC58                    <---------ANAC46     --------->SPL7                      --------->ATERF1(1)     <-------TEIL                        <------NtERF2  <---------ANAC58                       <---------LBD16  <---------ANAC58                      <---------RAP2.3(1)  <---------ANAC46      <-----------RAV1(1)----------->HVH21 <-------TEIL <---------ANAC58        --------->ZAT18             <---------ZAT2        XXXXXXXXXXXXX <---------MYB46(3)    <---------TOE2(3)------>NtERF2             <---------At4g35610<---------ARR14(2) --------->ABI4(2) <-------GAMYB<---------TOE2(3)         <---------ZAT14        <------NtERF2 -------->ALFIN1  --------->ALFIN1<------ZmHOX2a(1)       --------->ZAT14       --------->LBD16 ------DEAR3(1) --------->ALFIN1<---------TOE1(3)       --------->At4g35610   <---------LBD16     <--   cggtgcgtgcgtcgaggcgtgtgttgatgttgttgaggattgcgccggacatgggaacagcaaactggagctcgtacatagccggagtattgggagagag  5350700                                                                                    --------->REM1(2)                                                                                  <-------MYC3                                                                                  ------->MYC2                                                                                  ------->PIF5                                                                                  <-------MYC4                                                                                  ------->MYC4                                                                                  <-------PIF5                                                                                  <-------MYC2                       --------->GLK1(2)                                          ------->MYC3                       <---------ARR14(2)                                        <---------ANAC46                       --------->ARR14(2)             <------NtERF2              <---------TGA1a                      --------->ARR14(2)             --------->LBD16             <---------ANAC55(2)                      <---------ARR14(2)           <-------MYC3                  <--------ABF1                  ------>MYB46(1)                  ------->MYC3                  --------->TGA1a              --------->ARR14(2)                   <---------LBD16               --------->O2          --------->TGA2(2)                       <---------O2                  ------>NtERF2         --------->TOE2(3)                        --------->O2              --------->ANAC55(1)         <-----------HVH21                       ------>NtERF2              --------->ANAC58         <-----------TGA1                       <---------ALFIN1            --------->ANAC58        --------->bZIP60(2)                    ----------->HVH21          <-----------GT1   ---------        --------->ANAC58                      ------>NtERF2--------->MYB52(1)  <---------ALFIN1 <----        --------->ANAC58                     --------->RAP2.6(2)     --------->MYB52(2)<---------DOF5.7(2)        --------->ANAC46  <---------YAB1     --------->ANAC58   <---------TOE2(2)<---------O2   ----- XXXXXXXX>MIR2936 ------>MYB83               --------->ANAC46 =============================MYC_MYB -- -------ZAT14 <---------ARR14(2)             --------->ANAC58 ------->GAMYB --------->ANAC46<--------   aacagagactacgtcagacctgccgattccgattgaagacagagaagacgccacgcggagacaacggaggtttgtttcacgccacgtgtaaacggtgttg  5350800                                       --------->ATERF1(1)                                       <---------At4g35610                                       <------NtERF2                                       --------->At4g35610                                      <---------RRTF1(1)                                      <---------ERF1                                      <---------ATERF1(1)                                      ------>NtERF2                                      <<<<<<<<<AtERF-1                                      <---------RAP2.3(1)                                      <<<<<<<<<AtERF-3                                      <<<<<<<<<AtERF-2                                      <<<<<<<<<AtERF-4                                      <<<<<<<<<AtERF-7                              --------->RAP2.3(1)                                      <<<<<<<<<AtERF-5                              ------>NtERF2                                     <---------ANAC46                              <---------ORA47(2)                                     <---------RRTF1(3)                            --------->LBD16                                     <---------RRTF1(2)                   <---------ANAC46                                     <---------RAP2.6(2)                 <------NtERF2                                     <---------RAP2.3(3)                 --------->ATERF1(1)                                     <---------DEAR3(1)                 ------>NtERF2                                     <---------ANAC58                   <---------ATERF1(1)                                     <---------ATERF1(2)                <---------ERF1                                     <---------RAP2.3(2)                <---------RAP2.3(1)                                     <<<<<<<<<<AtTINY2                 <---------RRTF1(3)                                     --------->ATERF1(2)               <---------ANAC46                                     <---------ANAC58                  --------->DEAR3(1)                                    --------->RAP2.6(3)                <---------DEAR3(1)                                    <------NtERF2                      <---------RAP2.3(2)                                    --------->ATERF1(1)                <---------RAP2.3(3)  <--------                                   --------->ABI4(2)                  <---------ABI4(1)<---------AtLEC2                                   <---------ATERF1(1)              <---------DEAR3(1)------>NtERF2                                  --------->ALFIN1                --------->MYB52(1)<------NtERF2                            <---------WRKY12                      <---------DOF5.7(2)<---------ANAC46                            <---------ARR14(2)                   <---------WRKY12  <---------RAP2.3(1)                            --------->ARR14(2)                   <---------WRKY38(1)--------->ATERF1(1)                           --------->DOF5.7(2)                  <------NtERF2     <---------DEAR3(1)                          --------->At5g28300                   --------->DOF5.7(2)<---------RRTF1(1)                       <---------At5g28300                     <-----------HVH21  <---------RRTF1(3)                      <---------WRKY38(1)                      ------>NtERF2      <---------RAP2.6(2) >ALFIN1     --------------->AtSPL3------>NtERF2         ------>MYB46(1)<---------DEAR4(2)  <-------- -----At4g35610  --------->ZAT14  <---------DEAR3(1)     <---------ARR14(2)       <---------RAP2.3(2) ---->At4g35610  <-------TEIL<---------DOF5.7(2)         ------>MYB83------->GAMYB<---------RRTF1(2) ---->NtERF2 <---------------AtSPL3<---------ERF1        --------->MYB52(1)       <---------RAP2.3(3) ---RAV1(1)  <---------------AtSPL8<---------MYB46(3)    --------->ARR14(2)      <---------LBD16   ctgccataaacgatggaggtacagtcaccgtaaacggtggcggctctctctaaaaaacctatcggcgtcaacggcggcgagtttgcggcgcatggcttca  5350900                 ------>ZmHOX2a(1)               <---------ZAT6              ------>ZmHOX2a(1)              <---------ZAT14                   <---------AHL20(1)              <---------------AGL15          --------->ZAT18                   --------->AHL20(2)      <---------CCA1(2)                 <---------ZAT14              <---------AHL20(2)    <---------ALFIN1        ---------->DOF2  --------->ZAT14      <---------AHL20(2)  ------>ZmHOX2a(1) <---------ZAT6      --------->ZAT14          --------->AHL20(2)          -------- -ANAC58      --------------->AGL15     --------->ZAT18         <---------YAB1 <---------AHL20(2) -ANAC58     <-----------------AGL1<---------ZAT14     <-----------GT1--------->YAB1       --------->ZAT18   tttcctccatctcttcctcctagtggtaatcaaagactctactgtactgtactgttcttactgtttattatataatgacattttatttccaagtgaacaa  5351000      <---------YAB1      ----------->GT1  <-------PIF5  <-------MYC2  ------->MYC2  <-------MYC3                                                                        --------->ZAT2  ------->PIF5                                                                 --------->ARR11(3)  ------->MYC3                                                                --------->YAB1 --------->ANAC46                                                         --------->AHL20(1) --------->TGA1a                                                          <---------AHL20(2)  <------ --------->bZIP60(2)      --------->AHL20(1)                              --------->AHL20(2)  ------- --------->O2             <---------ARR11(3)                        ----------->GT1   --------->At4g35610 <---------O2             <---------AHL20(1)                     --------->ZAT2<---------ARR11(3)  -- <---------TGA1a          --------->ARR11(3)                     --------->At4g35610  <---------At4g35610 --------->ANAC55(2) ------------>CBF               <-----------ARR10    --------->AHL20(2)  -------- ---->CBF      ----------->GT1           <------------CBF     <---------MYB52(1)      <---------ZAT2-   tccacgtgatgaaaaatttgtaaaacaatattttgggtttagaaattgagaacaaatctaaaccattagctggaaattaattatcttcagcttccaccac  5351100                             --------->ANAC46                          --------->ANAC46                       ------>MYB46(1)                       ------>MYB83                       -------->P                      --------->MYB55(1)     --------->YAB1  <---------MYB111(1)  <---------ZAT14    <---------YAB1   <---------MYB46(2)   --------->ZAT18                       <---------AHL20(2)  --------->YAB1     <---------MYB111(2)  <---------SPL7                        --------->AHL20(2) <---------YAB1      <---------MYB59      <---------ZAT18                       <---------YAB1  ----- ---ALFIN1          <---------ANAC55(2)   --------->ZAT14                      --------->AHL20(1) ---->RAV1(1)       --------->ANAC55(2)  <---------ANAC58                      --------->AHL20(2) ------->YAB1      <-----------------------TaNAC69(2)   >>>>>>>>>>>>>>>>>LFY   <---------AHL20(1) ->ANAC46      <---------MYB46(3)        <---------ANAC58------------>CBF     --------->YAB1  <------ -------->AHL20(2)<-----------GT1 --------->MYB46(3)----------------------->TaNAC69(2) --------->ARR11(3)   attataatcatagacatttgttacctaccctacacaaccactagcgtactaagtcttaaaccaatgttcgaaactactaaatataattagatgttgattt  5351200                                                  ---------->DOF2                   --------->AtMYB61           --------->ANAC58                 ------>NtERF2                 --------->ANAC58           <---------YAB1        <---------YAB1                     <-----------HVH21          --------->YAB1         --------      ----------->GT1               <---------At4g35610     <---------AHL20(2)             <---------GLK1(2)    <------------CBF     <----------DOF2  ------>ZmHOX2a(2) --------->AHL20(2)  --------->ANAC46 ---->YAB1      --------->ANAC46    --------->At4g35610   --------->TOE2(3)     --------->ANAC58 ---WOX13(1) --------->ANAC46<----------DOF2  --------->WOX13(1)--------->YAB1  --------->ANAC58   ataatgtattgttattcgacaccacaactttctttgtttgctgatcgtcactcaaagtcacattaattgtaatcttactattacgccaatatagattgtt  5351300                                                                          ------>ZmHOX2a(2)                                                                        --------->ARR11(3)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                        <---------ARR11(3)                                                                        <---------AGP1                                                                      <---------MYB46(3)                                                                   <------MYB83   <---------ANAC58                                                                   <------MYB46(1)<---------ANAC46                                                                   <---------ANAC46                                      --------->RVE1(1)           --------->MYB111(1)                                      --------->CCA1(1)           <---------MYB46(3)                                  --------->AHL20(2)              <---------AtMYB61                          <---------KAN4(2)                       --------->MYB46(2)              ----------->GT1  --------->TOE1(3)                  --------->MYB55(2)             --------->DAG2    --------->TOE2(3)                  --------->MYB111(2)    ----------->GT1 --->GT1    ---------->DOF2 <-----------GT1 <----------DOF2    --------->ATHB12   <---------ANAC58  -   aaacaaacaaacaaaaaagtttatagagaataaccttaaaatatcgcttaatctcgttgcaatattgtttggtggatctaaatgtcgtatgtggtaattt  5351400  Previous    Next  AGI:  At5g16340.1    Description:  AMP-binding protein, putative. similar to AMP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G16370.1); similar to AMP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G75960.1); similar to AMP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G21530.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO22162.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64147.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22160.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) Range:  from: 5349097    to: 5350910    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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