Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------ZAT2                                     -------                                           --------->ZAT2                              --------->ANAC58                                           <---------At4g35610                         --------->ANAC58                                      ------->GAMYB                               --------->LBD16                                --------->ANAC46                                  --------->HSFB2a(2)                                --------->TOE2(1)   --------->At4g35610           <---------LBD16                                --------->TOE1(1)   <---------At4g35610           --------->ANAC46                           <---------ARR14(2)   <---------ANAC58        <---------GLK1(2)   ---------                           --------->ARR14(2)  <---------ZAT2       --------->ZAT18 ----------->HVH21      <----------DOF2  <---------ATHB12    --------->At4g35610      <-------TEIL <---------LBD16    - --------DOF2    ------->TEIL  ------>ZmHOX2a(1)<---------ANAC58    <---------ZAT18--------->LBD16  <   ctttgcaactttctccatgaactcaaccatttcctcgtaacgctcagcttgctcggctaacttggccaagtacacattctcttcccgggacgaatcagaa  5245400                                                    <---------At4g35610                                                    --------->At4g35610                                                   ----------->RAV1(1)                                                --------->ANAC58                                                --------->ANAC46        --------->ANAC58                                                --------->ANAC58        --------->ANAC46                                               --------->WOX13(1)       --------->ANAC58   <----------DOF2                          --------->ARR11(3)       --------->ZAT18 -->At4g35610                          --------->AHL20(2)       ---------->DOF2                     - >YAB1         <----------DOF2       --------->ANAC58 --------->RAP2.6(2)                         --- -------->ARR11(3)                   ----------->GT1--------->ZAT2---------->DOF2               ----- ---------ARR11(3)                   --------->ANAC58 ----------->RAV1(1)               ---------->DOF2   gacatctttgcaatactcttttaaaaacctgttttcaacaagaaaatatcaagcagcagcaataaacaaagagcacgaaatagaactcagtaatgctgca  5245500                                                          ---------->DOF2                                                        --------->MYB46(3)                                                       --------->ANAC58                                                       --------->ANAC58                                                      ------->TEIL                                 --                             --------->YAB1          <---------ALFIN1                             <--                             <---------ICU4         --------->MYB46(3)                           <---                            <---------ATHB12       --------->ANAC46                              ----                          --------->WOX13(1)       --------->ANAC58                              ---- -------->GLK1(2)      --------->YAB1              --------->ANAC58                     --------->ZAT6 ------>MYB46(3)    --------->TOE2(3)       <---------AHL20(2)                 --------->MYB52(1)<--- ------>RAV1(1)     --------->YAB1         --------->AHL20(2)    --------->AHL20(2)   <-----------GT1   acaatcttgcattcaagagcaacgataacaatcatctctaacaaaattaatccacgcacccaaagaataaaaaactttgacaaacgatttacactgctag  5245600                                       ------>ZmHOX2a(2)                                     <---------AGP1                                     <---------ARR14(3)                                     --------->ARR14(3)                                     <---------ARR14(2)                                     --------->ARR11(3)                                     --------->ARR14(2)                                     --------->AGP1 ---->ZmHOX2a(2)                     <---------ARR11(3) ----ZmHOX2a(2)                 =============HOX2a_HOX2a                          --------->YAB1 ------AGP1                     ==============HOX2a_HOX2a         <------ZmHOX2a(2) ----->ARR11(3)                 ------>ZmHOX2a(1)                --------->ARR11(3) ----->AGP1            <----------DOF2<------ZmHOX2a(2)          <---------ARR11(3)     --------->ANAC46 ------ARR11(3)      ------->TEIL   <---------CCA1(2)   ---------->DOF2----------->RAV1(1)          -   atctatccaaaatcgatagaacgaactttgaatcctacagatcttgaagtgatgaccaaaacgcgaagatcaacaacatatcaacaataaacgcagaaaa  5245700                                             --------------->AtSPL3                                           <---------ARR14(2)                                           --------->ARR14(2)                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                      --------->ARR11(3)          --------->HSFC1(2)                                      <---------ARR11(3)          <---------HSFC1(2)                                      <---------ARR14(2)          --------->HSFB2a(1)     ----------->GT1                  --------->ARR14(2)  --------->CCA1(2)      <----------DOF2   --------->At4g35610          --------->ANAC58 --------->SPL7   <---------HSFB2a(1) --------->DOF2                 --------->ANAC58 ------->TEIL    <---------KAN4(2)             ------   cgagaagcagaaaaaacattgtcgaagtatgagcaaggaagatcggaaccgtaccttgagaaatgggaattttcgaattagggcttttgaattcgaagcg  5245800                                                                                                    -                                                                                                    =                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                            <---------AHL20(2)                          --------->YAB1                                           --------->AHL20(2)                           --------->AHL20(2)                                  <---------ANAC55(2)                              ------------>CBF <                                  --------->ANAC55(2)                              <---------MYB59  <                                  =============================bZIP_DOF         ------->GAMYB  ------                                  <---------TGA1a                               =====================                                  <---------ANAC58                             --------->DEAR3(1)   -                                  --------->TGA1a          <---------ZAT14     <---------MYB55(2)   -                                  =============================bZIP_DOF        <---------MYB52(2)   <                       *TSS       <---------ANAC58         ---------->DOF2     --------->MYB46(3)  --                    <---------LBD16 ----------->HVH21   ----------->GT1     <---------WRKY12   ------                 >>>>>>>>>SARD1   --------->O2      ---------->DOF2         <---------WRKY38(1)------ ----->GT1       >>>>>>>>>CBP60g  <---------O2   <----------ID1        --------->ALFIN1<---------ATHB12   aaattaggggaagtgagaaatttgggggagacggtctcgtgaccattaaatgggaaaagagtaaagagagagagaggggcaacgacccaattaaaatacg  5245900          <-----------RAV1(1)       --------->GLK1(2) <-------MYC3 <-------MYC4 ------->MYC3 ------->MYC2 ------->PIF5 <-------MYC2 ------->MYC4 <-------PIF5 <-------PIF4 <---------WRKY18(1) ------->PIF4--------->WRKY38(1) -------->TGA1a ===============================bZIP_DOF ---------TGA1a ---------O2 --------->WRKY12 --->ANAC58  --------->ETT(2) =========MYC_MYB <-----------HVH21                         ----------->GT1              <---------TOE2(3) -------->ANAC55(2)      <------ZmHOX2a(1)                  <------MYB46(1)              --------->MYB59 -------->O2 <---------ETT(2)                               <------MYB83           --------->AHL20(2) ---------ANAC55(2)  ---------->DOF2             <---------AHL20(2)              ----------->GT1 ---------->OsbHLH66<---------WRKY12            --------->AHL20(2)   ----------->HVH21  <---------ICU4 --->ANAC58  ----------->HVH21             --------->ATHB51<---------MYB46(3)--------->YAB1         - --->ANAC46--------->At4g35610             <---------ICU4 --------->ALFIN1  <---------ATHB12     ----   acacgtgctaatctgttgaccgtcaaaggacttaattctcgtccataattttaaattgaagtgggtgaaatgtgacgaatcataagttaataaggtcatt  5246000                                                                      <---------At5g28300                                                                     <-----------GT1                                                                   <----------TaMYB80                                                                   --------->GLK1(1)                                                                  --------->ARR14(2)                      <------NtERF2                            <---------ANAC46                     ----------->GT1                         --------->MYB52(1)           --------->AHL20(1)                               ----------->HVH21          --------->YAB1      ------------>CBF         --------->At5g28300<----------DOF2 -------->AHL20(2)  <----------ID1               <---------ANAC58 <-----------ARR10 ----->YAB1<---------AHL20(1)----------->GT1     <---------ANAC58 <---------ARR14(2)------->TEIL <---   catataatacaaaaatattaagggggcaaaatggcaatataagttaagtttccttggggtaaatgacggatttaccctttgccctgaacccatttctagt  5246100                                                          <<<<<<<<<WRKY18                                                 --------->ARR14(2)                            ------                                                <---------HSFB2a(1)                            <-----                                                --------->HSFB2a(1)                            <-----                                       --------->DAG2     <---------WRKY12                     <-----                                    <------NtERF2<---------ARR14(2)                 ----------->GT1                        ------>ZmHOX2a(2)      <---------TOE1(2) ====================================           <---------YAB1          <------NtERF2--------->HSFC1(2)               <---------ZAT2------        <----------DOF2*TSS        --------->LBD16 <-------TEIL  <--------P     --------->ANAC58<----     ---------->ID1  --------->ATHB12 ---------->DOF2   <-----------HVH21       --------->ANAC58----- <----------DOF2  <------------CBF--------->RAP2.6(2)  <---------ETT(2)  --------->ALFIN1      <----- ------ZAT18   ------>ZmHOX2a(2) <---------LBD16<---------HSFC1(2)     <---------ANAC46        ------   cccctttgcccttttgatcgaattgatcggagaaggccggaaaagctcgaaggtccgtcgtcaatgggtagctatgtggagcaagctcgtgaaaatcacg  5246200  >>>>>>>>>TBF1 --->O2 ----O2 ----TGA1a ----ANAC55(2)                                <---------At4g35610 ====MYC_MYB                     <---------ANAC46 --->TGA1a                       --------->bZIP60(1)                            ----------->GT1 ---MYC3                         <---------ANAC58                         --------->LBD16 -->MYC3                         <---------bZIP60(1)                ---------->DOF2 ----ANAC46                      <---------bZIP60(2)             --------->TOE2(3)     <---------AHL20(2) --->ANAC55(2)   ----------->GT1 <---------ANAC58                --------->TOE1(3)     <---------YAB1   tgaagaagaaggtcgaagaaggtaatttgacaatgtcgtgacttcttcatctcgctatgttttaaaaccctaaacccccaaatggtttttttattgcctc  5246300  Previous    Next  AGI:  At5g16050.1    Description:  GRF5 (GENERAL REGULATORY FACTOR 5); protein phosphorylated amino acid binding. Identical to 14-3-3-like protein GF14 upsilon (GRF5) [Arabidopsis Thaliana] (GB:P42645); similar to GRF7 (GENERAL REGULATORY FACTOR 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96912.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) Range:  from: 5243748    to: 5245823    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g16060.1    Description:  similar to hypothetical protein [Cleome spinosa] (GB:ABD96913.1); contains domain PD069074 (PD069074) Range:  from: 5246123    to: 5247434    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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