Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------LBD16                                                                                          -------->P                                                                                         --------->MYB52(1)                                                                                         ------>MYB83                                                     --------->ANAC58                   ----------->HVH21                                                     ------->GAMYB                     <---------MYB59                                                  ------->GAMYB                        --------->AtMYB61                                                 <---------MYB55(2)                   ---------------                                                 <---------MYB52(2)                  <---------------                                                 --------->MYB46(3)              --------->ANAC58        <---------At4g35610                     ------>MYB83                     --------->ANAC58 ------->DOF2          <-------MYC3             ------>MYB46(1)              ------>ZmHOX2a(2) ->TOE2(2)             <-------MYC2            ----------->RAV1(1)          <------ZmHOX2a(2) ->TOE1(2)<------ZmHOX2a(2)     --------->At4g35610  --------->ANAC58      --------->ARR11(3)  <----- -ANAC55(2)            ------->MYC3          --------->MYB46(3) <-----------GT1  --------->ANAC46 -->RAV1(2)            ------->MYC2--------->MYB52(1)--------->ANAC46      <---------ARR11(3)-------- -GT1   --------->At4g35610     <---------At4g35610--------->MYB52(1)   <---------TOE1(2)------>MYB46(1)   gaaagaaggcagatcaaagactgcatgtggtttctgctaactgagtcaccaacaaacgccatggttttacctctcacgatctcaagaaacctaaccgggt  5191700                                                            <---------ANAC46                                                            <---------ANAC58                                                            <---------ANAC58                                                            --------->ETT(1)                                                          --------->REM1(2)             <---------RAP2.6(3)                          <-----------HVH21       ---------->DOF2                                   ----------->HVH21     --------->LBD16                                    --------->LBD16     --------->ANAC46                                  <---------ANAC55(1)    --------->ATERF1(2)                                <---------ANAC55(2)    <---------ATERF1(2) --------->ANAC58               --------->ANAC55(2)                   <-------   --------->RAP2.6(3)  --------->ANAC55(1)            <---------ANAC58                      <-------   <---------LBD16      --------->ANAC58               <---------ANAC58       --------->ANAC46  --------->MYB52(1)    --------->ANAC46           --------->GLK1(1)          --------->AtLEC2 -->AGL1 --------->ANAC58  --------->SPL7--------------->AGL15                --------->ANAC58    --- --------TaNAC69(2) <---------ALFIN1     <---------------AGL15 <---------ARR14(2)            <------- ------HVH21--------->RAP2.6(2)         ----------------->AGL1 --------->ARR14(2)  --------->ICU4 <-- ->LBD16 --------->ANAC58 <---------MYB52(1)       <---------GLK1(1)          --------->ANAC58   <---   caaataccggcaagccgtcttcgcacccgtaaggtttccatttccatttgatgaaatccgtgtcgggtcttccaaacttcatgcaattttggtgttcgtg  5191800                     --------->ZAT14                  <------MYB83                  <------MYB46(1)            <---------ANAC46                                                   <---------ANAC55(2)          <-------PIF5                                                  <---------At4g35610          ------->PIF5                                                  <---------ZAT2         --------->ANAC58                                               --------->At4g35610       <---------ALFIN1                            <---------ALFIN1   <-----------RAV1(2)      --------->ZAT2 <---------ZAT14              ------>MYB46(1) <-----------HVH21              <---      <---------ZAT2<---------REM1(1)             ------>MYB83<---------ARR14(2)    ----------->GT1 --ANAC46--------->ANAC58                     --------->PCF2  --------->GLK1(2)--------->ANAC55(2) --ANAC58--------->bZIP60(2)<---------At4g35610  <---------ALFIN1<-----------RAV1(1)<---------bZIP60(1) ------>ARR14(2) <---------AtMYB61          <------ZmHOX2a(1) --------->ARR14(2)    --------->bZIP60(1) --ANAC58--------->ANAC46   --------->At4g35610--------->DEAR3(2)=================RAV    --------->REM1(1) -------ARR14(2)<--------P --------->DAG2 --------->MYB59 --------->LBD16  <-----------HVH21<-------- ------CCA1(2)<-----------RAV1(1)  <-----------RAV1(2)   --------->LBD16--------->ZAT2 <-----------GT1   tatcgcccagcacgtcgtgttggtgtagtaaggtgcctcagggttaggaacccactctcccgagaatatgtcgcagctgtcatgtgatgttacaacaccg  5191900                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                 --------->MYB111(2)                                 --------->MYB55(2)                                <--------P                               <-------GAMYB                              ------------>MYB.PH3(2)                              <---------MYB46(3)                  ---------->DOF2             -------       <-------TEIL     <---------ANAC46                       --------->ANAC58           <-------GAMYB      <--------P        <---------ANAC58    <------ZmHOX2a(1)  --------->ANAC46          ----------->GT1   <---------TOE2(3)    <---------ANAC58  <---------TOE2(3)    --------->ANAC58          <---------MYB46(3) ------MYB52(1)    <----------DOF2<-------GAMYB                --------->AtLEC2         <---------YAB1 -ALFIN1      <---------At4g35610<---------MYB46(3)     --------->ARR11(3)           --------->ICU4   ttttcgaggttgatgatgctgctttggcttggaggttgttgcttgaggaagaagttagggtcttcaagcaaagggtagagaagagggatgatggttaaaa  5192000                             <----------DOF2           <-----------HVH21<---------ANAC58                  --------->ANAC58 <---------REM1(1)   --------->ICU4   <---------AtLEC2        --------->ANAC58   --------->CCA1(2) --->DOF2 --------->YAB1    <---------ANAC58  <-----------RAV1(1)           ---------->DOF2     -----   gagatgtagcaatggtcactgcgatgagtagcttttgtttacatggaaatgttgcagaatgaacaagctccattgaaggaaagatagagagagacagaga  5192100         --------->GLK1(2)        <---------GLK1(2)                                                                --------->YAB1        --------->ARR11(3)                                                               <---------ICU4        <---------ARR11(3)                                                     --------->ATHB51       <---------RVE1(1)                                                       <---------AHL20(2)      ----------->ARR10                        <------------CBF                --------->AHL20(2)   <------ZmHOX2a(1)           --------->ICU4 --------->ATHB12                 <---------ICU4      -- ----->DOF2         ---------->DOF2  <-----------GT1                    ----------->GT1 <---------ATHB12   aagaaggagagattttgagagagaaagcatacaaagattataccagagtaattgggactcgatttgtttataagttgtgaattatttcaaatcatgaaat  5192200                                                                <---------ICU4                                                                --------->ATHB12                                                               <---------YAB1                                                             <---------ICU4                                                             --------->YAB1                                      <-----------HVH21     --------->ICU4                                   <------MYB83             <---------YAB1                                   <------MYB46(1) <---------ICU4              --------->MYB52(1)                                  --------->MYB111(1)<---------YAB1          <---------MYB59                                 <--------P        --------->YAB1<------------CBF                  -- --------->GT1             ---------->DOF2        --------->ICU4--------->ATHB51            ---------   tttgtgaatttttcttctatgttagaacaaaaagagtaggtgtcacatctaaattatgagttattattattgcaaaatagctaactgaaaattttaaagt  5192300                  ------------>CBF            --------->AHL20(2)            <---------AHL20(2)            --------->AHL20(1)            <---------AHL20(1)        <---------MYB52(1)    ------------>CBF         --------->AHL20(2)   <---------ATHB12                  <---------At4g35610    <------NtERF2            <---------AHL20(2) --------->WOX13(1)        --------->ICU4                 --------->ETT(1)          --------->AHL20(2) ---------->CBF  <-----------GT1     --------->LBD16     --------->RAP2.6(3)     --------->ICU4    <- ->DOF2------------>CBF    <---------YAB1              <-----------RAV1(1)  --------->ANAC55(2)    --   gatcaatcaaacaataaattcacaatgtgatgactattccgctaatttggacgttttttgtcggcaatttggacgtttaagtgatatttaattctgtaac  5192400                                                    <---------AHL20(2)                                                   <---------AHL20(1)                                                   <---------AHL20(2)                                               <---------AHL20(2)                                               <---------YAB1                                               --------->AHL20(2)         <---------ZAT6<-------GAMYB          --------->AHL20(2)             <---------ANAC46     --------->ICU4   <---------MYB46(3)      --------->AHL20(1)             ----------->GT1  --------->AHL20(2)  --------->MYB111(2)     <---------AHL20(1)    <-------TEIL            --------- ------MYC3        <------MYB46(1)      <-----------GT1            --------->AtLEC2   --------->TOE2(3) ----->MYC3        <------MYB83      --------->YAB1--------->AHL20(2)     <-----------RAV1(1)    ----   acatgtaattagtgtttagctaggttgttaactatgcaattgtcacaatataatttttttttttaaaacatgcattgtgttgtataaatctaaatgataa  5192500                <---------YAB1                   <---------ANAC58              <-----------GT1                    <---------ANAC58          --------->ICU4                   --------->ATHB51       <------NtERF2                       <---------ICU4     --------->LBD16                      --------->ICU4     <---------ANAC46                     <---------YAB1     --------->RAP2.6(2)          <---------ANAC58    <---------LBD16               <---------ANAC46                        <-----------GT1      <----- >YAB1--------->LBD16<-----------GT1    --------->YAB1          <---------YAB1              <-------- ----->ZAT6<---------ICU4         <---------ANAC58           --------->ICU4              <---------YAB1   cacaatgccggaaatattacaattcactaggctatgtcttggtcataatttgcttaactagtacttatgattttttcaacaattcatatttttgattata  5192600  Previous    Next  AGI:  At5g15900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49265.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 5189494    to: 5192073    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version