Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->YAB1                                                              <---------YAB1                                                             <-----------GT1                                                            --------->YAB1                  <---------MYB52(1)                       <---------YAB1                 <-----------HVH21                       <---------AHL20(2)           <---------WRKY38(1)                          <---------AHL20(2)          --------->WRKY18(1)                        -------->ATHB1          <<<<<<<<<<WRKY26                           --------->AHL20(2)          <<<<<<<<<<WRKY38                           <---------AHL20(2)          <<<<<<<<<<WRKY43                           <--------HAHB4               --------------->AtSPL3        <------MYB46(1)                              --------->ATHB51        -------->P        <------MYB83                                <---------ATHB51         ------>MYB46(1)       --------->MYB59                              <---------ATHB12  <---------ANAC58         <-----    --------->ARR14(2)                              --------->ICU4    <---------ANAC58     <---------DAG2    <---------ARR14(2)                  --------->YAB1  --------->AHL20(2)   ------>MYB83  <---------   aagttggatttggtcaagtcgtcagttctgaactatatcgaataagaaaactcaattatttattatcattttgcataccaacttgaagtacaactttttt  5130100                                                                        --------->ANAC46                     <---------YAB1                          ----------->GT1    --------->AHL20(2)                                      --------->DAG2    <---------AHL20(2)                  --------->WOX13(1)---------->DOF2 ------GT1        --------->WRKY18(1) <---------ATHB12 --------->AHL20(2) -DOF2      <----------DOF2 ---------->DOF2   --------->TOE2(3)       <-----------GT1   <---------ATHB12   cttcatttttatgtctttgggtcatgcttcaaaagttcaaatcattcacctaaacaaataaaaaggtaatataaactccatggtttagcaataactctca  5130200                                                                                   --------->ATHB12                                                                                   -------->ATHB1                                                                                   --------->ATHB51                                                                                   <---------ICU4                                                                                  --------->AHL20(2)                                                                                  <---------YAB1                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(1)                                                                                  --------->ICU4                                                                               <---------AHL20(2)                                                                              --------->AHL20(2)                                                                           ----------->GT1                                                                           <------ZmHOX2a(1)<--------                                          --------->RVE1(1)               ----------->GT1   ---------                                  --------->At4g35610                    <---------TOE2(3)  ---------            ----------->GT1       ----------->GT1   --------->ZAT18    ---------->DOF2      <--------     --------->YAB1 --------->MYB52(1)--------->AHL20(2)             <----------DOF2 <---------YAB1   ttttgtatcaaaattagttaaacaactgtgcaagagagcttaaaatatcacatgtgaactaaacaaaatagcttaaaggataaaattattagaagatact  5130300                                       --------->YAB1                          --------->CCA1(2)                         --------->ARR11(3)         ----------->GT1                     <---------AHL20(2)       ----------->GT1   <---------AHL20(1)        --------->DAG2     --------->DAG2   --------->AHL20(2)     ---------->DOF2     <---------AHL20(2)       ---------->DOF2    ---------->DOF2   <---------AHL20(2) -ARR14(2)            --------->YAB1  --------->AHL20(2)        -------->P   ----------->GT1 >ARR14(2)            --------->AHL20(2)  --------->YAB1        ------>MYB46(1) <-----------GT1 >ARR11(3)     ----------->GT1        <---------AHL20(2)        ------>MYB83 <---------ICU4<---------ICU4 -ARR11(3) --------->AHL20(2)        --------->AHL20(2)   <-----------GT1   --------->ICU4 <---------AHL20(2)   attttagtaaagataaaatgtgaataatatatgggctaaatttataatgctaaaaagtattaagcctaccaaaaagtaatagttacaaattaaatatttc  5130400           <---------AHL20(2)                                                --------->AHL20(2)           --------->AHL20(2)                                           ----------->GT1     <--------      --------->ICU4             --------->ZAT18                      <------ZmHOX2a(1)     ---------  <---------AHL20(2)        ---------->DOF2                     --------->DAG2             --------->MYB59  --------->AHL20(2)    <----------DOF2      <----------DOF2   ---------->DOF2   <-----------RAV1(1)   agaataaaatgattttattaaacgcgcttttaaagcgaacaaatattctttcggaccaaaaaaaaaaaaggaggaagaaaaaaatgttggagttagctct  5130500                                                                                              <------ZmHOX2a(2)                                                                                             --------                                                                                         ---------->DOF2                           <---------TOE1(1)                                      ----------->RAV1(1)                           <---------TOE2(1)                                   --------->ANAC58                   <----------DOF2                                             --------->ANAC58      *TSS      <-----------GT1                                           <------ZmHOX2a(1)  <-------  <----------DOF2  <---------DAG2                 <----------DOF2  ==================================HOX2a_HOX2a -At4g35610    --------->ZAT14             <---------ARR14(2)      <------ZmHOX2a(1)--------->ZAT6 >At4g35610    <---------ZAT14     ------>ZmHOX2a(1)      ---------->DOF2 ===========================HOX2a_HOX2a   gtttctttgttcatcagtttactttatggacgaggtcctcatgtagatttgactttgtttcaaagcggaggaagaaggagaaggcaacactaaaagatca  5130600         <----------DOF2        ------>ZmHOX2a(2)        <---------ANAC55(2)       <------ZmHOX2a(2)         <------MYB83      --------->AGP1             <------MYB46(1)                          <---------TOE1(2)      <---------AGP1             --------->ANAC55(2)                     ------>ZmHOX2a(1)      <---------ARR11(3)        --------->MYB59                          --------->HSFB2a(2)      --------->ARR11(3)        --------->MYB111(1)                     --------->TOE1(2)     <---------CCA1(2)          --------->MYB46(2)          <----------DOF2      <---------YAB1    ----------->ARR10    ----------->RAV1(2)                <---------DAG2<---------TOE2(2) --------->TOE1(3)       <-----------------AG              <---------ANAC58  --------->ARR11(3) --------->TOE1(2)       <-----------------AGL1            <---------ANAC58 <------ZmHOX2a(1)       < --------->TOE2(3)  <----------DOF2<--------P    --------->KAN4(1)  <---------At4g35610            <- ->ARR11(3)  <---------ANAC58 <---------MYB52(1)<---------KAN4(2)<---------At4g35610               -- --ARR11(3)  <---------ANAC58 <--------P     <---------TOE2(3)  <-----------RAV1(1)    <-----------GT1   aaaccttagatctttgcttacgctttcgcctggttaggtaagtgtttaagaatgttcaatggctttatgctgctcctaggattttgattttgcaattctc  5130700         ---------->DOF2   <------MYB83   ----------->GT1   <------MYB46(1)  --------->MYB111(1)  --------->MYB46(2)                                      ------>MYB46(1)  --------->MYB111(2)                                     ------>MYB83            <------MYB83  <---------MYB46(3)                                     <---------ALFIN1         <------MYB46(1) --- <--------P                                            --------->DEAR3(2)     --------->MYB52(2)  <-- <---------MYB55(1)         ---------->ID1            --------->PCF2      --------->ATHB12        --- -------GAMYB              <-----------GT1         ------>ZmHOX2a(2)     <---------YAB1           <-- --------MYB46(3) --------->HSFB2a(2)        --------->CCA1(2)         --------->YAB1        <------- ------->ATHB12   <---------HSFB2a(2)    --------->HSFB2a(2)        <---------CCA1(2)  <-----------GT1   ttggttggtaaaaaaggcttctgggtgtttttccttcttatttcgagatttgatcgaacccacttgatttctatcttgattagttggttttactagtgtt  5130800                                                                                         <----------DOF2                                                                                      --------->ARR11(3)                                                                            --------------->AGL15                                                                           ----------------->AGL3                                                              --------->ARR11(3)      <---------ARR11(3)                                                              <---------ARR11(3)      <---------ARR14(2)                                                     --------->ZAT6        <-----------------AGL3                                                    --------->At4g35610    ----------------->AGL2                                                    <---------At4g35610    ==========================                                             <---------ANAC55(2)           ----------------->AG                                             <---------ANAC55(1)    <---------HSFB2a(2) ------>ZmHOX2a(2)                                             <---------ANAC46 --------->ARR14(2)      --------->ARR14(2) ------>HSFB2a(2)                            <---------ANAC58 <---------ARR14(2)  --------->ALFIN1 -------ANAC55(2)                   --------->ARR14(2)       <---------GLK1(1) --------->DAG2      -- ------>ANAC55(2)        <---------GLK1(2)   <---------ANAC58--------->GLK1(1)---------->DOF2     <-- -------HSFB2a(2)      ----------->ARR10     --------->ANAC55(2)    --------->HSFB2a(2)<------ZmHOX2a(2) --ZAT6              <----------DOF2<---------ARR14(2)  --------->STY1(1)  ==========================   acagaacaatttgtgattttgggctttgattctctgcgaatatagttgcgtgttagctctagggtatcttctagcaaaccaaaagtgggatctttggttt  5130900              <-----------------AGL3              ----------------->AG              <-----------------AG              ----------------->AGL2              ----------------->AGL3        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->ARR11(3)      <---------ARR11(3)      --------->ARR14(2)      <---------ARR14(2)                                                                           <-      --------->ARR14(3)                                                                           <-      <---------ARR14(3)                                                                         <---     --------->GLK1(1)                                                     ----------->GT1     ------     <---------GLK1(1) <-------GAMYB   ----------->GT1       --------->GLK1(2)               ------>ZmHOX2a(2) ===============================MADS_MADS                <---------HSFB2a(2)               --------->ARR11(3) ------->YAB1 <-----------------AGL2   <----------ID1    --------->HSFB2a(2)               <---------ARR11(3) -------YAB1 <------ZmHOX2a(2)   ---------->DOF2   ------->TEIL      <---------YAB1      <---------YAB1 ===============================MADS_MADS   <---------AHL20(2)  <----------DOF2        --------->YAB1   atcatggagatctcgatccaatttcggttagaattcaaagaaggaaaaaattgaatctttgagaagcttttgttattgagttaattcagtgatgatccta  5131000  Previous    Next  AGI:  At5g15730.1    Description:  serine/threonine protein kinase, putative. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54590.2); similar to hypothetical protein [Cleome spinosa] (GB:ABD96839.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 5130506    to: 5133190    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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