Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ------->TEIL                 <---------ZAT18                                                                    <             <---------YAB1                                                                       >>>           <---------ICU4                                                 --------->TOE2(2)       >>>           --------->YAB1                                                 --------->TOE1(2)       >>>          --------->ICU4                                      ----------->GT1                     <--     ----------->GT1 <----------DOF2                         ----------->GT1                      >>> ------GT1<---------YAB1                              ------->TEIL       --------->YAB1       <------ -YAB1 <---------ARR11(3)                    <---------ANAC46<---------ZAT6                   -------   cagtatcaagttattattatgcactttccaactgttacgaacaagtttagtatatgaatttgagagttaaaacaaacatatgagcttcttcacccatgtg  5192700 -------TEIL >>>>>>GATA-2 >>>>>>GATA-4 >>>>>>GATA-1                        --------->ANAC58 -------ARR14(2)                --------->DAG2                 --------->TOE1(3) >>>>>>GATA-3            <-----------GT1                       --------->TOE2(3) -MYC3             <---------YAB1    --------->ANAC58          --------->YAB1                <------- >MYC3       ---------->ID1   ---------->DOF2               <---------CCA1(2)                --------   gattcattttggtttgtcgttataatttaaccaaaaggtaagcaaacattttctgttttatcttatcttaaacaaaaatttctgaatcgagtcagtatac  5192800                                                                                                   <-                                                                                                   --                            <----------DOF2            <---------ANAC55(2)                         <-  <---------ZAT18     <---------YAB1       --------->MYB52(1)                                      <-  --------->ZAT18--------->ANAC46 <---------AHL20(2)   ----------->GT1                             -- --ZAT14      --------->ZAT14    --------->AHL20(2)   <---------ICU4                        <-------- ->ZAT14      --------->ARR14(2)<---------YAB1       --------->ICU4               --------->ANAC46 --   caattgcactaacaagtatacactatgattctttattatatgtcaaaacggtctaataagtaaaattgaatgtgagtaacatctaagaaacactgaatcg  5192900                                                                              ------->MYC3                                                                              <-------MYC3                                                                              <-------MYC4                                                                              <-------PIF5                                                                              <-------MYC2                                                                              ------->MYC2                                                                              ------->PIF5                                                                              ------->MYC4                                                                             <---------ANAC55(2)                                                                             <---------TGA1a                                                                             <---------O2            ---------->ID1                                                   <---------ANAC46           <-------GAMYB                                                     --------->TGA1a          <---------MYB46(3)                                                 --------->O2        <---------ANAC46                                                --------->bZIP60(1) --------ZAT14                       <---------YAB1                     <---------bZIP60(1) ------->At4g35610           <---------ANAC58                         --------->YAB1 --------At4g35610           <---------ANAC58                         <---------ICU4 --------ZAT2            <---------ANAC58                            <---------YAB1 ------->ZAT14           <---------ANAC46                            --------->ICU4       <---------ANAC46 -GLK1(2) --------->MYB52(2) <---------ANAC46                      --------->YAB1 <---------ARR14(2) ------->ZAT2            <---------ANAC58                     <---------AHL20(2)  --------->ARR14(2)   ctgcagcgttgtttgttgttctcagtttcttgagtgtttcttattctattcaatgttttagttttttattcatgatgacacgtggatagtctacgtggaa  5193000                                                                ------>ZmHOX2a(2)                                                               <------ZmHOX2a(2)                                                              --------->ARR14(3)                                                              <---------ARR14(2)                                                              <-----------ARR10                                                              <---------ARR14(3)                                                              --------->ARR11(3)                                                              --------->ARR14(2)  <---------ICU4                                                              <---------ARR11(3)  --------->ATHB12                   <---------ALFIN1    <---------ARR11(3) --------->LBD16 --------->ANAC58       ----------->RAV1(1)             --------->ARR11(3)--------->LBD16  --------->ANAC46    --------->ANAC58             <---------YAB1         <---------HSFB2a(2)      <---------YAB1    --------->ANAC46         <------------CBF           --------->HSFB2a(2)      --------->ICU4    --------->ANAC58       <---------YAB1   <----------DOF2   <---------AGP1   --------->YAB1       <  <<<<<<<ZML2     <---------REM1(2)---------->DOF2     <---------LBD16    --------->ANAC58---------->DOF2   gctagaacgccacaatcgtctccacagttgtgattgtgaaaggtctctttttttttttcccgaagatctcgacttcacgactcatgattccacaaagttt  5193100                                                                   --------->DAG2                                                                  ---------->DOF2                                                            --------->LBD16                                                           --------->LBD16              *TSS                                        <---------HSFB2a(2)        <---------ZAT14                                   <---------LBD16                        <---        <---------At4g35610                               <---------ANAC46                       <---        --------->ZAT14      <---------ANAC58             <---------ANAC58                   <-------   --------->GLK1(1)         <---------ANAC58             --------->HSFB2a(2)              <---------At4g35610   <---------GLK1(1)   <---------YAB1                     <---------ANAC58                 --------->At4g35610 ---------TOE2(3)    --------->YAB1                      <---------LBD16           <---------At4g35610   ttaagaattctgcagtttcagatttataatcgcttgcctaagtttcaattcatcttcattccgggagaaaaagtcgcgatacttgagctactcagcttta  5193200                                           --------->ARR14(2)                                           <---------ARR14(2)                                           --------->KAN4(2)                                          <---------KAN4(1)                                          --------->KAN4(1)                                          <----------TaMYB80                 <-----------------AGL1  ---------->TaMYB80           --------->ARR11(3)            <---------TOE2(3)            <---------KAN4(2)      <---------ANAC58   <-----------GT1                    --------->ANAC58          <---------ANAC58 ------TOE2(3)<---------ARR11(3)      --------->ANAC58          <---------ANAC46      <----------DOF2 ------TOE1(3)--------->ARR11(3) <------ZmHOX2a(2)    <-----------HVH21   <<<<<<<<<TBF1 ---DOF2    <---------TOE1(3)   <-----------HVH21     <-----------TGA1<---------ARR11(3)   gggtttaacatgttaaggtctctgatttggaaacgatcacaggcatattcttcagtcgtcacgatgtcgtgagttcttcttctaaggcctttcgaattct  5193300                                     ------>NtERF2                              <---------ICU4                              --------->ATHB12                                                    <--                             <---------YAB1                                                     -----                            <----------DOF2                                                     -----                           ------>ZmHOX2a(2)                         <---------YAB1             -----                         <---------ARR11(3)                         <-----------GT1           <------                         --------->ARR11(3)         ------->TEIL  --------->GLK1(1)           -------                ---------->DOF2   <---------At4g35610            --------->ARR14(2)       -----------   atagaactgtttttcgaataaagcattgatctttattgctgccagagacgaatgaatcacttgtagggattttcattttggggacatagtctctgaccca  5193400                                                             <---------YAB1 -------ALFIN1                                <-----------RAV1(1) ------>RAV1(1)                      -------->ATHB1          --------->ICU4 ->MYB83                        --------->AHL20(2)         --------->YAB1                         <-- ->MYB46(1)       <---------ANAC58   --------->ATHB12 <---------ARR14(2)                        ----- ---MYB59         <---------ANAC46   <---------ICU4   --------->ARR14(2)             <----------DOF2- -->MYB46(3)      <---------ANAC58  <---------YAB1 <---------ANAC46          <----------DOF2<-------- >HVH21 <-----------GT1--------->GLK1(1) --------->YAB1   --------->ICU4   ---------->ID1   ---------   acacttgatattactgaattgtgtgatttcttcataaaatcattgacaatgttgcatatactgatgatggtcttcttgtctttatctctttggcagttca  5193500          <------ZmHOX2a(1) <-----------HVH21 -------ATHB12                                                ----------->GT1 ---->WOX13(1)                                               <---------TOE1(3) -------->WOX13(1)                                           <---------TOE2(3)           <----------DOF2 -At4g35610           <----------DOF2  <---------MYB46(3)    --------->MYB59            <---------ANAC58 >At4g35610     ---------->DOF2       <---------TOE1(2)      --------->DAG2             <---------ANAC58   atcagtcagagaggaaatgaaaggcttttgtctgaagtcgctggttcacattcaagagataataaggtaatagacaataactctctcattgcttttgagt  5193600  Previous    Next  AGI:  At5g15910.1    Description:  dehydrogenase-related. similar to binding / catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT5G10730.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96868.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 5193114    to: 5195399    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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