Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ALFIN1          <-----------GT1         <---------CCA1(2)      <---------MYB52(1)                             <---------YAB1     <-------GAMYB                                   <---------TOE2(3)                   ------->GAMYB    ----------->GT1                         <-------GAMYB              --------->YAB1    ----------->GT1 -----ARR14(2)                             ----------->GT1    <-------TEIL            ----------->RAV1(1) ---->ARR14(2)                       <---------YAB1  <---------TOE1(3)<-------TEIL ------->GAMYB   actgctcggttatatccacctctcaccaaggtgttcaatgtgattcggttaaattaagattagattcaaatattcatattttcaacagcaacagaaaaaa  5277500                                                                                         ------>ZmHOX2a(1)                          <---------At4g35610                                        <-----------HVH21                      --------->TOE2(3)                  <---------------AGL15   --------->ANAC46                   ------>NtERF2                         --------------->AGL15 <---------ALFIN1               --------->ANAC58                         <---------ANAC58      <---------ZAT18    ----               --------->ANAC46                         <---------ANAC58      --------->ZAT14    ----               --------->ANAC58    <-----------GT1   <---------MYB52(1)       <---------ZAT14    ----        <-----------GT1<---------MYB52(1)    --------->YAB1              --------------------->WRI1   aaacatattttgacaacatgccacccttagcttattttgacaacatatcatcacccttacttgaaattgcaatctcttactacactccgtcctatgggca  5277600                                        --------->TOE2(3)                                        --------->TOE1(2)                                        --------->TOE2(2)                                 ------>ZmHOX2a(2)                           --------->AHL20(1)         --------->TOE2(3)      <------ZmHOX2a(2)                 <-------GAMYB  <---------AHL20(2)            --------->CCA1(2)                ----------->GT1 --------->AHL20(2)            <---------ARR11(3)                ------>ZmHOX2a(2) ------->GT1                   --------->ARR11(3)    <---------MYB59         --------->ARR11(3)   === ----->ANAC58                  --------->AGP1      ------->TEIL<---------ARR11(3)   <---------At4g35610 ----->ANAC58   ----------->GT1<---------AGP1     <---------CCA1(2)      <-------TEIL             ---   agataaaatttcgtcaaatcgtgtaaatgttaagatctaaaacctaagttttgtatctaacacatgatcgttatatacatatattgacctgagaacaact  5277700             --------->ANAC55(2)             <---------O2             ==================================bZIP_DOF             --------->ANAC58             --------->TGA1a             <---------ANAC55(2)             <---------TGA1a             --------->O2          ----------->HVH21                                                       --------->WRKY38(1)         <-----------HVH21                                                    <---------TOE2(3)        --------->ANAC46                          --------->AHL20(2)<---------At4g35610      --------        --------->bZIP60(2)                       <---------AHL20(2)--------->GLK1(1)        --------   <---------WRKY38(1)                       <-------TEIL           <---------GLK1(1)------------>CBF ======================bZIP_DOF       --------->AHL20(2) <---------ANAC58   ----------->HVH21-------- ------->DOF2--------->ANAC58       <----------DOF2      <---------ANAC58<----------DOF2  --------->ZAT14   aaaagtcaacaggtcacgtcttcgttccaaagtctactcttttaatatacatttatataacttgcaagagagctccttttgacgttgtccaatacactcc  5277800                                                                            -------->P                                                                          --------->MYB46(3)                                                                      *TSS<---------MYB111(2)                                                                     --------->YAB1                                                                    <------ZmHOX2a(2)                                                                  ------->GAMYB                                                               <---------DOF5.7(2)                                                               --------->MYB52(1)                                           --------->MYB46(3)------>ZmHOX2a(1)                                      --------->YAB1         ==============HOX2a_HOX2a ->ANAC58                     <-----------GT1     <--------P--------->TOE1(3)                 <------ ->ANAC46                  --------->YAB1<-----------GT1    --------->TOE2(3)            <----------DOF2 ->ANAC58               ----------->GT1  --------->YAB1  <---------ARR11(3)------->GAMYB<------------   aaaaaccttgttttttcttatacaacttgtaataacacatttataacaactggttgcaaaatccttaacgatcacaacaacctctctctctctttttctc  5277900                                                                           --------->YAB1                                                                           <---------ICU4                                                                          <---------ATHB12                                        --------->YAB1          --------->ZAT6   ---------->DOF2                                       <---------YAB1      >>>>>>>>>TBF1  --------->ICU4                           --------->YAB1           ---------->DOF2   --------->MYB46(3) -----GT1         --------->ZAT6    <---------ZAT6--------->ANAC58   --------->ANAC58            <--- ------------ANAC81  --------------->AGL15        --------->ANAC58   --------->ANAC58         <------   tctctccctctccctctctatctctacaatgagcattagtgatcataagagcaagaaagaagaagaacagtacccaatgatcacaaagcccttgagattg  5278000                                                            <------MYB46(1)                                                            <------MYB83                                                           <---------MYB46(3)                   -----                                                           <---------AtMYB61                    <----                                                          <---------MYB55(1)              <---------SPL7                              --------->ZAT18             <--------P                     --------->RAP2.6(2)          --------->DAG2      <---------ZAT18             <---------MYB52(1)            <------------        ---------->DOF2     --------->At4g35610          <-------GAMYB              ---------->DOF2 ------GLK1(2)              <---------At4g35610   --------->ARR14(2)  <----------DOF2   ------------- ---WOX13(1)       --------->MYB59  <----------DOF2     <---------MYB46(3)       <---------MYB52(2)   attctcttacaaaagggaagttatgtcttaagctcactcttttttgtattcggtttctcggttggtctcttcctttgtctgcaactaaaagccgtacaca  5278100                                                                ----------->RAV1(1)                                                             --------->ANAC46                                                             --------->ANAC58                                                             --------->ANAC58                                                             <---------ALFIN1                                                           <---------ALFIN1                                                          <---------WRKY38(1)                                                          <---------ZAT18                  ------->GAMYB                       --------->ANAC46               --------->MYB52(1)                     --------->ANAC58          ----------->RAV1(1)                     --------->AtMYB61         --------->bZIP60(1)                      ------->GAMYB --------->AtMYB61       ------>NtERF2                              <---------ALFIN1      --------->DEAR3(1)                       <-----------GT1 --------->ANAC46   --------->ANAC46 --------->MYB46(3)   <---------YAB1   <---------ETT(2) -->MYC3 <---------bZIP60(1)         <---------DAG2 <---------ALFIN1 ---MYC3 --------->ANAC46            <---------MYB59--------->MYB52(1) -----------TaNAC69(2)               --------->TOE2(3)--------->ANAC58      <---------GLK1(1) -->AtSPL3------>NtERF2          --------->ETT(2)--------->MYB46(3)         --------->GLK1(1)      <-   tgtctacgacgacgacacaacgacaacccttatggtctaccttattattcaaccacacggtccacaccacagagatggatatcaaacaagagttgcaact  5278200                                                                                        <---------YAB1                                                                                      <---------ICU4                                                                                      --------->YAB1                                                        --------->YAB1               <---------YAB1                                                        <---------ICU4             <---------ICU4                                                       <---------YAB1              --------->YAB1                                                     <---------ICU4           <-----------TGA1                                                    --------->ICU4       ------>ZmHOX2a(1)                 <---------YAB1                     <---------YAB1      --------->TOE2(3)             ----------->RAV1(1)                <-----------TGA1------>MYB46(1)   <---------YAB1            --------->ANAC46                   --------->O2     ------>MYB83 --------->YAB1          --------->ANAC46                    <------NtERF2    ----------->RAV1(1)--------->ICU4 --------------AtSPL3        <---------ARR11(3)--------->bZIP60(2)    <---------YAB1 --------->ICU4<-   acaagtacttcaacacaacatgagtgatcaagaactcttcaccaaggcctcgtcattatcatcaccaacatcatccttatcgtcatcatcatggttaggg  5278300            --------->YAB1            -------->HAHB4                                                             --------->DAG2            --------->ATHB12                                                   --------->ALFIN1            <---------ICU4                                                    <----------DOF2           --------->ICU4                                                    <---------ANAC46           <---------YAB1             <----------DOF2                        <---------ANAC58         <---------ICU4              <---------ANAC58                        <---------ANAC58         -------->HAHB4              <---------ANAC58        <---------HSFB2a(1)      ---------->DOF2         --------->YAB1              <---------ANAC46   --------->ALFIN1 <---------ANAC58    <-------        --------->ICU4              <------NtERF2   <-----------RAV1(2)  <---------ANAC58 <---------ARR11(3)      --------->YAB1           <---------AtMYB61 ----------->HVH21     <---------MYB46(3) --------->ARR11(3) -----ZmHOX2a(1)            ----------->HVH21 <-------TEIL   --------->HSFB2a(1) <---------ANAC46   <   aggagacataataatgatgggaagatggctgtgaaggtggctttcatgttcatgacaggtggaagactcccattggctggcttgtgggaaaagttctttg  5278400  Previous    Next  AGI:  At5g16170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49350.1); contains InterPro domain Protein of unknown function DUF266, plant (InterPro:IPR004949) Range:  from: 5277870    to: 5279821    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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