Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------ALFIN1                          ------>NtERF2                          --------->LBD16                                                ---------->DOF2                         --------->ANAC58                                         ----------->GT1 -----ZAT18              --------->ANAC58                                 --------->ANAC58 ---->ZAT18              --------->ANAC46                                 --------->ANAC46 -----ZAT14           --------->ARR14(2)             ----------------->AGL3   <---------------------- ---->ZAT14           <---------ARR14(2)       <-----------HVH21          --------->ANAC58         --   cactcttagacaatagaatcaaacaatccgccacttctaattcttcatcagtcgcatcaaaaatagaactcggttcaagaaacgtagtaaataaagtctt  5026800      ------>MYB46(1)      -------->P      ------>MYB83           <<<<<<<<<TBF1    <---------MYB59 <----------DOF2                                             --------->HSFB2a(1)    <---------MYB111(1)   <<<<<<<<<TBF1                             <---------ARR14(2)  --------->AGP1 <---------ARR11(3)                                 <---------GLK1(2)     <---------DEAR3(1) -TaNAC69(2)     --------->ARR11(3)                                 --------->ARR14(2)   --------->SPL7 ------->HSFB2a(2) ------>ZmHOX2a(2)                             <---------TOE2(3)     <---------SPL7   cccagacctaccaagtcttgatcttttcttcttcttcacaaacccaaggctacgagacagagtcatcaaggattcttcacaaaccttctcgttcggcgat  5026900                                                                                            <--------                                                                                           <---------LBD16                                   <---------SPL7                                        --------->ARR14(2)                                  --------->TOE2(1)                                      <---------ARR14(2)                                  --------->TOE1(1)                                    <---------MYB46(3)                          <---------AHL20(1)                                       --------->ATHB12                          <---------AHL20(2)                               --------->GLK1(2)---------                          --------->AHL20(1)   <----------DOF2             --------->ARR14(3)     ---                       --------->AHL20(2)      <---------DAG2              --------->ARR11(3)   -----                    --------->TOE2(3)--------->SPL7                        <---------ARR11(3)   <----                  <---------YAB1 <---------------AtSPL3                    --------->ARR14(2)   -----               --------->ICU4    --------->HSFB2a(2)                       <---------ARR14(3)-------- <-------TEIL  <---------YAB1    <---------HSFB2a(2)   <---------GLK1(2)   <-----------ARR10<--------   aaatgcatcatcgagcgatgattcttaaaatatttctcgtaccgaaacccttttccacattcttcgcatcgaaacaaaatcttcttcattggttccggag  5027000                                                            --------->MYB55(2)                                                            <---------MYB46(3)                                                         <-------GAMYB                                                        <---------MYB46(3)   <---------TOE1(2)                             --------->ARR11(3)  ------>ZmHOX2a(1)                              <---------ARR11(3)  --------->LBD16                           <---------MYB52(2) <---------LBD16                           --------->ANAC46 <---------DEAR3(2) -HSFB2a(2)                                --------->ANAC55(2) >HSFB2a(2)                                --------->ANAC58 <------MYB83 ------>GLK1(2)                            --------->ANAC58 <------MYB46(1) ---->HSFB2a(1)                            --------->ANAC55(1)         <----------DOF2 -----HSFB2a(1)                            <---------ANAC55(2)  <---------ANAC46 ---->HSFC1(2)                             ----------->GT1<---------MYB52(1) ->LBD16                            --------->YAB1      <-----------RAV1(1)             ----------->HVH21 -ANAC46    <<<<<<<<<TBF1  <---------MYB52(1) <-----------GT1  <-------TEIL       <----------DOF2  --   attcctgggttttcttcttcgagttttcccttagaccatagtaacaagtaacatcttgctgttggttcgtagacttttctgtttctttctgtgaccgagt  5027100                                        <------ZmHOX2a(2)                                       <---------ARR14(3)                                       <---------ARR14(2)                                       --------->AGP1                                       --------->ARR14(3)                                       <---------ARR11(3)                                       --------->ARR14(2)                                       --------->ARR11(3)                   <-----------------AGL3                                   --------->ANAC46                   ----------------->AGL3------>ZmHOX2a(2)                 <---------LBD16          --------->ANAC58            <---------GLK1(1)            <------NtERF2          ---------->DOF2          --------->ANAC58            --------->GLK1(1)            --------->ANAC58 <-------GAMYB      --------->ARR11(3)             ----------->ARR10             --------->ANAC58<---------MYB46(3) ------->ICU4---------->DOF2  <----------DOF2    <-------TEIL     ------>NtERF2    --------->MYB52(2)   aatcttgaggtctcgcaaagctccattaatgggtttatggagatcttgatgttcgtcttccatttaggcgcgaaatacacggggtttgttgataaagaag  5027200                                                    ------->GAMYB                       <---------At4g35610         <---------MYB52(2)                      <-------TEIL                 --------->MYB46(3)                     <--------P                  ----------->RAV1(1)                   <---------ANAC46             <----------ID1           <---------YAB1                  <---------TOE2(3)           --------->ANAC58        --------->ICU4             --------->ICU4               --------->ANAC58 --------->ANAC46           --------->MYB52(1)             --------->ANAC58 --------->ANAC58            --------->At4g35610           <---------DOF5.7(2)            <---------TOE2(3)--------->ANAC58---------->DOF2  <--------       <---------TOE1(3)    <---------REM1(1) --------->ANAC58 --------->LBD16         <---------At4g35610       <---------TOE2(3)    <---------ANAC46<------ZmHOX2a(1) --------->RAP2.6(2)  <-----------HVH21   aagtcgatgaaggtaacgatgaggtagatgatgtagagacagataaggaagcaacaaacacaagccggactcattatcaaagaactatcagatgaattga  5027300                                     <---------HSFB2a(2)                                     --------->HSFB2a(2)                                     --------->LBD16                                 --------->ARR14(2)                                 ------->TEIL                                 <---------ARR14(2)                                <---------CCA1(2)                              <---------ANAC55(2)                              --------->ANAC55(1)                              --------->ANAC55(2)                              ===============================bZIP_DOF                              --------->ANAC58                              --------->ANAC58                              --------->TGA1a                                                    <---                              <---------O2                                                       ----                              --------->O2                                                     <-----                              ===============================bZIP_DOF                          ------                              <---------TGA1a                                               ---------                          <-----------HVH21                    <------NtERF2               --------->DAG2     ===================================bZIP_DOF             <---------DEAR3(1)            <---------     ---------->DOF2   <---------ANAC46                      <---------ANAC46             --------->DAG2 ---------->DOF2       <---------ANAC58                    <-----------HVH21             ---------->DOF2 =======================================bZIP_DOF      ---------->DOF2              ---------->DOF2 ----CBF               <---------ANAC58           ---------->DOF2             <----------DOF2 <------   agaaaaagaaagtttatgctctgtttcttgtcacgtatccgagaaaaactgagaaagaaagcgtcggagaaacagtgaagctttagaaagaaaaaggtag  5027400 ------ARR14(2) ----->ARR14(2)                                    --------->LBD16        <-----------TGA1 --TEIL                                           --------->HSFB2a(2)    --------->bZIP60(1) ----->ARR10                        --------->GLK1(2)                    <---------bZIP60(1) -->GT1                     <----------DOF2       <---------HSFB2a(2)    --------->ANAC55(2) ------AtSPL8            <---------ARR11(3)      <---------LBD16       <-----------GT1<------NtERF2 --P                     --------->ARR11(3)     <---------LBD16        --------->MYB52(1)   atactatcgaatcaaacgaagaatacaaatcttttgagtttctgtgatttttcgggagaacaagtgagcgaagtaacgtcatgaagggggcattttagta  5027500                                                          --------->YAB1                                                         <---------ATHB12                --------->AHL20(2)                                                       --------->WOX13(1)                <---------AHL20(2)                                                  ------->MYC3                        --------->AHL20(1)                                                  <-------MYC3                ----------->GT1      <-                                                 --------->O2             --------->ATHB12 <---------                                          <---------HSFB2a(1)        <---------ANAC46 --------->AHL20(2)                 --------->At4g35610      <---------HSFC1(2)        --------->LBD16   <---------AHL20(2)        ---------->DOF2                   --------->HSFB2a(1)       ------>NtERF2    --------->AHL20(2)     --------->ANAC58                     --------->HSFC1(2)<---------ANAC55(2)    --------->YAB1  --     --------->ANAC58             <-----------GT1<---------O2    --------->At4g35610 <---------AHL20(2)   aatcgtcaagaaaagagggagcgaaaactttggttttaactagaagtttccatgtggcaatcacatgagccgcgagtaattggaaaaataatttaacaga  5027600          <----------DOF2        --------------->AGL15        <---------------AGL15     <-----------GT1                                         ----------->GT1  <----------DOF2     --------->ZAT14                      ---------->DOF2 --------ARR11(3)     --------->ZAT18                    <---------YAB1 --GT1 <-----------------AGL3                         <---------AHL20(2)  --------->DAG2          --- ------->ARR11(3)     <---------ZAT14          <----------DOF2           ---------->DOF2          ---   acatcttttactctttttagtaactgcagtagaaatcaacttgggaaaacttttatattatgaaagtaatattcgaaaagcttacaatatttgataaccc  5027700  Previous    Next  AGI:  At5g15480.1    Description:  zinc finger (C2H2 type) family protein. similar to nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01030.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 5025955    to: 5027163    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g15490.1    Description:  UDP-glucose 6-dehydrogenase, putative. similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G29360.1); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G39320.1); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G29360.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN62897.1); similar to putative UDP-glucose dehydrogenase 1 [Nicotiana tabacum] (GB:AAT40105.1); similar to putative UDP-glucose dehydrogenase 2 [Nicotiana tabacum] (GB:AAT40106.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogena Range:  from: 5027642    to: 5030197    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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