Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->AHL20(2)                                                                <---------AHL20(2)                                                               <---------AHL20(1)                                                               <---------AHL20(2)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                            --------->AHL20(1)                                                            <---------AHL20(1)                            <---------ARR14(2)       <-----------HVH21 ---------At4g35610         --------->ARR14(2)    <---------ANAC58     <----------DOF2 -------->At4g35610         <---------ARR11(3)    <---------ANAC58  <---------AHL20(2) ----ZmHOX2a(1)    --------->ANAC46       ----------->GT1  --------->AHL20(2)  --------->ATHB51 -DOF2   ----------->GT1   <---------CCA1(2)     <-------TEIL  --------->AHL20(2)             <------ ----->AGL1   <-----------GT1           <------ZmHOX2a(1)  <---------AHL20(2)  <---------AHL20(2)  <-   ggagcagagaattgtttaacttcgcaactatatctgcaagtaggatgtaaattcgtgtcaaataaattattttcttttgaataatttgcaaatttagtgt  5268000                                           --------->ANAC58                                         ---------->DOF2                                   <---------------------WRI1                                  <-----------HVH21                                  <-----------TGA1                                 --------->ANAC58                                 ===================bZIP_DOF                                 ===================bZIP_DOF                                 --------->O2                                 <---------TGA2(1)                                 <---------O2 ---------->DOF2                                 <---------bZIP60(1)                                 --------->bZIP60(2)                                 --------->bZIP60(1)               <---------AHL20(2)                                 --------->ANAC58                <---------AHL20(2)        <---------AtLEC2         --------->TGA1a                <---------AHL20(1)        <---------ANAC58         <---------TGA1a --------->YAB1 --------->AHL20(1)   ---------->DOF2      <---------YAB1             --------->TGA2(1)<---------ARR11(3) <---------AHL20(2)  <---------ARR11(3) ---ZAT6<---------ANAC58    <---------YAB1 --------->ANAC58    <---------AHL20(2)---------->DOF2 --------At4g35610   <---------YAB1--------->TGA2(2)     ----------->GT1      --------->YAB1   catcttctatgcttggataagttatgacttatgagacgtcagtgaaagcaaagatagtattgtatatatatttttttttatcagaaagaaagatagtatt  5268100                                                                                                  ---                                                                                            ---------                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                          --------->AHL20(2)                                                                      ----------->GT1  --------->AHL20(2)                                                                    ---------->DOF2    <---------AHL20(2)                                                                  --------->ANAC58    <---------AHL20(1)                                                                  --------->ANAC58    --------->AHL20(2)                               <-------TEIL                  <---------WRKY18(1)      <---------AHL20(2)                     ----------->GT1                        --------->WRKY38(1)       --------->AHL20(1)   ----------->GT1 ---------->DOF2                          --------->WRKY12     --------->AHL20(2)   gtagtcggaaaaaaacttagcgaaagttaaacatccatatatcacacactaattctataacattgaccaagaaagtaatatgtataaataaaattaataa  5268200                                                 --------->ANAC46                                                 --------->ANAC58                                                 --------->ANAC58                                     --------->ARR11(3)                                     --------->AHL20(1)                  <-----------GT1                                     <---------AHL20(1)                 <-----------GT1                                   --------->AHL20(1)             <---------AHL20(2)              <---------AHL20(2)   <---------AHL20(1)             --------->AHL20(2)             --------->AHL20(1)    --------->ARR11(3)     --------->ARR14(2)             <---------AHL20(1)    <---------ARR11(3)     <---------ARR14(2)         --------->ZAT18 ------>TOE2(3)                 --------->AHL20(2)       <---------CCA1(2)   <----------DOF2 >YAB1<---------TOE2(3)        --------->YAB1   --------->LBD16  --------->AHL20(2)  <-------TEIL <--   ccaaaattgaagttatatattttgttagtagaataaaaatattttgtttccacgaactcatatctgatttaattttagccttttaggtgcattaagcatt  5268300                                                                                  <------MYB83                                                                                  <------MYB46(1)                      <---------ARR14(2)                                         --------->MYB59                  <---------LBD16                                             <---------ARR14(2)                 <---------ANAC58                                          <---------------AGL15                 --------->MYB52(2)                                       <-----------------AGL3                 <---------ANAC58                                         ----------------->AGL2                 <---------ANAC46                                         <-----------------AGL1                <---------AtMYB61                                         ----------------->AGL1                <-------TEIL                     <---------ANAC58         ----------------->AGL3             <---------ANAC58                    <---------ANAC58      ------->GAMYB             <---------ANAC58                    --------->ANAC55(2)  --------->MYB46(3)             <------MYB83                      --------->MYB52(1)   --------->MYB52(1)            <---------MYB46(3)               <---------ANAC58       <-----------GT1        <-----------RAV1(1)                  <---------ANAC58  <---------DAG2 --------->ARR14(2)       <---------TOE2(3)              <-------TEIL    <----------DOF2<---------At5g28300 ---------GT1<------MYB46(1)   ----------->GT1<---------SPL7 ------->TEIL <-----------------AGL2   tttcaaactaatgttgggttcgtggaaacgagtttgtaaatacatgggcttacgggctttaagaaccttttaacggcccatatttggtcacattcgaaac  5268400                           --------->TOE2(3)          --------->ZAT2   --------->LBD16                   --------->YAB1                     <---------At4g35610 --------->ANAC58                   <---------ICU4                     --------->At4g35610 --------->ANAC58                  <---------ATHB12                    <---------ZAT2  --------->RAP2.3(2)             --------->TOE1(3)                       --------->ALFIN1 --------->RAP2.6(2)             --------->TOE2(3)                      <---------ZAT14  --------->RAP2.3(1)     --------->TOE2(3)  *TSS              <-----------GT1      <------ZmHOX2a(1)        --------->WOX13(1)   aaggctaccttgaaaccctaatcatcgaacattaaaacctgattttactgaaactgtgctgcgaaggagaagccgcaaaccattttttgtcaatctaggg  5268500                                        <--------P                                                  <                        ------>NtERF2   <---------MYB52(1)                                    <------                       --------->DEAR3(1) --------->MYB52(2)                                  <------                 --------->GLK1(1)     <-------GAMYB                                          <------                <---------ARR14(2)     --------->At5g28300                                   --------         <---------ANAC58       --------->ZAT6                                          <---------TOE2(3)         <---------ANAC58   <---------MYB52(1)                                  --------->LBD16    -- <<<<<<<<<TBF1  --------->ARR14(2)   <---------TOE2(3)          ------>ZmHOX2a(1)<---------MYB52(1)<-   ttcttcttcgtacttgcagatttcgcctccgttttcactacggttagtcgcaaatagttgatattcctcatactctcttgtccgtagttttatgttgagt  5268600                                   <----------DOF2                                   <---------DAG2              <---------WOX13(1) ---------GLK1(1)              <---------ZAT18        --------->ARR11(3) ---ANAC46                     --------->ZAT18 <---------ARR11(3)<------MYB83 ---ANAC58                   --------->At4g35610     <---------At4g35610 ---ANAC58                   <---------At4g35610   <-----------GT1                                 <- ->ATHB12            <---------ARR11(3)        --------->ARR11(3)<------MYB46(1)       <----------DOF2 ------->ARR14(2)    --------->ARR11(3)  <---------REM1(1)   --------->ATHB12     <---------AtMYB61-- --------ARR14(2)   --------->GLK1(1)  <---------ANAC46     <---------YAB1<---------LBD16         <--   ggaaatgctgatgttttgtctgaaatcttgtagctcactttaggtgtaagattttagctcttgtgattggtctaattctgggttttggtctttaagagaa  5268700                            --------->ANAC55(2)                              --------->ATHB51         <---------ZAT14    <---------ANAC55(2)                              --------->ATHB12   ----- --------ARR14(2)--------->ANAC58                                     --------->LBD16           <---- ------->ARR14(2)--------->ANAC58                        --------->ANAC46    -------->ATHB1     <---- ----ZmHOX2a(1)  --------->ANAC46<---------REM1(1)   --------->ARR11(3)     <---------YAB1   --------   ggatactctagttcagtttaagccactattaagtaatgtagcaatgtcgatttaagaactcgaaacttgctccagagtattattgcatagaactagaaag  5268800                                                                                  <---------AHL20(1)                                                                                  --------->AHL20(2)                                                                                  <--------ATHB1                                                                                  <---------ICU4                                                                                  --------->YAB1                                                                                  <---------AHL20(2)                                                                                 --------->ICU4                                                                                 <---------YAB1                                                                     <---------DEAR3(2)                                                                     <---------MYB46(3)                                                                    <---------TOE1(2)                           --------->TOE1(3)                        <---------TOE2(2)                       --------->DAG2                               <---------DEAR3(1)            <---------ANAC58                                <---------MYB52(1) --------->YAB1 ---->At4g35610       ---------->DOF2              --------->HSFB2a(2)      --------->YAB1     ------ -----At4g35610   ------>ZmHOX2a(2)      <---------YAB1------------>MYB.PH3(1)<---------YAB1   ------ -----ZAT2  <---------ANAC58     <----------DOF2   <---------HSFB2a(2) <---------MYB52(1)    <------- -->DOF2  <-----------GT1  --------->TOE2(3)------->TEIL  ----------->GT1  <---------YAB1--------->TOE2(3)   ctgtgttttttttttcttgatccaaaaagccttaactttggttatgaaacttactggaaactgttactcgtcggtttgtgataataatttttcttaatgt  5268900  Previous    Next  AGI:  At5g16120.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G77420.1); similar to Os10g0135600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064121.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB46702.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 5265942    to: 5267982    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g16130.1    Description:  40S ribosomal protein S7 (RPS7C). Identical to 40S ribosomal protein S7-3 (RPS7C) [Arabidopsis Thaliana] (GB:Q8LD03;GB:Q9LF15); similar to 40S ribosomal protein S7 (RPS7B) [Arabidopsis thaliana] (TAIR:AT3G02560.2); similar to 40S ribosomal protein S7 (RPS7B) [Arabidopsis thaliana] (TAIR:AT3G02560.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96919.1); contains InterPro domain Ribosomal protein S7e; (InterPro:IPR000554) Range:  from: 5268424    to: 5270159    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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