Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ANAC46                         ---------->DOF2                           <---------ANAC58                     ----------------->AGL1                        <---------ANAC58                   <---------ARR14(2)     --------->LBD16         <---------------AtSPL8                   --------->ARR14(2)     ------>ZmHOX2a(1)       <-----------------------TaNAC69(2)           <----------DOF2       --------->ANAC58   <---------ARR11(3)          <---------ANAC58       --------->ANAC58   <---------ARR14(2)                   --------->ZAT14          <---------ANAC46   <------ZmHOX2a(1)      --------->ARR11(3)                   <---------ZAT18 -----TOE2(3)<---------WRKY18(1) --------->ANAC46   --------->ARR14(2)<-------TEIL<---------WRKY18(1) ---->DOF2<---------ANAC58 <---------TOE2(3)  <------ZmHOX2a(1)   --------------->AtSPL3 <---------ZAT14   agttgcagaatggcttgagcgtttccacaaaggataagccattcctgaggaaagtatcttcaacaagaggcgtacatagaaccatgaccactggactaat  5331300                                       <---------ALFIN1                                     <---------ATERF1(1)                                     ------>NtERF2                                    <---------TCP20                                    <---------TCP16(1)                                    --------->PCF2                                  <---------ATERF1(1)                                 --------->DEAR3(1)                                <---------LBD16     <---------MYB52(1)                             --------->ZAT18       <---------SPL7                       ------->TEIL                             --------->ZAT14      <---------ANAC58                      <-----------ARR10                   --------->ANAC58 --------->ARR14(2)                                 <---------CCA1(2)           <----------TaMYB80<---------ZAT14      <---------ANAC58             --------->ZAT14 ------>ZmHOX2a(1) --------->ANAC58 <---------ARR14(2)                         <---------ZAT14   ttcctccaatagcattttcccaagcgaagagttcaccggctccaccattcttccgttcgcttaactagtctctcaaacctcttcactgtgtatctaatcc  5331400                                                                                            <------NtERF2                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                         <---------At4g35610                                                                                         <------NtERF2                                                                                         --------->ATERF1(1)                                                                                        <---------ATERF1(1)                                                                                        ------>NtERF2                                                                                        <---------DEAR3(2)                                                                                       <---------DEAR3(1)                                                                                      <------NtERF2                                                                                      --------->ATERF1(1)                                                                                    <---------DEAR3(1)                                                                                   --------->ATERF1(1)                                                                                  <-----------HVH21                                                                                  <---------ATERF1(1)                                                                                  ------>NtERF2------                          <------NtERF2                     --------->ANAC46     --------->DEAR3(1)                         <---------ORA47(2)           <----------DOF2           --------->ATERF1(1)                         <---------DEAR3(2)          <---------DAG2             --------->RAP2.3(1)                         <---------DEAR4(2)       <---------ALFIN1              <------NtERF2--------                        --------->ALFIN1       ------>ZmHOX2a(2)               ------>NtERF2<--------                        <---------DEAR3(1)    <---------GLK1(1)                <---------ATERF1(1)                        <---------DREB2C(2)   --------->GLK1(1)               <---------DEAR3(1)                       <---------ABI4(1)      <------ZmHOX2a(2)            ----------->HVH21---------                       <------NtERF2         <---------ARR11(3)        <---------ZAT2<---------SPL7                     <---------DEAR3(1)      --------->ARR14(2)        --------->At4g35610  ---------              --------->ARR11(3)             <---------ARR14(2)        <---------At4g35610 <---------ATERF1(1)              <---------ARR11(3)             --------->ARR11(3)        --------->ZAT2<---------ATERF1(1)              <---------GLK1(2)              <---------AGP1 --------->ANAC58  --------->DEAR3(1)  ---            ----------->ARR10            --------->TOE2(3)  --------->ANAC58  --------->ANAC46 ------     <-----------HVH21 --------->ATERF1(1)  <---------CCA1(2)    --------->MYB52(1)<------NtERF2<----   gatttcaggtcggatagattttggaggcggtgcgattcaataacctagatctccacctttttaagccaatcggagctacgacgccgtcgtcggcagctgc  5331500          <------MYB83 >At4g35610             --------->GLK1(1) -ZAT2    <------MYB46(1)--------->MYB52(1) -At4g35610             <---------GLK1(1)                                     <-----------GT1 --->MYB52(1)          <---------ARR11(3)                               <---------ANAC58 ->ATERF1(1)   <------ZmHOX2a(1)        <---------ANAC46                <---------ANAC58 -ATERF1(1)   <------MYB46(1)      --------->ATHB12                  <---------DEAR3(1) >ATERF1(1)   <------MYB83         -------->HAHB4                   <---------ZAT14         ------>ZmHOX2a(2) >ZAT2<---------REM1(1)--------->ARR11(3)                           --------->SPL7--------->LBD16   - ------>LBD16--------->MYB59 --------->At5g28300                    --------->ZAT14    <---------KAN4(2) >NtERF2 --------->MYB59--------->CCA1(2)                         <---------SPL7<---------LBD16     - -----LBD16 <--------P <---------ARR14(2)               ---------->DOF2 <---------ANAC46 --------->ATHB12   cggacttgatgtaggtaggaatgaagatatcggtaaatgatggagtatgtagaatggagaaagcagtcagtacggcgtattaaccggagaatgatcggat  5331600                                                                                              xxxxxxx                                                                                             xxxxxxxx                                                                                           xxxxxxxxxx                                                                                           xxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                <---------ARR11(3)                                                      *TSS xxxxxxxx            ------>ZmHOX2a(2)                                                           -------------          --------->ARR14(2)                     --------->ATHB12                  ----------->GT1          <---------ARR14(2)              ---------->DOF2        <------ZmHOX2a(1)-------------------      <---------LBD16<---------ANAC46  --------->ANAC58   --------->CCA1(2)    ----------->RAV1(1) ----->ZmHOX2a(2)<------ZmHOX2a(2)     --------->ANAC58  --------->ARR14(2) --------->ANAC58xxxxxxxxx -------->YAB1  --------->ARR14(2) <---------REM1(1)     <---------ARR14(2) --------->ANAC58xxxxxxxxx   gatcgtaatcgggatcgagatcgacgtagagggagagatgtaggcaaagttcgattggagatttggaggagagtcgacgagcaacatgaaaaaaaaaaaa  5331700          ------------>CBF xxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxx>smallRNA(si3) xxxxxxxxxx>smallRNA(le3) xxxxxxxxx>smallRNA(le3) xxxxxxxxxx>smallRNA(si3) xxxxxxxx>smallRNA(le3)                     ----------------->AGL3 <---------ARR11(3) xxxxxxxxx>smallRNA(si3)                 ---------->ID1       ------------>CBF xxxxxxxxxxxx>smallRNA(le3)         ------->TEIL             <-----------GT1 ----------->ANAC81              --------->ANAC55(2) ----------->GT1          ----------->GT1 ----->ANAC81                    <---------ANAC55(2)<---------TOE2(3) <-----------GT1               - xxxxxxxxxxxx>smallRNA(si3)     --------->MYB59     --------->MYB59<---------AHL20(1)      --------->ZAT18 xxxxxxxxxxx>smallRNA(le3)<---------AHL20(2)<-----------------AGL3 --------->AHL20(1)      --------->At4g35610   aaaaaaaaaaaaaacaatttccatctatttaagttatgtatttggccctatatttaggtaaaattacaatattttccaaatagtttaaaaatgtgctcaa  5331800                                      --------->ANAC46                                 <---------ICU4                               --------->ANAC58                                 --------->YAB1                    ---------->DOF2       --------->MYB52(1)                                --------->ICU4        <---------ARR11(3)      --------->ANAC58                         ---------->DOF2            --------->ANAC58      --------->ANAC58           ------>ZmHOX2a(2)  --------->YAB1        --------->ANAC58      --------->ANAC58--------->RAP2.6(3) -------->At4g35610    --------->TOE2(3)            --------->ANAC46--------->DAG2 ----------->GT1   tgagcttcagtgatcgatatggaaacctaaagtcataatcacaccagaaaattcaagacattttggtcataaagggaagcaaggaaggaaaaaacggcca  5331900                          --------->YAB1                      --------->ARR11(3)                      ---------->DOF2    <---------ATHB12  <---------ALFIN1                  <xxxxxxxxxxxxxxxsmallRNA(le3)   --------->ZAT6             <---------ANAC46       --------->ANAC58    --------->ARR14(2)             ----------->GT1        --------->ANAC58    <---------ARR14(2)            --------->MYB59 <---------YAB1  <---------TOE2(3) <---------ARR11(3)     --------->YAB1   tcttccaacgtagtgaggtaaactaaaagcataatagcaagtaatcaaggtaacaccagaaccacatcttgaaacttggagaaacaaatatagttgatgg  5332000                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                   --------->MYB52(1)         -------                                                                 --------->MYB46(3)           -------       ----------->GT1                                   --------->LBD16                      -------      <---------TOE2(3)                                 <---------HSFB2a(2)          <---------ATHB12 --------->ANAC58               --------->YAB1         <---------LBD16   <---------ARR11(3)  -------- --------->ANAC58              <---------ATHB12       <---------LBD16   <------ZmHOX2a(1)    <-------   aagaagcaaaggttacattatgcattggcactaatcaaatttgaatagagattaaactcgggaaataacaaacaggatatatatccaatggatttagccg  5332100       ===================RAV       ----------->RAV1(1)    --------->ANAC58    --------->ANAC58  ---------->DOF2 ------->LBD16 ---->NtERF2 ------>DEAR3(1) ---NtERF2 -----ATERF1(1)                <-----------HVH21 ->NtERF2                  <---------ANAC58 --->RAP2.3(2)             <---------ANAC58 --->RAP2.6(2)             <---------ANAC46 --->DEAR3(1)         <------MYB46(1)                             --------->YAB1 -->ATERF1(1)         <------MYB83                               <------ZmHOX2a(2)             <----- -->ERF1 --------->REM1(1) <---------LBD16                       <---------YAB1                <----- -->MYB46(3)         <---------AtMYB61                          <---------ARR11(3)            ------- ->At4g35610         --------->MYB59                       <---------ZAT18          <<<<<<<<<TBF1 --At4g35610  ----------->RAV1(2)  <---------ANAC46        --------->ZAT18  --------->MYB46(3)<------   ccgagaaagcaacatcatctggtttggtttcggggtcatgtgtaaacagtcttggacatagcacacgatcataaaacaacaacttcttcttcaacttgct  5332200  Previous    Next  AGI:  At5g16280.1    Description:  binding. similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67015.1); similar to hypothetical protein OsI_013334 [Oryza sativa (indica cultivar-group)] (GB:EAY92101.1); contains domain PTHR12975 (PTHR12975) Range:  from: 5323178    to: 5331688    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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