Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ATHB12   <---------YAB1   --------->ICU4 --------->YAB1 ------->ARR11(3) -------GLK1(1) ------>GLK1(1) ---WOX13(1)                        --------->AHL20(2) >ATHB12--------->ATHB12        --------->AHL20(2)                   <---------At4g35610          <-- >YAB1 <-------TEIL      <---------ETT(2)                     <----------DOF2       --------->YAB1<--   atatcatgattcattgtgtaatgtctttcgacaattgaataaatccactactagttgagagtctcttttgaagatgacacatctattaataacccatatt  5306400                                                                 --------->bZIP60(1)                                                                 <---------bZIP60(1)                                                               --------->REM1(2)                                                             <---------RAP2.6(3)                                                          ------>NtERF2                                                          --------->At4g35610                                                          <---------At4g35610             --------->ZAT2                           --------->AtLEC2                     <---------             <---------ZAT2                         <---------ANAC58                    <---------ANAC58   ---------->DOF2                                  <---------ANAC46                    <---------ANAC58 -------ANAC58           <-----------HVH21          <---------AtLEC2          XXXXXXXXXXXXXXXXXXXX>MIR861-5P -------ANAC58    <------ZmHOX2a(1)                 <---------ANAC58   ---------->DOF2 <-------TEIL   gtttgcaaagcatggagctaggagcatggtcacaactattaagagattgtagttgcatgcagccgtgatgacataaagacttggagaaattcgtgtcata  5306500                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <---------ANAC55(2)                                                                                 <---------ANAC46                                                                                 ----------->GT1                                                                                 --------->ANAC55(2)                                                                        <------ZmHOX2a(2)                                                                       --------->ARR14(3)                                                                       <---------ARR14(3)                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                      --------->RVE1(1)                                                                   ---------->DOF2      <---------YAB1                        <---------ETT(2)                  <-----------HVH21    <---------ANAC46                        <---------bZIP60(1)               <-----------TGA1    ---------->ID1       --                        <----------ID1                    <---------RAP2.6(3)<-----------HVH21   <---                        --------->bZIP60(1)        --------------->AtSPL8   <-----------RAV1(1) <----  ----------->GT1    ----------->TGA1              <---------------AtSPL3------>ZmHOX2a(2)      <---- --HVH21      <---------YAB1       ----------->HVH21   <---------At5g28300<----------DOF2 --------->ARR11(3)   agaagagtttattgttatgagttatgacgacaattcagtgacacatgaattgttttgtaccgtcatactaaaagatctttgtcgcgtaatatgattttgc  5306600                                                 --------->DEAR3(1)                                                 --------->ATERF1(1)                                                --------->ATERF1(1)                                                <---------At4g35610                  --------->ANAC58           --------->At4g35610        <---------ICU4                    <---------At4g35610        --------->ATHB12                  --------->At4g35610       --------->ICU4  --------->ANAC58   <---------ZAT2       <---------YAB1  --------->ANAC58   --------->ZAT2                     ----------->RAV1(1) --------->HVH21  --------->ANAC46<---------ANAC58 ------>NtERF2<----------DOF2 -------DOF2      <----------ID1  <---------ANAC46--------->RAP2.6(2)       <----------ID1 -----ANAC58      --------->ANAC58<---------ANAC58--------->DEAR3(1)      --------->MYB52(1)       -- -----ANAC58 <---------YAB1     <-----------GT1 --------->At4g35610     <---------MYB52(2)      -----   tttgacagcatgattacaatacgacaagcattttttgcgtttcaagctgcagcggcccatgggcctctttaacaaataacgacagaagtagacaaaacag  5306700                                                                                       --------->ANAC58                      --------->YAB1                                                   --------->ANAC58                      --------->AHL20(2)                                               <---------ALFIN1                ----------->GT1--------->TOE1(2)                              <---------ICU4                <---------TGA2(1)                                            <---------ATHB12 -------->DOF2  <---------bZIP60(1)                                          --------->ICU4 ------>GT1     --------->bZIP60(1)                                      ------------>CBF<---------ALFIN1   gtaaagaaaatggcagtgatgtaataaaaaaaacctagaagggacatttaagagactttcaaacagagtcgtttatgcaataaatgcacacacacttgct  5306800             --------->LBD16            <---------HSFB2a(2)                                                 --------->TOE2(3)            --------->HSFB2a(2)                                        --------->At4g35610          *TSS                                               <----------DOF2 ------>ZmHOX2a(1)       <---------ANAC55(2)                              <----------DOF2<---------At4g35610     <-----------GT1                                  <------------------------ANAC81  <---------ICU4                                  <---------DAG2 <---------ANAC58               -----  --------->YAB1                               <-----------GT1   <---------ANAC58            <------- --------->ICU4                   ------>ZmHOX2a(2)<----------DOF2<----------DOF2      <-------TEIL   gaaataatcacgttccagagagttttctgaaattgatcgttttggttcttcacctttccttttctttgctttctgcttcctcccttaaatacatttcact  5306900                                       <---------YAB1                                  <------------------------ANAC81                                --------->YAB1                          --------->TOE2(3)    --------->YAB1      <---------ARR11(3)     <----------DOF2                                    ---   <---------YAB1       --------->ARR11(3)   ---------->ID1      <---------ANAC46                 === ---------------->WRI1 <---------CCA1(2)<------------------------ANAC81           --------->YAB1----- ----GT1    <---------AHL20(2)  --------->TOE2(3)  <-----------GT1 <---------MYB52(1)           <----   ctgttatcatcgatttttttttcttatatctcaatcttattttgtttgtcttttctccatttttgtttcgttaagaagaaacaatggttatggctatgga  5307000          ---------->ID1                                                         --------->ZAT6      <----------DOF2                                                            <-----------GT1      --------------------->WRI1                                         --------->LBD16   ------>ZmHOX2a(2)                                                    --------->HSFB2a(2)   =======================HOX2a_HOX2a                              --------->HSFB2a(1)  ========================HOX2a_HOX2a                             --------->ARR14(2)  <------ZmHOX2a(2)                                               <---------ARR11(3) <---------ARR14(2)                       <-----------ARR10       --------->ARR11(3) --------->ARR14(2)               <---------ICU4                  <---------ARR11(1) --->ZmHOX2a(2)                   --------->YAB1      <---------YAB1    <---------HSFB2a(2) =========================HOX2a_HOX2a     --------->ARR14(2)      <-----------ARR10 ---->ARR14(2)                   <---------YAB1 <---------YAB1    <---------ARR14(2) -----ARR14(2)     ------>ZmHOX2a(1)      <---------ARR14(2)     <---------CCA1(2)   tcggatcgctttgttctcttcctcatcatctgtttatcatcacggttcttctcattctcatggctccaaatcttccagagttttcactattcgttccgac  5307100                                                                                       --------->LBD16                                    <---------AHL20(2)                               <---------LBD16                                <---------YAB1                                 <---------MYB52(1)                             --------->GLK1(2)                               <---------ANAC58                        --------->LBD16                                      <---------ANAC58     --------->MYB52(2)--------->HSFB2a(2)                             <---------TOE1(3)   <--------- --------->ANAC55(2)   <---------HSFC1(1)                      ------>ZmHOX2a(1)  <----------DOF2 --------->ANAC46      <---------HSFB2a(2)         --------->LBD16     <---------TOE2(3) <---------ANAC46 --------->O2          --------->HSFC1(1)<-----------GT1   <-----------GT1<---------ARR14(2)   <-----   tctacgtgagtttctctcttcatttccagaaattctgtttatttttctgtttccccaaaattttcctgattttgaggtttcgttctttctggggtttaag  5307200                     <---------TOE2(3)                     <---------YAB1                    <<<<<<<<<<<<<<<<<LFY                    <-----------GT1                  <---------YAB1                <--------HAHB4                <---------ICU4                --------->ATHB51               --------->ICU4               <---------YAB1             <--------HAHB4             <---------ICU4                                                          <---------ANAC58             --------->YAB1                                                          <---------ANAC58            --------->ICU4                                                         <-----------GT1           --------->ARR11(3)                                                   <---------AHL20(2)           <---------ARR11(3)                                                  --------->AHL20(2)          --------->YAB1     <----------DOF2            --------->YAB1       <---------ARR14(2)------ -DOF2   --------->ICU4     <---------ANAC58   ------>ZmHOX2a(1)    <---------AHL20(2)    <---------ANAC46 ----TOE2(3)<---------YAB1  <---------ANAC58 ----------->RAV1(2)    --------->AHL20(2) <---------MYB52(1)   tttgttcagcgatgatcattattaacattggctttttatatgcaatctcctgcttctatcaaatttgtatttaaatgcagatttatttcgttctgtgatt  5307300  Previous    Next  AGI:  At5g16240.1    Description:  acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative. similar to acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative [Arabidopsis thaliana] (TAIR:AT3G02630.1); similar to stearoyl-acyl carrier protein desaturase [Linum usitatissimum] (GB:CAA07349.1); contains InterPro domain Ribonucleotide reductase-related; (InterPro:IPR012348); contains InterPro domain Fatty acid desaturase, type 2; (InterPro:IPR005067); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) Range:  from: 5306810    to: 5309935    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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