Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   <-----------HVH21 ----->YAB1 -----ATHB12                                                                                        - >MYB83                   --------->MYB46(3)                       --------->YAB1                <--- >MYB46(1)          ------>ZmHOX2a(1)                              --------->TOE2(3)         -------- -->WOX13(1)   <---------ZAT2                                      >>>>>>>>>RAP2.2           <------- -------->AGL1 <---------At4g35610                          <---------At4g35610              <------- ->AtSPL8     --------->ANAC58                              --------->At4g35610             <-------- --AtSPL8     --------->ANAC58                           <------ZmHOX2a(1)     ---------->DOF2 <-----   cagggtcatatggagcaagctccttcaaacgaccagtcttcacaatgtctgtccatagaggaagctcaatctaaatcagacaaaagagacaactattatt  5037800                           --------->ZAT6 -------->At5g28300     --------->YAB1 ------At5g28300       <---------ATHB12                 --------->ZAT6 ->YAB1                <---------YAB1          --------->YAB1 --ICU4           ------>NtERF2               <---------ATHB12 -HAHB4        <---------At4g35610          --------->WOX13(1)           ------>ZmHOX2a(1) -YAB1         --------->ZAT2            --------->GLK1(2)              --------->TOE2(3) ----YAB1      --------->At4g35610      <---------GLK1(2)       <-----------GT1   acagtgaatttccaattagctgcctatgatcactaacatcaagaatctatcatttctatctctatttctctcttcctcagtcgttttatagtattcaatg  5037900                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             ========                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                           <---------TGA2(2)                                                                                     <----------DOF2                                                                                     ================                                                                                     ------>ZmHOX2a(1)                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 <---------GLK1(2)                                                                                 <---------ARR11(3)                                     --------->At4g35610                         --------->ARR11(3)                                     <---------At4g35610                         <---------ARR14(2)              <---------ALFIN1       --------->HSFC1(2)                          --------->AGP1  <---             ------>MYB83            <---------HSFC1(2)                    <---------ICU4 -----------             ------>MYB46(1)         --------->HSFB2a(1)                  --------->ICU4  -----------            ----------->RAV1(1)      --------->ZAT2            ------>ZmHOX2a(1) --------->ARR14(2)           --------->AtMYB61         <---------HSFB2a(1)       ===========================HOX2a_HOX2a        --------->ANAC46           <---------GLK1(2)           ==========================HOX2a_HOX2a   cctcaaaatcacaccaacacattgaactacaatatcagaagctccctcaaactctcaattgtttcctctaaaactcattatcagatccttttgtgacgtc  5038000  <---------GLK1(2) --ANAC58 --bZIP60(1) --ANAC46 ->ANAC55(2) =======bZIP_DOF --TGA1a ->TGA2(1) --TGA2(1) --bZIP60(2)                                                     <----------DOF2 ->bZIP60(1)                                                    <---------ANAC58 ->TGA1a            --------->YAB1                              <---------ANAC58 ->O2    ----------->RAV1(2)                                  ------>ZmHOX2a(2) --O2    --------->At4g35610                                 <------ZmHOX2a(2)            --------->ANAC46 --ANAC58<---------At4g35610                             <---------HSFB2a(2)              --------->ANAC58 -->STF1 --------->ZAT2                                  --------->HSFB2a(2)              --------->ANAC55(2) ==bZIP_DOF        <---------ATHB12               -------->P--------->ARR14(2)    --------->ANAC58 -------DOF2     --------->WOX13(1)          --------->ZAT6 <---------ARR14(2)    --------->ANAC58 >HVH21  <---------ZAT2            --------->ANAC58  <----------DOF2             --------->SPL7 >TGA1 <-----------RAV1(2)         --------->ANAC58 <---------DAG2   <---------At4g35610  --------->ANAC58   tttcgattctcagctgaatcaatcaaacttgagagagaagcatcaaaacactaacctttccagatcgcttgaggtgagaagcgtaagccttcacgaaatc  5038100                                        --------->ANAC58                <---------At5g28300     --------->ANAC58                   *TSS            <----------DOF2             --------->ANAC46           --------->ARR11(3)         --------->ARR11(3)   --------->RAP2.6(2)   <---------MYB52(1)<----------DOF2         <---------ARR11(3)--------->ANAC46 <---------ATHB12--------->ANAC58                       <-  <------ZmHOX2a(1)    <-----------GT1<-----------GT1       --------->ANAC58                   <----- ----------->GT1<---------LBD16 <------NtERF2      <-------GAMYB   <---------ARR11(3)  ---------->DOF2   gtgaggagaaacatctttcacggttttaccagtcgccatttcacgaatcactccgttaagttaagccaagagctttcaattttcagtcacaaagtctata  5038200                                                                  <-----------------AGL1                                                                  <-----------------AGL2                                                                 >>>>>>>>>MYB98                                                               ----------->HVH21                                                              <---------MYB46(2)                        <---------TOE1(3)                   --------->LBD16                   --------->WOX13(1)                       ------>NtERF2          ------------>CBF                           --------->DEAR3(2)         --------->ANAC58                           --------->ARR14(2)                            <--         --------->ANAC58                           <---------ARR14(2) --------->ATHB51        <-----        --------->WOX13(1)                    ------->TEIL --------->ANAC58                   <------      ------------>CBF  <---------TOE2(3)   --------->ZAT14--------->ANAC58       <---------AHL20(2) --------CCA1(2) ------------>CBF         --------->ANAC46--------->MYB46(3)     --------->AHL20(2)<- ------TBP<---------ATHB12       <---------LBD16    <-----------ARR10 --------->ICU4       ----------   tatatctgagcaatcaattttcaattagggtttttttcggacacactgaacccgaatcgacccgcctaacccattatgggccattaaatctatttaagcg  5038300                                           <---------YAB1                                         -------->ATHB1                                         <---------AHL20(2)                                         <---------ICU4                                         --------->ATHB51                                         <--------HAHB4                                         --------->YAB1    --------->ANAC58                     -------->HAHB4    --------->ANAC46                    --------->ICU4    --------->ANAC58                 --------->ICU4 --------->ARR14(2)                --------->TOE2(3)                        --------->CCA1(2) <---------ARR14(2)           --------->ZAT14                              --------->ARR11(3) -------ANAC46                <---------ZAT14 <---------YAB1         --------->YAB1 ----RAP2.6(2)           --------->ZAT14<---------YAB1      ----------->GT1<---------ARR11(3)  ------ ---At4g35610            <---------ZAT14<---------ATHB51  ---------->DOF2----------->ARR10  --------- ---------DOF2      ---------->DOF2--------->YAB1  <---------At4g35610 --------->CCA1(2)    --------- >DOF2         ----------->GT1<---------ZAT18<---------AHL20(2)   ---------->DOF2           ---------   gcttatacgctccgtttcagttaaaagtgtagttcagtcttaattattattttagctactgaaagttataaagataagatatgtttttgaccagaagcca  5038400                                                      ------>MYB46(1)                                                      <---------ARR14(2)                                                      ------>MYB83                                                      --------->ARR14(2)                                                    <---------MYB111(2)        --------->YAB1                                                  ------>NtERF2              ------>MYB46(1)                                                 <---------ALFIN1            ------>MYB83       <----                      --------->ANAC58        --------->ANAC46         ----------->HVH21     <------- ----->RAV1(1)        --------->ANAC58      <-----------GT1          <---------TGA1a         -------- >ANAC46     ----------->GT1              =====================================bZIP_DOF      <------- >ANAC58 <---------At4g35610              --------->AHL20(2)       --------->ZAT14     --------->AHL20(1) >ANAC58 --------->At4g35610              ---------->DOF2          <---------ZAT14--------->AHL20(2)   cagacaagtttagctgagtaaaaaacgcatggtcttgtcttcaataaaaccccacctatctgcatttactgaagtgaccaactataaaatatgttaagtg  5038500    <---------ARR11(3)    --------->ARR14(2)    <---------ARR14(2)    --------->ARR11(3)              <---------YAB1 -------HVH21                     <---------ICU4       ---------->DOF2----------->GT1 --ANAC55(1)                     --------->ICU4    <------ZmHOX2a(2)<---------GLK1(1) ->ANAC55(2)         --------->ARR11(3)     --------->ATHB12  <-------GAMYB                      <--- --ANAC55(2)        <---------CCA1(2)      <---------ATHB12  <-----------RAV1(1)     <---------At4g35610   tcactggatattgttgagttttaaatcttgcagacattatgaccaaagattggatcaaaaagactgttggatttgtgaaacaaatgcagattacatggag  5038600                               ----------->GT1                        XXXXXXXXXXXXXXXXXXXX>MIR4240                      <---------CCA1(2)                      <---------MYB46(3)                             <---------ARR11(3)                    <---------MYB52(1)                     <---------ARR11(3)                   --------->LBD16            --------->At4g35610    --------->ARR11(3)            <-                  <---------ANAC46            <---------At4g35610   <---------CCA1(2)     <---------ANAC46       ---------->DOF2--------->ATHB12 <-------MYC3        --------->ARR11(3)        <------------CBF ---NtERF2       <---------LBD16       ------->MYC3       <---------CCA1(2)<---------ARR11(3)    <---   gcaatctctgaaagactgttccggtgattagaccagtaacacatgtatagctgaacacacatatctatacatatctatatctatctatattggtgtattt  5038700  Previous    Next  AGI:  At5g15520.1    Description:  40S ribosomal protein S19 (RPS19B). Identical to 40S ribosomal protein S19-2 (RPS19B) [Arabidopsis Thaliana] (GB:Q9LF30); similar to 40S ribosomal protein S19 (RPS19A) [Arabidopsis thaliana] (TAIR:AT3G02080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83920.1); contains InterPro domain Ribosomal protein S19e; (InterPro:IPR001266) Range:  from: 5037024    to: 5038175    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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