Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->YAB1                                                <----                            <-------TEIL--------->TOE2(3)                                       <----                           --------->CCA1(2)                                                   ------                    <-----------GT1  <-----------GT1           ---------->DOF2             <---------ICU4            --------->CCA1(2)    <---------YAB1      --------->ATHB12  <---------HSFB2a(2)<---------YAB1           <---------ARR11(3)<---------ANAC55(2)    --------->ICU4  <----------DOF2     --------->YAB1           --------->ARR14(2)--------->ANAC55(2)   <---------WOX13(1)  --------->HSFB2a(2)--------->ICU4   atactatctccaagatttgaatttactagatacatattataacattagttcggattgattagagctaaagcttttggaaaaaactaagaaacataattaa  5033100                         ------->TEIL                         --------->SPL7                       <---------SPL7                      <---------ANAC58                      --------->ANAC58                      <---------ANAC58                      --------->ANAC58                      --------->ANAC55(2)                     --------------->AtSPL8                     ------->TEIL                     --------------->AtSPL3                   --------->ZAT18                   <---------ZAT18                              --------->TOE2(3) <-------TEIL      <---------ZAT14   <----------DOF2            --------->TOE1(3) -----TOE1(3)    <---------------AtSPL8                       ------->TEIL -----TOE2(3)    <---------------AtSPL3                       -------->P                    --------- --->MYB52(1)   ----------------------->TaNAC69(2)         <------ZmHOX2a(2)        -------->P<------   gggttcaacaaaataagtgagtgtacgtaccatgtctccctttaatacgaacaagacttggatcaaccttaactacttcaagtactaaccagaagtgacc  5033200                --------->MYB52(1)   <---------MYB52(1)               ----------->HVH21    <----------DOF2             --------->ALFIN1     <------NtERF2           <---------ANAC46      ------>NtERF2     <---------DEAR3(1)          <---------RAP2.3(1)     --------->ANAC46           <---------DEAR3(1)    <---------LBD16            --------->ATERF1(1)                      <---------ICU4   <---------ALFIN1            <---------MYB52(1)         ----------->GT1     <---------AtLEC2 -->HVH21 <-----------------------TaNAC69(2)        ---------->DOF2    <---------YAB1 ---At5g28300<---------REM1(1)<-----------HVH21--------->LBD16      <-------TEIL               <-----   gtgttccacggcgaggtgtaacggtgtaagtccgtcggcgttaagtttccgagcaaaagatggtttcaagttcatcatttccatggcaaactctgttttt  5033300                                               <------MYB83                                              <---------DEAR3(1)                                             <---------------------WRI1                                             <---------ORA47(1)                                          --------->ALFIN1                                         <-------MYC3                                         ------->PIF4                                         <-------PIF4                                         <-------PIF5                                         ------->MYC3              <-------MYC3               <-------MYC4              ------->MYC3               ------->MYC4             <---------O2                ------->PIF5             --------->O2                <-------MYC2         ------>NtERF2                   ------->MYC2        <---------ATERF1(1)             --------->ANAC55(2)      --------->ATERF1(1)               <---------ANAC55(2)      <---------At4g35610               <---------TGA1a      --------->At4g35610               --------->TGA1a     <---------RAP2.3(1)                --------->O2     ------>NtERF2                   ---------------->PIF3(2)            <---------AtLEC2    <---------RAP2.3(3)              --------->ZAT18                  ------>ZmHOX2a(2)    <---------RAP2.3(2)              <---------ZAT18                <---------ARR14(2)    <---------RAP2.6(2)          --------->MYB52(1)                 <---------ARR11(3)   --------->RAP2.6(3)       --------->MYB52(1)<------MYB46(1)      --------->ARR14(2) ----------->HVH21     ----------->GT1  <---------O2                --------->ARR11(3) --------->WRKY12     <------ZmHOX2a(1)------------>OsbHLH66  <---------SPL7 ------GT1 ----------->RAV1(1)<---------TOE2(3)<---------DEAR3(2)   ------->TEIL     <---------ANAC46   ccattgacggctgccacatggagaggagtattaacgaagggcacgtggtcggttttatcaagaacgtatggatcttcatggattagttcgtatagtagat  5033400                    <---------HSFC1(2)                 --------->At4g35610                 <---------At4g35610              --------->At4g35610              <---------At4g35610         --------->ARR14(2)         <---------ARR14(2)       --------->LBD16      <---------------AGL15      --------->HSFB2a(2)        <----------DOF2      --------------->AGL15     ------>ZmHOX2a(2)      <---------HSFB2a(2)      <---------YAB1                                                <-------     ----------------->AGL3   <---------ARR11(3)                                            ---------     ----------------->AGL1   --------->ARR11(3)                                 <---------AHL20(2)     <-----------------AGL2  --------->YAB1                                   <---------AHL20(2)     ----------------->AGL2 <---------ATHB12                                  --------->AHL20(1)   <-----------GT1  --------->HSFC1(2)                                        <---------AHL20(1)   -- --------->HSFC1(2) <---------At4g35610                                      --------->AHL20(2)   <-- <---------HSFC1(2) --------->At4g35610   <---------MYB52(1)                 --------->YAB1 <--------   cgatgtttccagatttagcagcagcttctaatgatctttggtccattagtgactcaagagaacagaacgacgatgcgaattatatttttggtgattaaat  5033500                                                                                                    <                                                                                                    -                                                                                                  ---                                                                                             --------                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC55(2)                                                                                           --------->bZIP60(1)                                                                                           <---------ANAC46                                                                                           >>>>>>>>>>HY5                                                                                           <---------ANAC58                                                                    =================================bZIP_DOF                                                                    ---------->DOF2        <---------ANAC55(1)                                                              ---------->DOF2              --------->O2                                                              =======================================bZIP_DOF                                                         --------------->AGL15             <---------O2                                                         <---------------AGL15             <---------TGA1a                                                        ----------------->AGL3             <---------ANAC58         --------->TOE2(3)                              ----------------->AGL2             --------->TGA1a    <---------YAB1                                      ----------------->AGL1             <---------bZIP60(2)   *TSS------->TEIL        --------->YAB1               ----------------->AG               <---------bZIP60(1) <---------YAB1           --------->ICU4            --------->HSFB2a(1)                   ----------- --------->ICU4      --------->ANAC46               <---------HSFB2a(1)                  <---------TGA2(2) --AHL20(2)          --------->ANAC58               <---------HSFC1(2)                  ----------->TGA1 >AHL20(2)           --------->ANAC58               --------->HSFC1(2)                  ----------->HVH21 ------->YAB1 <---------WOX13(1)                   --------->HSFB2a(1)     ----------->GT1----------- -------YAB1 <------------CBF                      <---------HSFB2a(1)    --------->ALFIN1----------- -AHL20(2)  --------->ATHB12                   <---------TOE2(3) <----------ID1        <-----------HVH21   atgatgatgaaacttaattggctacgaaatgataactcgtttgtgaatgaaggaagttcccaaaaaaaggaaaagagtgggaaattataggtgacgtggc  5033600                  --------->GLK1(2)                  <-----------ARR10           --------->O2           <---------O2           --------->ANAC58           --------->TGA1a           --------->bZIP60(2)           <---------TGA1a           --------->ANAC58           --------->ANAC55(2)           --------->ANAC46   <---------ANAC58   <---------ANAC46          <---------AHL20(2)   <---------ANAC58     <---------YAB1                        <---------ICU4 ---------ARR14(2)<---------ARR14(2)                          -------->ATHB1                      <-- -------->ARR14(2)<---------ARR11(3)                          --------->ATHB51                    --- -------------------->TaNAC69(2)                              --------->ATHB12                   <--- ->ALFIN1  <---------ANAC55(2)                               --------->ICU4               <---------ANAC46 >bZIP911(1)      --------->ARR14(2)  <---------MYB46(3)     <---------YAB1          <---------ANAC46 >bZIP910(1)<-----------TGA1--------->AHL20(2)             <---------ICU4            <---------bZIP60(2) >STF1     --------->ANAC55(1)     --------->MYB52(1)   --------->YAB1            ----------->HVH21--   agtatacgtggacacgtcagtatctgatcatttaatccaacggttgatattagataaataagaattattgtctgaaaatttgatgtgacatggagtacaa  5033700                                                                                        --------->TGA1a                                                                                        >>>>>>>>>>HY5                                                                                        <---------bZIP60(2)                                                                                        <---------bZIP60(1)                                                                                        <---------TGA1a                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC55(1)                                                                                        --------->ANAC55(2)        --------->RAP2.6(3)                                                             <---------ANAC55(2)       <---------ARR14(2)                   ----------->GT1                             <---------ANAC46       --------->ARR14(2)                  <---------------AtSPL8                       --------->bZIP60(1)    --------->YAB1                         --------------->AtSPL8                       <---------O2   <------ZmHOX2a(2)                      >>>>>>>>>ARR1          =================================bZIP_DOF -----MYC3                                >>>>>>>>>ARR2          ---------->DOF2        --------->O2 ---->MYC3 --------->At4g35610          <---------YAB1        --------->At4g35610      ----------->STF1 ------ANAC46------>NtERF2              <---------TOE2(3)     <---------At4g35610    ----------->HVH21 ------->ALFIN1               ------>ZmHOX2a(2)       <-----------GT1--------->ALFIN1----------->TGA1   cgtggatcatatcggctccagcatctatttgatctaatggctaagattgtacaaaataactcgctgctaaagtgttgaaattcggatgtgacgtggcatt  5033800                         --------->AHL20(2)                         <---------AHL20(2)                       --------->TOE2(3)                              <-----------GT1                      <--------HAHB4                              <---------AHL20(2)                      --------->YAB1                              --------->AHL20(2)                      --------->ATHB12                         --------->AHL20(2)                      <---------ICU4                           <---------AHL20(2)                     <---------YAB1                            <---------ICU4                     <---------ATHB12                          --------->ATHB51                     --------->ICU4                           <---------YAB1                   <---------ICU4                           <---------ICU4                          -                   --------->YAB1                           --------->YAB1                         <-                  <---------YAB1                           <---------AHL20(2)                   -----                  --------->ICU4                           --------->AHL20(2)                  ------                <---------ICU4                        <------ZmHOX2a(1)                     <--------                --------->YAB1            ------->GAMYB    --------->ICU4                   ---------               <---------YAB1          --------->MYB52(1)  <---------ATHB51                --------->AHL20(2)        --------->AHL20(2)         --------->GLK1(2) ----------->GT1 <---------YAB1       <---------YAB1        <---------AHL20(2)<---------AHL20(2) <-----------------AGL1<---------AHL20(2)   <---------AHL20(2) <-------MYC3--------->YAB1     ------------>CBF    --------->MYB59<---------ICU4      <---------AHL20(2) ------->MYC3<---------ICU4    <-----------GT1 --------->ICU4 --------->ICU4           --------->AHL20(2)   aaacgtggattaaaatcatcataatcattaatttgacaatctaacggacaagattaggaaaataattatttattactaatctaagtttatttattaaaaa  5033900                                                 <-----------HVH21                                             --------->MYB52(1)                                           --------->LBD16                                           ------>NtERF2                                           <------NtERF2                                          --------->RAP2.6(2)                                          --------->RAP2.3(2)                                          --------->RAP2.3(3)                                          --------->ANAC58                                          --------->RRTF1(2)                                          --------->RRTF1(3)                                          --------->ANAC58                                          --------->ANAC46                                          --------->DEAR3(1)                                         <---------LBD16                                         --------->ERF1                                         <------NtERF2                                         --------->RRTF1(1)     ---------->DOF2                     --------->RAP2.3(1)       <-----------ARR10 ---------->RAV1(1)                     <---------ATERF1(1)        <---------ARR11(1) ---------ID1                          <---------DEAR3(1)         <---------CCA1(2) ---->DAG2          <---------YAB1    --------->ZAT18           <---------ALFIN1        ------------>CBF ---->DOF2       --------->ICU4  ---------->DOF2------->GAMYB  --------->LBD16         <-----------GT1 -AHL20(2)       <---------MYB52(1)   <---------ABI4(2)    XXXXXXXXXXXXXXXXXXXX>MIR865-3P >AHL20(2)      <---------RAP2.6(3)---------->DOF2        <-----------GT1    <---------YAB1   -------   agcaccaaaaagactagccgttattagagagcgtccaaagagcgccgcaacggtcacatttttcccccaaatctatcttcttattcgatttacaatactc  5034000  Previous    Next  AGI:  At5g15500.1    Description:  ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G10720.1); similar to Ankyrin [Medicago truncatula] (GB:ABO82122.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 5031679    to: 5033503    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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