Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->AHL20(1)                           --------->ARR11(3)                           <---------AHL20(2)                           --------->AHL20(2)                       <---------AHL20(2)                   --------->AHL20(2)                   <---------AHL20(2)               <----------DOF2              <---------DAG2            ---------->ID1 <---------AHL20(1)    --------->ANAC58                  ----------->GT1      --------->ARR11(3)--------->AHL20(2)       --------->ANAC46             --------->DAG2 ------ZAT6<-----------GT1 <---------ARR11(3)    --------->ANAC58            ---------->DOF2      ---   tcttaaatgattttgacctttttaaataatatattcaaatgtgtttcaaacacgaatcaaactataccaaaaaaaaaaaaaaagttggataaaaaataaa  5091800                                                                                                   <-                                                                                                   --                                                                                                 ----                                                                                  <---------AHL20(2)<                                                                                  --------->AHL20(2)-                                                                              --------->AHL20(2) <---                                                                              <---------AHL20(2) <---                                                                              <---------ICU4     ----                                                                              --------->ATHB51   <---                                     <---------AHL20(2)                      --------->ICU4      ----                                    <---------AHL20(1)                    --------->AHL20(2)    -----                                    <---------ARR11(3)                    <---------AHL20(2)    -----                                    --------->ARR11(3)                    --------->AHL20(1)    <----                                    --------->AHL20(1)                    <---------AHL20(1)    <----               <----------DOF2      --------->AHL20(2)                --------->AHL20(2)      -------         --------->TOE2(3)          <---------AHL20(2)                --------->AHL20(1)     <-------         --------->AtMYB61        ------->TEIL                    --------->AHL20(2)         --------        --------->ANAC46       <---------YAB1       --------->TOE2(3) <---------AHL20(2)    ---------      --------->REM1(1)   <---------ARR11(3)       <---------YAB1 <---------AHL20(2)        <--------      <---------ALFIN1    --------->ARR11(3)      --------->ARR11(3) <---------AHL20(2)     ---------     <---------ZAT14      --------->GLK1(2)       <---------ARR11(3) --------->AHL20(2) <---------AHL20(2) -------->RAV1(2)    <------ZmHOX2a(2)        <---------ICU4     --------->AHL20(2)    --------->AHL20(2)   acctgactacacctcaactttggatcaaaatctatgaatatattttcaaaattatcttagtcaaattttaaattaattaattatttatataaaatttaat  5091900         --------->TOE2(2)         --------->TOE1(2)         --------->TOE1(3)   --------->YAB1  <---------YAB1 --------YAB1 ------->ICU4 ---->HAHB4 ---------ICU4 -------->YAB1 -----HAHB4 -----ATHB1                                                           --------->YAB1 ----->YAB1                                           --------->AHL20(1) ------ICU4                                           --------->AHL20(2) ----->ATHB51                                         <---------AHL20(2) ---->ICU4                                            <---------AHL20(1) ---->AHL20(2)                                     --------->WOX13(1) <-----------GT1 -----ATHB51                                     <---------ATHB12    <---------YAB1    --------->ANAC55(2) -----YAB1                              <---------AHL20(2)         <--------HAHB4      --------->ANAC46 -->YAB1 --------->TOE2(3)             <---------AHL20(2)          --------->ATHB51   <---------LBD16 --AHL20(2)                --------->ZAT14   --------->AHL20(2)    <---------ICU4    <<<<<<<<<SPL1 ->AHL20(2)          <---------AHL20(2)--------->AHL20(2)         --------->ICU4     <<<<<<<<<SPL4 >AHL20(1)       <---------AHL20(2)    --------->AHL20(1)         <---------YAB1     <<<<<<<<<SPL5  - -AHL20(2)       --------->AHL20(2)    <---------AHL20(1) <---------AHL20(2)      <---------------AtSPL3 >AHL20(2)      --------->AHL20(2)    --------->AHL20(2)  --------->AHL20(2) --------->TOE2(3)   ----   aattatcataaccttggattaaatttatctacagtcaaaaattaattttaaatcaattaattaatagcattattacaatccctaattgtacgggacgaat  5092000                                                                                     <-----------HVH21                                                                                  ----------->RAV1(2)                                                                              ----------->HVH21                                                                           <-------MYC4                                                                           ------->MYC4                                                                           <-------MYC3          ----                                                                           ------->MYC2          <---                                                                           ------->MYC3        <-----                                                                           <-------MYC2        ------                                                                          --------->TGA1a      <-----                                                                          <---------O2         ------                                                                          <---------TGA1a <-------PIF4                                                                          --------->ANAC55(2) <------                                                                          <---------ANAC46<-------MYC2                                                                          <--------ABF1   ------->MYC2                                                                          --------->O2    ------->PIF5                                                                          <---------ANAC55(2) <------                                                                      <-----------HVH21   <-------MYC4                                      <----------DOF2                ----------->HVH21    <-------PIF5  ----------->GT1          <-----------GT1                         <---------At4g35610    ------->MYC3 --------->DAG2          <----------DOF2    --------->ATHB12       ----------->RAV1(2)    ------->PIF4 --------->DOF2      <----------DOF2  ==============================================bZIP_DOF  <------ ----->AHL20(2)  <---------ARR11(3)   <---------DAG2               --------->At4g35610    <-------MYC3   aaaaaagtagaaaactcaagttcctttctttaccatacagctttttcgattggagttgaataagtcttcatctgacacgtgtaaccctggcacatgccgt  5092100                   ----------->GT1                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)         ------->MYC3         <-------MYC2         <-------PIF5         ------->MYC2         ------->MYC4         <-------MYC4         ------->PIF5         ------->PIF4         --------->TOE1(2)         <-------MYC3        --------->ANAC55(2)        --------->TGA1a        <---------TGA1a        <---------ANAC55(2)                                                    ------>ZmHOX2a(2)        --------->O2                                                          <------ZmHOX2a(2)        <---------O2                                                      ------>ZmHOX2a(2)       ------------>OsbHLH66                                             <------ZmHOX2a(2) ----->ZAT14    --------->ARR14(2)                                      <---------ARR14(2) ------ZAT18    <---------ARR14(2) ------>MYB46(1)                      --------->ARR14(2) ----SPL7<-------PIF4    --------->WOX13(1)  <---------CCA1(2)       ------>NtERF2 >NtERF2====================================MYC_MYB              --------->DEAR3(1) ----RAP2.6(3)  <---------ARR11(3) ------>MYB83                  ----------->HVH21 --->ORA47(1)   --------->ARR11(3) -------->P<---------At4g35610 --------->At1g77200 ---ANAC46      <---------AGP1   --------->TOE2(2)              --------->MYB46(3) ---ANAC58      --------->AGP1   --------->TOE1(2)          *TSS--------->DEAR3(2) <---------CCA1(2) ---ANAC58--------->ALFIN1       --------->AtMYB61 <----------DOF2  --------->ANAC46   ccactaaaacacgtgcgagatctgtataaatcaaacctacgcgtttcatctctcttttcaaaactcaccgacgcgatccgatctcatctctctcatttcg  5092200                         <---------AtMYB61                  --------->ARR14(2)              <------NtERF2             --------->LBD16             ------>NtERF2<------MYB83             <---------ATERF1(1)            --------->ATERF1(2)            <---------DEAR3(1)            <---------ATERF1(2)            --------->DEAR3(1)         ------->TEIL     ---------->DOF2           --------->DEAR3(2)     --------->LBD16   --------->At4g35610           --------->ATERF1(1)  <---------LBD16     <---------At4g35610           <---------LBD16<------MYB46(1)         <---------MYB52(1)          <---------At4g35610 <---------SPL7     <-------GAMYB             <---------YAB1    --------->ATHB12    <---------MYB52(1) <---------ATERF1(1)           <---------ANAC58           <    <---------MYB46(3)<-----------RAV1(1) --------->ANAC46      --------->At4g35610     --------->YAB1   <---------YAB1 <---------ARR14(2)----------->HVH21<---------ANAC46    <---------ANAC58      ------   aaaccatggttgagccggcgaatactgttggtcttccggtgaacccgactccgttgctgaaagatgagctcgatatcgtgattccgactatcagaaacct  5092300                                                                <-------TEIL --------->CCA1(2)                                                               <------ZmHOX2a(2)                                                              --------->ARR14(2)                                                              --------->AGP1 <------ZmHOX2a(2)                                                              <---------ARR14(2)                                                              <---------ARR11(3)                                                       ===============HOX2a_HOX2a                                                       =============================HOX2a_HOX2a                                                       <------ZmHOX2a(1)    --------->ARR14(2)                                                      ----------->HVH21     <---------ARR11(3)                                                    --------->HSFB2a(2)     --------->ARR11(3)                                             --------->YAB1   --------->ARR11(3)       ----------->HVH21     ------>ZmHOX2a(1)                      <---------YAB1   <---------GLK1(1)    <-----------HVH21 ---------GLK1(1)    <----------DOF2   ----------->RAV1(2)   --------->GLK1(1)<-------TEIL<---------TOE1(3) --->TOE2(3) --------->ALFIN1   <---------DAG2      <---------HSFB2a(2)     <---------ARR14(2)   ----   cgatttcctcgagatgtggaggccttttcttcagccttaccatctgatcatcgtccaggacggagatccatcgaagaagatccatgtccctgaaggttac  5092400                                      --------->TOE2(1)                                      --------->TOE1(1)                                 <---------ARR14(2)                         <---------ANAC58                                 <---------ARR11(1)                         <---------ANAC58                                 --------->ARR14(2)                    --------->GLK1(2)                           --------->MYB52(1)                         --------->ARR14(2)                     ----------->RAV1(1)                              <---------GLK1(2)                    --------->ANAC58 ------>ZmHOX2a(1)             <---------TOE1(3)                <                    --------->ANAC58 <---------LBD16               <---------TOE2(3)          <------                 <------ZmHOX2a(1)  --------->TOE1(2)    ------->TEIL <---------ARR14(2)   <---------ANAC58            ----------->RAV1(1) <---------ARR14(1)      <---------CCA1(2) <---------YAB1   <---------ANAC58 ----->ZAT6--------->REM1(1)  ------->GAMYB         <---------ANAC46 <------ZmHOX2a(1) <----------DOF2   gactacgagctctacaacaggaacgacattaaccgaatcctcggacctaaggcttcttgtatctcgtttaaggattctgcttgtcgatgctttgggtaca  5092500                                                    <---------ANAC46                                                    <---------ANAC58                               ----------->TGA1--------->MYB52(2)                        <---------YAB1        <---------TOE2(2)                 --------->ARR14(2)           <---------TOE1(2)                 --------->ARR11(3)     <---------ANAC58                 <---------ARR11(3)     <---------ANAC58                               --------->ATHB12                 <---------ARR14(2)--------->ATHB12 <---------ANAC58                <---------ANAC58 ---------ANAC46<---------CCA1(2) <---------YAB1    <---------ANAC55(2)             <---------ANAC58 -TEIL      ----------->GT1  --------->YAB1  <---------MYB52(1)                   <---------YAB1   tggtgtctaagaagaagtatatcttcaccattgatgacgattgcttcgtaagttacttgaattttgagttttgtattcgtttttatgcttgatttgagag  5092600                       <---------MYB52(1)                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                                                   --------->ARR14(2)                  --------->ARR14(2)                                                   --------->ARR11(1)                  <---------AGP1                                                       <---------ARR14(2)                  <---------ARR14(2)                                                 <---------TOE1(2)                  <---------ARR11(3)                                                 <---------TOE2(2)                  --------->ARR11(3)                                              <---------ANAC46                  --------->AGP1                                         <---------ANAC58           <               >>>>>>>ZML2      <---------At4g35610         <-----------GT1       <---------ANAC58 --               <---------HSFB2a(2)                 <---------ANAC58      <---------ANAC58  <------MYB46(1)               --------->HSFC1(1)                  <---------ANAC46 --------->ATHB12 ----------->ARR10               <---------HSFC1(1)                  <---------ANAC58<-------TEIL   <---------ANAC58 <-               --------->HSFB2a(2)      <------------------------ANAC81  <---------ANAC46  <------MYB83   ttttgtcaattttggttctagatctgtttttttgagcttatttgtttgtgtttgtgtggatttttcaagttcattgcttgaatttcgtagatttggtgag  5092700  Previous    Next  AGI:  At5g15650.1    Description:  RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); alpha-1,4-glucan-protein synthase (UDP-forming). similar to RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1) [Arabidopsis thaliana] (TAIR:AT3G02230.1); similar to RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3), alpha-1,4-glucan-protein synthase (UDP-forming) [Arabidopsis thaliana] (TAIR:AT3G08900.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96930.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96835.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96890.1); contains InterPro domain Alpha-1,4-glucan-protein synthase, UDP-forming; (InterPro:IPR004901) Range:  from: 5092160    to: 5094497    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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