Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ATHB51                                                              -------->ATHB1                                                              <---------ICU4                                                              -------->HAHB4                                                              --------->ATHB12                                                             <---------ATHB51                                                             --------->ICU4                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                <----------DOF2          ------->TEIL       <----------DOF2                       <---------AHL20(2)       --------->AtLEC2            --- <---------AHL20(2)        ----------->GT1   <-----------GT1 <---------YAB1        --------->ARR14(2) -------->AHL20(2)<---------ATHB12  <----------ID1       --------->AHL20(2)        <---------ARR14(2)   tataaaattctttttgtccaatgaacaataggttaaaacggacaaatttacttttgtgatttaattattgccatgcattttggcatatagtcactctgtt  5148300                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                               <-----                                                                                              -------                                                                                              <------                                          <---------ANAC55(1)                             --------->AHL20(1)                                          --------->ANAC55(2)                             <---------AHL20(1)                                          <---------ANAC55(2)                      --------->ARR11(3)                                          <---------ANAC46                         <---------ARR11(3)              <---------AHL20(2)          <---------ANAC58 --------->ANAC58       --------->GLK1(1)          ----------->GT1           <---------AHL20(2)     --------->ANAC58       <---------GLK1(1)        <---------At4g35610         --------->AHL20(2) <-----------HVH21  <---------ANAC46--------->AHL20(2)        --------->At4g35610  <-----------GT1   <-----------GT1  ----------->GT1  --------->ARR11(3) --------->AHL20(2)    ---------->ID1     <---------ANAC58 --------->AtLEC2      <---------ARR11(3) ------>YAB1  --------->AHL20(2)   --------->YAB1      <-----------TGA1<---------AHL20(2) <---------AHL20(2)   tcataatataagctgtttaatttttgtcatttaacaattttaatacgtgtaacatttcgtcatgcaatgttattttatgtgtagatatctaatttattaa  5148400                                                            <---------AHL20(2)                                                            --------->AHL20(1)                                                            --------->AHL20(2)                                                            <---------AHL20(1)                                                           --------->YAB1                                                          <---------YAB1                      -------                                                         --------->AHL20(2)                --------->YAB1   <----------DOF2                                       <---------AHL20(2)               <---------YAB1 ------->TEIL                            --------->YAB1--------->AHL20(2)        --------->ARR14(2) ------------AtSPL8         --------->YAB1   <---------AHL20(2)                  <---------ARR14(2) ----------->AtSPL8         --------->ANAC55(2)   <---------AHL20(2)          --------->ANAC55(2) ------------AtSPL3         --------->ANAC46--------->AHL20(2)    ----------->GT1--------->GLK1(2) ----AHL20(2)      ---------->DOF2--------->TOE1(2)    <---------AHL20(2)     <---------ANAC55(2) -->AHL20(2)     <---------YAB1   --------->TOE2(2)   --------->YAB1      --------->TOE2(3)--------->TOE2(3) ---AHL20(2)   --------->YAB1   --------->GLK1(2)--------->AHL20(2)      <---------ICU4  <-----------   atgtacttttatttcagttataaaagttatacataatctgcgattataaaattttatattaatataatgcgttaaacattaagtatctgtttacgataat  5148500                                                                                             <-------                                                                              <---------YAB1 <-------                                                                             <---------AHL20(1)              ----------->GT1                     <----------DOF2            <---------AHL20(2)     -     --------->AHL20(2)                        <-----------GT1        <---------TOE2(3)      --------    --------->AHL20(2)                   <----------DOF2       --------->ARR14(2)         --------->AHL20(2) -->YAB1    --------->MYB52(1)          <---------ANAC58       <---------ARR14(2)         <---------AHL20(2) ----------WRI1----------->GT1          <---------ANAC58      <---------CCA1(2)        --------->YAB1   accaaaataaaaaacaagggaaaaattccatcccaaatttttgcttttgttacttttgaatagcaaatctctaatgtattatttttctaaaataaaatct  5148600                                    <---------ANAC55(2)                              --------->AHL20(2)                              <---------AHL20(2)                            <---------YAB1                           --------->TOE2(3)                   <---------AHL20(2)                          --------->ATHB12                    --------->AHL20(2)                   --     ------>ZmHOX2a(1)    <---------ICU4                   --------->AHL20(2)                 -------   --------->YAB1         --------->YAB1                  --------->AHL20(2)                 -------- --ARR11(3)              --------->ICU4                   <---------AHL20(2)                -------->P ----ARR10               <---------ATHB12                <---------AHL20(1)                --------->WOX13(1) ----->ZmHOX2a(1)       <---------ARR11(3)      <---------WOX13(1)           --------->AHL20(2)   --- ->ARR11(3)     --------->At4g35610 --------->ANAC55(2) --------->YAB1  ----------->GT1 --------->GLK1(2)   tcctatcctaatgtcatcatctacaaaatcattaaaatatgtaatgtctgattaactaaaataattttatcaactagtataaaataagagaatcaaccaa  5148700                                                               <-----------HVH21                                                              <----------DOF2                                                            ------>MYB83                                                          --------->MYB46(3)                                                          <---------MYB55(2)                                                         --------->ANAC58                                                         --------->ANAC58          <---------AHL20(2)                    --------->MYB46(3)     <------MYB83                             ----------->RAV1(1)     ----------->GT1                       --------->ANAC58 ------>MYB46(1)     <------MYB46(1)                       --------->ANAC58<---------ALFIN1    --------->MYB59                      --------->SPL7<---------ALFIN1          --------->ANAC46 ------->DAG2                         <---------ANAC58--------->MYB46(3)-------->P              ----- >GAMYB  --------->AHL20(2)           <---------ANAC58--------->DEAR3(1)------>MYB83         ------>ZmHOX2a(1) ->MYB46(3) <------------CBF      <---------MYB52(1)------->GAMYB  --------->ANAC46         <-------- ------->DOF2                 ------>ZmHOX2a(1)*TSS--------->DEAR3(1)   ------>MYB46(1)   ------>ZmHOX2a(1)   aaaagtttggtttaaattgtatagagagagtcctccattagcgtccagcaacaacgcccacccactttcacaccaacttgaacacactactcctcctcct  5148800                                                      --------->AHL20(1)                                                      <---------AHL20(1)                      -------                                                      <---------ARR11(3)          --------->ARR14(2)                                <---------ANAC46      --------->ARR11(3)          <---------ARR14(2)                           ------>NtERF2 ---------->DOF2                          --------->GLK1(2) <---------DAG2           --------->WRKY12       ----------->GT1             --------->LBD16 -------- <----------DOF2          ----------->TGA1--------->DAG2                     ------>ZmHOX2a(1)------- ->ZmHOX2a(1)             ----------->HVH21     ----------->GT1         <----------DOF2     --------- -ALFIN1                <---------At4g35610  --------->ALFIN1------>ZmHOX2a(1)   <---------GLK1(2)   tcactttttccttcaatctctcttctcgctgacgacttggaaataaagtgagggaaaatattcctccaacttcactttcctgagaatctgcaaataaagc  5148900                                       <----------DOF2                           <---------YAB1 -->ANAC58                            --------->MYB52(2)                       --------->YAB1 ->DAG2           <----------DOF2   <---------MYB52(1)                        ======================= -->ANAC58    <----------DOF2     <---------ANAC58                 <-----------HVH21 ->DOF2  <----------DOF2          <---------ANAC58         <----------DOF2    <------ZmHOX2a(2)    <-   aattcaacttccttttctttctttctaaatgaaatttcgttctttgtctcagtctctctctctttcttcggtcgagtccgatcaaaattgaaaacccatt  5149000            --------->DAG2          ---------->DOF2                                             <---------------AtSPL8     --------->ANAC58               --------->HSFB2a(2)               <---------ICU4     --------->ANAC58               <---------------AGL15             --------------->AtSPL8     --------->ANAC46               --------------->AGL15         <---------YAB1              <------    ------>ZmHOX2a(1)              <-----------------AGL2      --------->GLK1(2)             <XXXXXXX ==========HOX2a_HOX2a             <-----------------AGL3     <---------GLK1(2)       --------->ALFIN1 --------GLK1(1)          <---------MYB52(1)                ------>ZmHOX2a(2)     ---------->DOF2   gagttcctcgccaaaaggtatagtcttcgttatttcttctgtaattggataatggggtttgatcgattctgattagtacaatcccaaagtgttgttcttt  5149100                                                           --------->ANAC58                                                           --------->ANAC58                    <---------DAG2             --------->YAB1                             --------->YAB1    ----------->GT1 <----------DOF2            -------->ATHB1                            --------->ICU4   --------->HSFB2a(2)                         <---------ICU4                            <---------YAB1   <---------HSFB2a(2)                        --------->ICU4    --------->ANAC58    <---------ANAC46 ----DOF2   <-----------GT1                   <---------ATHB51  --------->ANAC58  <---------ANAC46 XXXXXXXXXXXXXMIR157A-C                       <---------YAB1  ---------->DOF2  <-----------RAV1(1) --   gttttctggtaaattttctctgctttttttgtgttctgttttaaaacaattattctgagttaagcaaagcaacttgtggttttgttgtgtaatgatatca  5149200  Previous    Next  AGI:  At5g15790.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G02290.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96851.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 5148747    to: 5151436    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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