Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <------ZmHOX2a(1)                                                                    <---------TOE2(3)                                                              --------->AHL20(2)                           <<<<<<<<<TAC1                      <---------AHL20(1)                         <---------ALFIN1                     --------->AHL20(1)              <---------At4g35610                             <---------AHL20(2)       <----------DOF2   --------->ZAT6               ----------->GT1     ----------->GT1 --------->MYB46(3)--------->GLK1(1)  --------->GLK1(2)      --------->AHL20(2)  ----------->GT1   ttaacaactctttttcatcagatttcaacactcgaaaaacaatctatgtaagtgtaatgtgaaataaattaagaaataggaaaatgtaacaaaaacactg  5223700                                                    --------->ANAC58                                                    --------->ANAC58                                                 <------NtERF2                                                 <---------At4g35610                                                 --------->ZAT2                                                 --------->At4g35610               <-----------GT1                                              --------->ATERF1(1)                <----------DOF2                      --------->TOE2(3)       <------NtERF2                      <---------DAG2         <---------------AGL15               <---------ATERF1(1)              ------>ZmHOX2a(1)         --------------->AGL15              --------->ALFIN1                <---------ANAC58        ----------------->AGL2      ----------->HVH21   ---------->DOF2     <---------ANAC58        <-----------------AGL3    <---------ICU4 <---------ZAT2           <-----------GT1   tatattctaaactaaaattagaaaccatagacaaaaacatgacagggtggcagctagcaaaagaacagtaatctaatttcctgctttacccttcaaaatt  5223800                                                                                     <----------DOF2                                                                                  --------->ARR11(3)                                                                                  <---------AHL20(1)                                                                                  <---------ARR11(3)                                                                                 --------->RVE1(1)                                                                                 --------->CCA1(1)                                                                               --------->YAB1                                                                              <---------YAB1                                                                            --------->YAB1                                                                           <---------YAB1                       <---------ANAC58                                   --------->AHL20(2)                       <---------ANAC58                                   <---------AHL20(2)                  --------->ARR14(2)                                    <---------YAB1                  --------->ARR11(1)              --------->ANAC58    <---------AHL20(2)                  <---------GLK1(2)<---------YAB1 --------->ANAC58    --------->AHL20(2)        --------->ANAC46<----------DOF2           --------->ANAC46   <---------AHL20(2)             -   tttgaaatacacaaaatatagatttgctttactgactattcttgtcgattacaagaaacaatatgggcaaaattatttttataatatcttttcttacaaa  5223900                       <-----------GT1                  <---------DAG2               <-----------GT1           --------->AHL20(2)           --------->AHL20(1)          --------->ANAC46           <---------AHL20(2)          --------->ANAC58     --------->ANAC58                 --------           <---------AHL20(1)        <---------ALFIN1     --------->YAB1                     --------        <---------AHL20(2) ------->GAMYB      <---------DAG2--------->ANAC58     --------->ZAT6    <-      --------->AHL20(2)<-----------GT1--------->ANAC58 --------->ANAC58     <----------DOF2 ------->TEIL      <---------AHL20(2)--------->MYB52(1)    <----------DOF2       <---------YAB1           <------- -------->AHL20(2)<----------DOF2  <---------ALFIN1     --------->ANAC58  <-----------GT1 <---------ATHB12   tttttaatataaatttattacttttttaacggtctccccacacacaaactttatcgacaagcatgctattctaatttcactttagactaccaatgaatct  5224000                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                <---------O2                                                                                =====================                                                                       <----------DOF2 <-------TEIL        ---------->DOF2                                                ===================bZIP_DOF   <---------------AGL15                                            <---------YAB1--------->ALFIN1   --------------->AGL15          --------->AtLEC2            <---------TOE1(3) <---------bZIP60(2) ->GLK1(2)         <---------ARR14(2)                         <---------TOE2(3) <---------ANAC46 ->ARR14(2)        <---------ARR11(3)                       ---------->DOF2     <---------TGA1a --------CCA1(2)   --------->ARR11(3)                  --------->AHL20(2)     <---------ZAT14 --ARR14(2)       <---------CCA1(2)     --------->AHL20(2)  ==============================bZIP_DOF   ggtatctctataaagtttgtatatcttgtttctgacatacaaaaaaatagttttttttaaaataaaggttatgcttttggtgaagtgggttcatcttgat  5224100                     --------->TOE2(3)               <----------DOF2                *TSS  <------MYB83               --------->TOE2(3)----------->GT1  --------->CCA1(2)        <-----------TBP  <------------CBF<------ZmHOX2a(1) <---------YAB1 =========================bZIP_DOF   ---------->DOF2<------MYB46(1)                    <----------DOF2   gttgaaatgtttttatactttaaccaaaattgaaatgaaaaaaggatagagatttggttttttgattcttccaatctcactctctctgtctttctctctc  5224200                                                                                            ---------                                                                                           <---------YAB1                     <---------ZAT2                                                      --------->YAB1                     --------->At4g35610                                                --------->ICU4                     --------->ZAT2                                                   --------->YAB1                --------->HSFB2a(2)                                                --------->YAB1                <---------HSFB2a(2)                        <<<<<<<<<<<<<<<<<LFY   <---------YAB1               <---------LBD16                --------->KAN4(2)                   --------->ICU4         ------>MYB46(1)      --------->ARR11(3)   ------>ZmHOX2a(1)     <---------YAB1 <---------YAB1         ------>MYB83<---------At4g35610  --------->At4g35610         <---------ZAT14<---------YAB1       <---------MYB59      <-------TEIL  <---------At4g35610         --------->ZAT18--------->ICU4   catcaaataccaaattatctggaagctgagtacatcttgttttctgctcattcctctgtttcaacaatggagagtactattgttatgatgatgatgataa  5224300              <----------DOF2             <---------ANAC58             <---------ANAC58    <----------DOF2   ------>ZmHOX2a(2)                                        <----------DOF2  <------ZmHOX2a(2)                                        <---------ANAC58 --------->AGP1                                     --------->ANAC58 <---------AGP1                                     --------->ANAC46                                - <---------ARR11(3)                                 --------->ANAC58                                - --------->ARR11(3)                                 --------->ANAC55(2)                       <------ --------->ARR14(3)                                <---------LBD16                        <----------TaMYB80 <-----------ARR10                               <---------REM1(2)  ---------->DOF2      <---------KAN4(2) <---------ARR14(3)                              <---------ZAT14   ------>ZmHOX2a(1)  ----------->GT1 --------->ARR14(2)                              --------->ZAT14<---------------AGL15<---------TOE1(3) <---------ARR14(2)                      <----------DOF2<---------WOX13(1)           <---------TOE2(3) >YAB1  <----------DOF2                <---------At4g35610 <---------ANAC58     <----------DOF2<-----   caagatctttcttttgcttcttgggatttttatgccttctctgctcttctgttcacggattgctttctcctaaaggtgttaactttgaaggtatattcac  5224400                                                                                     --------->HSFB2a(2)                                                      <---------ANAC46               --------->HSFC1(1)                            <------------------------ANAC81                          <---------HSFB2a(2) --------->DOF2  <---------GLK1(2)                    <---------ANAC58              <---------LBD16 -------->ZAT14  --------->ARR14(2)                   <---------ANAC58       <------MYB83 --------->ICU4 -----GT1 <---------DAG2   <----------DOF2         <----------DOF2           <------MYB46(1) ----At5g28300   <---------ARR14(2)     <-----------GT1          --------->ALFIN1<----------DOF2   tgtaaagtctcactctttggattctctctcttttttttttttttacattgtcactttcgtagatgaagtgtttgatatttggtctttctggaatttttag  5224500                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                        <---------ZAT18                      <---------AHL20(1)                                --------->ZAT14                      --------->ARR11(3)                          <-----------TGA1                      <---------ARR11(3)                          <-----------HVH21        ----------               ---------->DOF2       ------>ZmHOX2a(2)     <---------AHL20(2)      <---------WOX13(1)      --------->GLK1(1)<---------AHL20(2)                 <---------AHL20(2)  <----------DOF2    <---   ttgatgggaattcaaataaaagtatatatttcttcttgatccaaactaatatgggagttttttattttcgtcagtgcaagctttgatggacataaaagct  5224600  Previous    Next  AGI:  At5g16000.1    Description:  NIK1 (NSP-INTERACTING KINASE 1); kinase. similar to NIK2 (NSP-INTERACTING KINASE 2), protein kinase [Arabidopsis thaliana] (TAIR:AT3G25560.2); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G23950.1); similar to NIK2 (NSP-INTERACTING KINASE 2), protein kinase [Arabidopsis thaliana] (TAIR:AT3G25560.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96908.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49249.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96874.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains Inter Range:  from: 5224146    to: 5227291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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