Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ------>ZmHOX2a(2)                                     --------->ARR14(2)                                     --------->AGP1                                     <---------ARR14(3)                                     --------->ARR14(3)                                     <---------AGP1                                     --------->ARR11(3)                                     <---------ARR14(2) ---->ZmHOX2a(2)                     <---------ARR11(3) ----ZmHOX2a(2)                 ==============HOX2a_HOX2a                         --------->YAB1 ----->ARR11(3)                 =============HOX2a_HOX2a          <------ZmHOX2a(2) ----->AGP1                     ------>ZmHOX2a(1)                <---------ARR11(3) ------ARR11(3)        <----------DOF2<------ZmHOX2a(2)          --------->ARR11(3)     --------->ANAC46 ------AGP1          ------->TEIL   <---------CCA1(2)   ---------->DOF2----------->RAV1(1)          -   atctatccaaaatcgatagaacgaactttgaatcctacagatcttgaagtgatgaccaaaacgcgaagatcaacaacatatcaacaataaacgcagaaaa  5245700                                             --------------->AtSPL3                                           --------->ARR14(2)                                           <---------ARR14(2)                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                      --------->ARR14(2)          <---------HSFC1(2)                                      --------->ARR11(3)          <---------HSFB2a(1)                                      <---------ARR14(2)          --------->HSFC1(2)     ----------->GT1                  <---------ARR11(3)  --------->CCA1(2)      <----------DOF2   --------->At4g35610          --------->ANAC58 ------->TEIL     --------->HSFB2a(1) --------->DOF2                 --------->ANAC58 --------->SPL7  <---------KAN4(2)             ------   cgagaagcagaaaaaacattgtcgaagtatgagcaaggaagatcggaaccgtaccttgagaaatgggaattttcgaattagggcttttgaattcgaagcg  5245800                                                                                                    =                                                                                                    <                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                            <---------AHL20(2)                          --------->YAB1                                           --------->AHL20(2)                           --------->AHL20(2)                                  --------->O2                                     ------------>CBF -                                  <---------O2                                     <---------MYB59  <                                  --------->TGA1a                               =====================                                  <---------TGA1a<----------ID1                 ------->GAMYB  ------                                  =============================bZIP_DOF        <---------MYB52(2)   -                                  <---------ANAC58                             --------->MYB46(3)   <                                  <---------ANAC58  ---------->DOF2            <---------MYB55(2)   -                       *TSS       <---------ANAC55(2)      ---------->DOF2     --------->DEAR3(1)  --                    <---------LBD16 ----------->HVH21      <---------ZAT14  <---------WRKY12   ------                 >>>>>>>>>CBP60g  --------->ANAC55(2)   ----------->GT1     <---------WRKY38(1)------ ----->GT1       >>>>>>>>>SARD1   =============================bZIP_DOF--------->ALFIN1<---------ATHB12   aaattaggggaagtgagaaatttgggggagacggtctcgtgaccattaaatgggaaaagagtaaagagagagagaggggcaacgacccaattaaaatacg  5245900          <-----------RAV1(1)       --------->GLK1(2) <-------PIF5 ------->PIF5 <-------PIF4 <-------MYC3 <-------MYC4 ------->MYC4 <-------MYC2 ------->MYC2 ------->MYC3 <---------WRKY18(1) ------->PIF4<---------ETT(2) ===============================bZIP_DOF ---------TGA1a -------->O2 --------->ETT(2) ---------ANAC55(2) =========MYC_MYB        <------ZmHOX2a(1) --->ANAC58  --------->WRKY12                               ----------->GT1              --------->MYB59 -------->ANAC55(2)  ---------->DOF2                        <------MYB46(1)              <---------TOE2(3) ---------O2 --------->WRKY38(1)                            <------MYB83           --------->AHL20(2) -------->TGA1a   <-----------HVH21              <---------AHL20(2)              ----------->GT1 ---------->OsbHLH66<---------WRKY12            --------->AHL20(2)   ----------->HVH21  <---------ICU4 --->ANAC46  ----------->HVH21             --------->ATHB51<---------MYB46(3)--------->YAB1         - --->ANAC58--------->At4g35610             <---------ICU4 --------->ALFIN1  <---------ATHB12     ----   acacgtgctaatctgttgaccgtcaaaggacttaattctcgtccataattttaaattgaagtgggtgaaatgtgacgaatcataagttaataaggtcatt  5246000                                                                      <---------At5g28300                                                                     <-----------GT1                                                                   <----------TaMYB80                                                                   --------->GLK1(1)                                                                  <---------ARR14(2)                      <------NtERF2                            <---------ANAC46                     ----------->GT1                         --------->MYB52(1)           <---------AHL20(1)                               ----------->HVH21          --------->YAB1      ------------>CBF         --------->At5g28300<----------DOF2 -------->AHL20(2)  <----------ID1               <---------ANAC58 <-----------ARR10 ----->YAB1--------->AHL20(1)----------->GT1     <---------ANAC58 --------->ARR14(2)------->TEIL <---   catataatacaaaaatattaagggggcaaaatggcaatataagttaagtttccttggggtaaatgacggatttaccctttgccctgaacccatttctagt  5246100                                                          <---------WRKY12                                                 --------->ARR14(2)                            <-----                                                <---------HSFB2a(1)                            <-----                                                --------->HSFC1(2)                             ------                                       --------->DAG2     <<<<<<<<<WRKY18                      ------                                    <------NtERF2<---------ARR14(2)                 ----------->GT1                        ------>ZmHOX2a(2)      <---------TOE1(2) ====================================           <---------YAB1          --------->LBD16 <-------TEIL  <--------P      <---------ZAT2<-----        <----------DOF2*TSS        <------NtERF2<---------HSFC1(2)              --------->ANAC58-----     ---------->ID1  --------->ATHB12 ---------->DOF2   <-----------HVH21       --------->ANAC58<---- <----------DOF2  <------------CBF--------->RAP2.6(2)  <---------ETT(2)  --------->ALFIN1      <----- ------ZAT18   ------>ZmHOX2a(2) <---------LBD16--------->HSFB2a(1)    <---------ANAC46        ------   cccctttgcccttttgatcgaattgatcggagaaggccggaaaagctcgaaggtccgtcgtcaatgggtagctatgtggagcaagctcgtgaaaatcacg  5246200  >>>>>>>>>TBF1 ----ANAC55(2) ----ANAC46 --->ANAC55(2) --->O2                                       <---------At4g35610 ====MYC_MYB                     <---------ANAC46 ----O2                          <---------bZIP60(2)                            ----------->GT1 -->MYC3                         <---------ANAC58                         --------->LBD16 ---MYC3                         <---------ANAC58                   ---------->DOF2 ----TGA1a                       --------->bZIP60(1)             --------->TOE1(3)     <---------YAB1 --->TGA1a       ----------->GT1 <---------bZIP60(1)             --------->TOE2(3)     <---------AHL20(2)   tgaagaagaaggtcgaagaaggtaatttgacaatgtcgtgacttcttcatctcgctatgttttaaaaccctaaacccccaaatggtttttttattgcctc  5246300                                                                 --------------->AGL15                                                        --------->GLK1(2)                                                       --------->ARR14(2)                                                     ----------->ARR10            --------->YAB1                        --------->ANAC46                   <---------YAB1          -------->P                        --------->YAB1       <---------------AGL15--------->YAB1       <------ZmHOX2a(2)                   <---------YAB1  <----------DOF2     <---------TOE2(3)      <---------ARR11(3)               <---------ANAC58<---------GLK1(2)<---------TOE2(3)      --------->ARR11(3)               <---------ANAC58<---------ARR14(2) <------ZmHOX2a(1)   gaaaatgagatcaaccatatcgatactatttaagcctggtttcttatcatagacgcagattcttttgctagattgaggattagggttctcataaaccctt  5246400                                    <---------YAB1                                 <---------ARR11(3)                               --------->ANAC58                            <---------STY1(2)                            --------->STY1(2)           <---------ANAC58                         ------>ZmHOX2a(2)              <---------ANAC58                       --------->AGP1       --------->ALFIN1                       --------->ARR11(3) <---------ANAC58                   --------->At4g35610    <---------ANAC46                   <---------At4g35610    <---------ANAC58            <---------At4g35610   <-----------GT1------->TEIL --------->ANAC58         <---------ANAC46      <---------GLK1(2)   ggtagtaactccatattttgcatctgatctagcaagctctcattgagtgtgtcaaattgcttctatgaattgagcttatagattgtgttgaagttgaaat  5246500                                         ------->TEIL                                      <---------ANAC55(2)      <---------ANAC46                                      <---------ANAC46         <---------ANAC58                               <---------WOX13(1)              <---------ANAC58                             --------->ATHB12      <---------YAB1        <---------REM1(1)                        <---------MYB46(3)     <----------DOF2------>NtERF2  <---------AtMYB61    <--------P     <---------YAB1       <---------At4g35610  ---------->DOF2   ggtgatggtttttttttgttaaatggttgtttgattgattatgtatatactttgttattagcgctgcgtagcaagatgaaggcaaaggcattaatggaat  5246600  Previous    Next  AGI:  At5g16050.1    Description:  GRF5 (GENERAL REGULATORY FACTOR 5); protein phosphorylated amino acid binding. Identical to 14-3-3-like protein GF14 upsilon (GRF5) [Arabidopsis Thaliana] (GB:P42645); similar to GRF7 (GENERAL REGULATORY FACTOR 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96912.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) Range:  from: 5243748    to: 5245823    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16060.1    Description:  similar to hypothetical protein [Cleome spinosa] (GB:ABD96913.1); contains domain PD069074 (PD069074) Range:  from: 5246123    to: 5247434    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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